UHGV-1361893 (vOTU-055190)

Viral Genome: UHGV-1361893

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1361893
vOTU ID	vOTU-055190
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0322611
Associated BioSample	SAMEA2738029
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	27
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9812
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	24.83
Jumbo phage	No

Genome content
Genome length (bp)	55,437
GC content	37.22%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	76
CDS density	95%
Average CDS length (bps)	693.16
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1361893_2	phrog_4079	137.4	1.50001e-40	N/A	unknown function
eggNOG-mapper	UHGV-1361893_2	428125.CLOLEP_01365	69.3	0.00000000000995	N/A	N/A
PHROG	UHGV-1361893_26	phrog_1494	55.3	9.1e-16	N/A	unknown function
structural_annotation	UHGV-1361893_28	PF17376	N/A	N/A	N/A	N/A
PHROG	UHGV-1361893_31	phrog_1554	97.0	5.7e-29	N/A	unknown function
eggNOG-mapper	UHGV-1361893_31	997830.HMPREF1124_0611	74.3	0.0000000000000903	N/A	N/A
structural_annotation	UHGV-1361893_31	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1361893_33	phrog_1330	149.8	0	tail protein	tail
UniRef90	UHGV-1361893_33	UniRef90_UPI0012DE48F7	140.0	1e-29	gp58-like family protein	N/A
eggNOG-mapper	UHGV-1361893_33	1158604.I591_01756	128.0	6.67e-27	Prophage endopeptidase tail	N/A
Pfam	UHGV-1361893_33	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1361893_33	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1361893_33	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-1361893_33	PF14594,PF00629,PF10528,TIGR01665,NF033675,NF038393,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1361893_34	phrog_33	55.3	0.0000000000000017	distal tail protein Dit	tail
UniRef90	UHGV-1361893_34	UniRef90_A0A1L5FA70	83.6	0.00000000000000131	Phage tail protein	N/A
eggNOG-mapper	UHGV-1361893_34	1540257.JQMW01000004_gene407	84.3	1.14e-16	tail component	N/A
COG	UHGV-1361893_34	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1361893_34	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1361893_35	phrog_4372	539.4	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1361893_35	742733.HMPREF9469_05020	336.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-1361893_35	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1361893_35	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1361893_35	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1361893_37	phrog_5	41.3	0.00000000004	tail completion or Neck1 protein	connector
UniRef90	UHGV-1361893_37	UniRef90_UPI000659DD5E	99.8	1.19e-24	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1361893_37	665950.HMPREF1025_02006	94.4	2.62e-23	N/A	N/A
structural_annotation	UHGV-1361893_37	PF17395,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1361893_39	phrog_4338	136.1	1.4e-40	N/A	unknown function
eggNOG-mapper	UHGV-1361893_39	475178.B2BTI0_9CAUD	96.3	1.83e-22	N/A	N/A
PHROG	UHGV-1361893_40	phrog_4282	110.6	1.3e-32	N/A	unknown function
eggNOG-mapper	UHGV-1361893_40	742733.HMPREF9469_05024	64.3	0.0000000000278	N/A	N/A
PHROG	UHGV-1361893_41	phrog_2645	283.5	0	major tail protein	tail
UniRef90	UHGV-1361893_41	UniRef90_A0A2U8UI58	218.0	0	Major tail protein	N/A
eggNOG-mapper	UHGV-1361893_41	411460.RUMTOR_01342	206.0	0	N/A	N/A
structural_annotation	UHGV-1361893_41	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1361893_42	478749.BRYFOR_08519	79.3	7.63e-18	N/A	N/A
structural_annotation	UHGV-1361893_42	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1361893_43	phrog_4270	89.6	2.2e-26	N/A	unknown function
eggNOG-mapper	UHGV-1361893_43	742740.HMPREF9474_02268	80.1	7.07e-18	N/A	N/A
structural_annotation	UHGV-1361893_43	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
KOfam	UHGV-1361893_44	K06904	82.3	3.7e-24	N/A	N/A
PHROG	UHGV-1361893_44	phrog_3270	578.7	0	head maturation protease	head and packaging
UniRef90	UHGV-1361893_44	UniRef90_A0A6G5Y7H0	414.0	0	BIG2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1361893_44	1476888.X4YUP1_9CAUD	377.0	0	peptidase activity	N/A
Pfam	UHGV-1361893_44	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
Pfam	UHGV-1361893_44	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
structural_annotation	UHGV-1361893_44	PF05065,PF04586,MF_04119,TIGR01554,TIGR01543,COG4653,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1361893_45	phrog_12	99.8	1.8e-29	portal protein	head and packaging
UniRef90	UHGV-1361893_45	UniRef90_A0A417FQ37	336.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1361893_45	742733.HMPREF9469_05032	325.0	0	Phage portal protein	N/A
Pfam	UHGV-1361893_45	PF04860	N/A	N/A	Phage portal protein	Phage_portal
structural_annotation	UHGV-1361893_45	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1361893_46	phrog_9	262.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-1361893_46	UniRef90_A0A5C7M263	773.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1361893_46	691965.D4P7C5_9CAUD	767.0	0	Phage Terminase	N/A
Pfam	UHGV-1361893_46	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1361893_46	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
structural_annotation	UHGV-1361893_46	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1361893_47	phrog_7021	55.2	9.9e-16	N/A	unknown function
PHROG	UHGV-1361893_48	phrog_4247	50.4	0.000000000000027	virion structural protein	head and packaging
PHROG	UHGV-1361893_49	phrog_4321	142.7	9.40271e-43	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361893_49	UniRef90_X4YEE5	133.0	2.19e-37	Homing endonuclease	N/A
eggNOG-mapper	UHGV-1361893_49	475178.B2BTG9_9CAUD	120.0	2.63e-33	N/A	N/A
PHROG	UHGV-1361893_50	phrog_4259	49.3	0.000000000000072	N/A	unknown function
PHROG	UHGV-1361893_51	phrog_6918	50.3	0.000000000000036	holin	lysis
Pfam	UHGV-1361893_51	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-1361893_51	PF09682,TIGR01673	N/A	N/A	N/A	N/A
PHROG	UHGV-1361893_53	phrog_4303	74.4	1.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-1361893_53	475178.B2BTP0_9CAUD	53.1	0.0000000853	N/A	N/A
PHROG	UHGV-1361893_54	phrog_4291	1012.5	0	RNA-dependent RNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361893_54	UniRef90_A0A1C5MZZ8	663.0	0	Transposase and inactivated derivatives, IS30 family	N/A
eggNOG-mapper	UHGV-1361893_54	742740.HMPREF9474_02278	652.0	0	N/A	N/A
Pfam	UHGV-1361893_54	PF09339	N/A	N/A	IclR helix-turn-helix domain	HTH_IclR
Pfam	UHGV-1361893_54	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-1361893_54	PF05183	N/A	N/A	N/A	N/A
PHROG	UHGV-1361893_55	phrog_3953	158.6	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361893_55	UniRef90_A0A6N9P4D1	168.0	0	N/A	N/A
eggNOG-mapper	UHGV-1361893_55	478749.BRYFOR_08535	167.0	0	N/A	N/A
structural_annotation	UHGV-1361893_55	PF10926,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
UniRef90	UHGV-1361893_56	UniRef90_A0A5J6TG45	88.2	1.66e-20	Nuclease	N/A
eggNOG-mapper	UHGV-1361893_56	742740.HMPREF9474_02280	89.4	6.13e-22	N/A	N/A
structural_annotation	UHGV-1361893_56	PF01870,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-1361893_57	phrog_62	109.5	7.7e-34	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361893_57	UniRef90_A0A4D7AM36	377.0	0	DEAD/DEAH box helicase family protein	N/A
eggNOG-mapper	UHGV-1361893_57	665950.HMPREF1025_01961	367.0	0	Helicase conserved C-terminal domain	N/A
COG	UHGV-1361893_57	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-1361893_57	PF02399,MF_01821,NF038318,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-1361893_58	phrog_4787	70.5	7.8e-21	single strand annealing protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1361893_58	742733.HMPREF9469_05065	60.1	0.00000000601	N/A	N/A
structural_annotation	UHGV-1361893_58	PF21265,MF_04153	N/A	N/A	N/A	N/A
KOfam	UHGV-1361893_59	K02319	40.3	0.00000000000058	pol; DNA polymerase, archaea type [EC:2.7.7.7]	N/A
PHROG	UHGV-1361893_59	phrog_4210	1443.7	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361893_59	UniRef90_A0A6G5Y767	1143.0	0	SF3 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-1361893_59	475178.B2BTL9_9CAUD	1101.0	0	nucleic acid binding	N/A
Pfam	UHGV-1361893_59	PF19263	N/A	N/A	N/A	DUF5906
structural_annotation	UHGV-1361893_59	PF00136,PF09250,MF_04100,TIGR00592,COG0417	N/A	N/A	N/A	N/A
PHROG	UHGV-1361893_61	phrog_998	305.4	0	endolysin	lysis
UniRef90	UHGV-1361893_61	UniRef90_A0A139R807	428.0	0	Phage lysin, N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1361893_61	59241.E7DNC3_BPDP1	416.0	0	Bacteriophage peptidoglycan hydrolase	N/A
Pfam	UHGV-1361893_61	PF05382	N/A	N/A	Bacteriophage peptidoglycan hydrolase	Amidase_5
Pfam	UHGV-1361893_61	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
structural_annotation	UHGV-1361893_61	PF19127,PF05382,TIGR04035,NF008096,COG5263,COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-1361893_67	phrog_1485	86.2	4.8e-25	N/A	unknown function
eggNOG-mapper	UHGV-1361893_67	1121871.AUAT01000002_gene1368	90.5	1.75e-20	N/A	N/A
Pfam	UHGV-1361893_67	PF07659	N/A	N/A	Nucleotide modification associated domain 1	DUF1599
PHROG	UHGV-1361893_75	phrog_2152	114.7	6.6e-34	N/A	unknown function
eggNOG-mapper	UHGV-1361893_75	1476888.X4YUS5_9CAUD	102.0	6.96e-23	N/A	N/A
Pfam	UHGV-1361893_75	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-1361893_75	PF19880,NF010306	N/A	N/A	N/A	N/A