UHGV-1361483 (vOTU-055112)

Viral Genome: UHGV-1361483

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1361483
vOTU ID	vOTU-055112
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0271701
Associated BioSample	SAMEA2784482
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9746
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	47.41
Jumbo phage	No

Genome content
Genome length (bp)	40,563
GC content	44.29%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	52
CDS density	90%
Average CDS length (bps)	704.19
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1361483_2	K18830	52.0	0.000000000000015	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1361483_2	phrog_8	43.5	0.0000000000068	transcriptional regulator	transcription regulation
UniRef90	UHGV-1361483_2	UniRef90_UPI001D06DE8F	206.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1361483_2	610130.Closa_0705	159.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1361483_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1361483_2	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1361483_2	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1361483_11	phrog_3584	143.3	1.69978e-42	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361483_11	UniRef90_UPI001D0EB55A	296.0	0	helitron helicase-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1361483_11	483218.BACPEC_01173	186.0	0	N/A	N/A
structural_annotation	UHGV-1361483_11	PF21578,NF041486	N/A	N/A	N/A	N/A
PHROG	UHGV-1361483_12	phrog_531	48.8	0.00000000000011	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361483_12	UniRef90_A0A1C5RDL1	223.0	0	Ribonuclease H	N/A
eggNOG-mapper	UHGV-1361483_12	411461.DORFOR_01140	100.0	6.19e-25	RNA-DNA hybrid ribonuclease activity	N/A
COG	UHGV-1361483_12	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-1361483_12	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
KOfam	UHGV-1361483_13	K03496	196.1	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-1361483_13	phrog_164	162.2	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361483_13	UniRef90_A0A1C5REE7	435.0	0	Sporulation initiation inhibitor protein soj	N/A
eggNOG-mapper	UHGV-1361483_13	97139.C824_00725	278.0	0	Cellulose biosynthesis protein BcsQ	N/A
Pfam	UHGV-1361483_13	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-1361483_13	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-1361483_13	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-1361483_14	K03497	73.2	5.4e-21	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1361483_14	phrog_15077	190.8	0	N/A	unknown function
UniRef90	UHGV-1361483_14	UniRef90_A0A564VJH8	744.0	0	ParB-like nuclease domain protein	N/A
eggNOG-mapper	UHGV-1361483_14	742765.HMPREF9457_02110	147.0	2.35e-34	N/A	N/A
Pfam	UHGV-1361483_14	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
structural_annotation	UHGV-1361483_14	PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1361483_15	1298920.KI911353_gene4860	49.7	0.00000396	N/A	N/A
PHROG	UHGV-1361483_16	phrog_7566	103.9	7.1e-31	N/A	unknown function
eggNOG-mapper	UHGV-1361483_16	411459.RUMOBE_00948	185.0	0	N/A	N/A
PHROG	UHGV-1361483_17	phrog_23707	81.1	1.6e-23	N/A	unknown function
UniRef90	UHGV-1361483_17	UniRef90_UPI00156E1A02	135.0	5.13e-40	alanine racemase	N/A
eggNOG-mapper	UHGV-1361483_17	411483.FAEPRAA2165_01889	60.1	0.000000000632	N/A	N/A
PHROG	UHGV-1361483_19	phrog_19011	112.5	8e-34	N/A	unknown function
PHROG	UHGV-1361483_20	phrog_36	47.6	0.00000000000032	transcriptional regulator	transcription regulation
UniRef90	UHGV-1361483_20	UniRef90_UPI000931D7F9	211.0	0	RNA polymerase subunit sigma-70	N/A
eggNOG-mapper	UHGV-1361483_20	411459.RUMOBE_00943	209.0	0	N/A	N/A
structural_annotation	UHGV-1361483_20	PF02996	N/A	N/A	N/A	N/A
KOfam	UHGV-1361483_21	K07474	116.5	3.8e-34	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1361483_21	phrog_2606	331.3	0	terminase small subunit	head and packaging
UniRef90	UHGV-1361483_21	UniRef90_UPI001C10A749	443.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-1361483_21	478749.BRYFOR_07604	337.0	0	terminase, small subunit	N/A
Pfam	UHGV-1361483_21	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
Pfam	UHGV-1361483_21	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1361483_21	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1361483_21	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1361483_22	K06909	140.7	1.49995e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1361483_22	phrog_10250	222.6	0	N/A	unknown function
UniRef90	UHGV-1361483_22	UniRef90_UPI001C1142EA	801.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1361483_22	903814.ELI_3215	636.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1361483_22	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-1361483_22	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-1361483_22	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1361483_22	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1361483_22	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1361483_23	phrog_64	386.1	0	portal protein	head and packaging
UniRef90	UHGV-1361483_23	UniRef90_A0A416N3J2	774.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1361483_23	742733.HMPREF9469_01826	590.0	0	Phage portal protein, SPP1 family	N/A
Pfam	UHGV-1361483_23	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1361483_23	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1361483_23	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1361483_24	phrog_2841	323.8	0	minor head protein	head and packaging
UniRef90	UHGV-1361483_24	UniRef90_A0A564VY65	660.0	0	NAD(+)--arginine ADP-ribosyltransferase EFV	N/A
eggNOG-mapper	UHGV-1361483_24	742733.HMPREF9469_01825	322.0	0	Phage head morphogenesis protein, SPP1 gp7 family	N/A
Pfam	UHGV-1361483_24	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
Pfam	UHGV-1361483_24	PF15542	N/A	N/A	Bacterial toxin 50	Ntox50
NCBIFam	UHGV-1361483_24	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1361483_24	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1361483_24	PF15542,PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1361483_25	phrog_1865	52.5	0.0000000000000067	N/A	unknown function
eggNOG-mapper	UHGV-1361483_25	1391647.AVSV01000003_gene1805	58.2	0.000000000159	N/A	N/A
structural_annotation	UHGV-1361483_25	PF07073,MF_01077,NF037951,COG4568	N/A	N/A	N/A	N/A
PHROG	UHGV-1361483_27	phrog_172	153.1	1.4013e-45	head scaffolding protein	head and packaging
UniRef90	UHGV-1361483_27	UniRef90_A0A415FLT0	249.0	0	N/A	N/A
eggNOG-mapper	UHGV-1361483_27	742733.HMPREF9469_01824	194.0	0	N/A	N/A
Pfam	UHGV-1361483_27	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1361483_27	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1361483_28	phrog_422	299.7	0	major head protein	head and packaging
UniRef90	UHGV-1361483_28	UniRef90_A0A2H4JCM6	513.0	0	Putative capsid protein	N/A
eggNOG-mapper	UHGV-1361483_28	742733.HMPREF9469_01823	519.0	0	N/A	N/A
structural_annotation	UHGV-1361483_28	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1361483_29	phrog_2724	62.4	8.3e-18	N/A	unknown function
UniRef90	UHGV-1361483_29	UniRef90_A0A3D1FTV4	71.6	0.00000000000000926	Transcription termination factor Rho	N/A
Pfam	UHGV-1361483_29	PF07498	N/A	N/A	Rho termination factor, N-terminal domain	Rho_N
structural_annotation	UHGV-1361483_29	PF07498	N/A	N/A	N/A	N/A
PHROG	UHGV-1361483_30	phrog_132	69.1	5.6e-20	head-tail adaptor	connector
UniRef90	UHGV-1361483_30	UniRef90_UPI001593CDD6	132.0	1.05e-37	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1361483_30	742733.HMPREF9469_01821	114.0	1.75e-31	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1361483_30	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1361483_30	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1361483_31	phrog_2168	108.8	2.5e-32	N/A	unknown function
eggNOG-mapper	UHGV-1361483_31	1235800.C819_00482	97.8	6.95e-25	N/A	N/A
structural_annotation	UHGV-1361483_31	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1361483_32	phrog_5	77.1	3.1e-22	tail completion or Neck1 protein	connector
UniRef90	UHGV-1361483_32	UniRef90_A0A1C5S5J2	166.0	0	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-1361483_32	1211844.CBLM010000016_gene1487	132.0	9.67e-37	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1361483_32	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1361483_32	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1361483_32	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1361483_33	phrog_78	67.8	1.8e-19	tail terminator	connector
eggNOG-mapper	UHGV-1361483_33	1235800.C819_00480	162.0	0	N/A	N/A
structural_annotation	UHGV-1361483_33	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1361483_34	phrog_158	54.0	0.0000000000000036	major tail protein	tail
UniRef90	UHGV-1361483_34	UniRef90_UPI00189B22EE	226.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1361483_34	742733.HMPREF9469_01817	164.0	0	Phage tail tube protein, TTP	N/A
structural_annotation	UHGV-1361483_34	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1361483_35	phrog_183	53.6	0.0000000000000032	tail chaperone protein	tail
UniRef90	UHGV-1361483_35	UniRef90_UPI001EE8B5C4	152.0	1.26117e-44	N/A	N/A
eggNOG-mapper	UHGV-1361483_35	742733.HMPREF9469_01816	128.0	4.9e-36	N/A	N/A
Pfam	UHGV-1361483_35	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-1361483_35	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-1361483_36	phrog_2066	69.7	4.4e-20	N/A	unknown function
eggNOG-mapper	UHGV-1361483_36	1123304.AQYA01000037_gene232	66.2	0.00000000000154	N/A	N/A
PHROG	UHGV-1361483_37	phrog_1535	224.2	0	tail length tape measure protein	tail
UniRef90	UHGV-1361483_37	UniRef90_A0A173WM72	728.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1361483_37	1304866.K413DRAFT_3046	211.0	0	N/A	N/A
COG	UHGV-1361483_37	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-1361483_38	phrog_1194	99.3	2.7e-29	N/A	unknown function
eggNOG-mapper	UHGV-1361483_38	1121866.AUGK01000003_gene1438	73.6	0.00000000000000389	N/A	N/A
Pfam	UHGV-1361483_38	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1361483_38	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1361483_39	phrog_6616	618.0	0	tail protein	tail
UniRef90	UHGV-1361483_39	UniRef90_R5QUN9	874.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1361483_39	1280.SAXN108_2275	171.0	8.37e-40	Phage minor structural protein	N/A
Pfam	UHGV-1361483_39	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
COG	UHGV-1361483_39	COG2433	N/A	N/A	Possible nuclease of RNase H fold, RuvC/YqgF family	N/A
structural_annotation	UHGV-1361483_39	PF05113,PF18957,PF16407,NF033848,NF011782,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1361483_40	phrog_11105	53.2	0.0000000000000045	N/A	unknown function
PHROG	UHGV-1361483_41	phrog_16164	270.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1361483_41	457412.RSAG_01113	83.2	2.46e-16	N/A	N/A
structural_annotation	UHGV-1361483_41	PF10651,NF032891	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1361483_42	457412.RSAG_01112	80.1	0.000000000000134	N/A	N/A
PHROG	UHGV-1361483_43	phrog_19280	114.6	7e-34	N/A	unknown function
UniRef90	UHGV-1361483_43	UniRef90_A0A413UF00	362.0	0	N/A	N/A
eggNOG-mapper	UHGV-1361483_43	1160721.RBI_I01569	134.0	4.4e-32	N/A	N/A
Pfam	UHGV-1361483_43	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-1361483_43	PF19789	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1361483_44	PF05635,MF_04067,NF008911	N/A	N/A	N/A	N/A
KOfam	UHGV-1361483_45	K00986	96.6	2.8e-28	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-1361483_45	phrog_1423	196.0	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361483_45	UniRef90_A0A1C5PK20	587.0	0	Retron-type reverse transcriptase	N/A
eggNOG-mapper	UHGV-1361483_45	1160721.RBI_I01568	219.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
PADLOC	UHGV-1361483_45	icity0040	90.0	3.6e-26	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-1361483_45	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-1361483_45	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-1361483_45	PF00078,MF_01390,TIGR04416,COG3344	N/A	N/A	N/A	N/A
PHROG	UHGV-1361483_47	phrog_4105	86.8	2e-25	N/A	unknown function
eggNOG-mapper	UHGV-1361483_47	411459.RUMOBE_00911	176.0	0	N/A	N/A
PHROG	UHGV-1361483_48	phrog_1129	86.4	1.8e-25	holin	lysis
UniRef90	UHGV-1361483_48	UniRef90_UPI00051B7422	149.0	5.60519e-45	phage holin family protein	N/A
eggNOG-mapper	UHGV-1361483_48	1121115.AXVN01000006_gene2171	159.0	0	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1361483_48	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1361483_48	PF16079	N/A	N/A	N/A	N/A
PHROG	UHGV-1361483_49	phrog_14030	224.9	0	N/A	unknown function
UniRef90	UHGV-1361483_49	UniRef90_C6JAY8	488.0	0	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-1361483_49	411459.RUMOBE_01085	307.0	0	N/A	N/A
Pfam	UHGV-1361483_49	PF05382	N/A	N/A	Bacteriophage peptidoglycan hydrolase	Amidase_5
Pfam	UHGV-1361483_49	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-1361483_49	PF08230	N/A	N/A	CW_7 repeat	CW_7
structural_annotation	UHGV-1361483_49	PF08230	N/A	N/A	N/A	N/A
KOfam	UHGV-1361483_50	K06400	316.6	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1361483_50	phrog_95	323.9	0	integrase	integration and excision
UniRef90	UHGV-1361483_50	UniRef90_A0A1C5VRZ8	704.0	0	Resolvase, N terminal domain	N/A
eggNOG-mapper	UHGV-1361483_50	411459.RUMOBE_00967	702.0	0	COG COG1961 Site-specific recombinases, DNA invertase Pin homologs	N/A
Pfam	UHGV-1361483_50	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1361483_50	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1361483_50	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1361483_50	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1361483_50	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-1361483_52	K07448	111.2	1.2e-32	mrr; restriction system protein	N/A
PHROG	UHGV-1361483_52	phrog_13700	58.4	8.2e-17	FtsK/SpoIIIE-like protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1361483_52	UniRef90_A0A417H3P2	294.0	0	Ftsk_gamma domain-containing protein	N/A
eggNOG-mapper	UHGV-1361483_52	397290.C810_01426	203.0	0	Restriction endonuclease	N/A
PADLOC	UHGV-1361483_52	ZorD1_00005	58.4	6.7e-17	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-1361483_52	PF09397	N/A	N/A	Ftsk gamma domain	FtsK_gamma
Pfam	UHGV-1361483_52	PF04471	N/A	N/A	Restriction endonuclease	Mrr_cat
COG	UHGV-1361483_52	COG1674	N/A	N/A	DNA segregation ATPase FtsK/SpoIIIE or related protein	N/A