UHGV-1362595 (vOTU-055297)

Viral Genome: UHGV-1362595

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1362595
vOTU ID	vOTU-055297
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0226786
Associated BioSample	SAMEA2738120
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	19
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9792
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	24.51
Jumbo phage	No

Genome content
Genome length (bp)	32,654
GC content	50.17%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	48
CDS density	91%
Average CDS length (bps)	620.38
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
Pfam	UHGV-1362595_2	PF10685	N/A	N/A	Stress-induced bacterial acidophilic repeat motif	KGG
KOfam	UHGV-1362595_6	K00789	56.5	5.6e-17	metK, MAT; S-adenosylmethionine synthetase [EC:2.5.1.6]	N/A
PHROG	UHGV-1362595_6	phrog_1569	182.2	0	N/A	unknown function
UniRef90	UHGV-1362595_6	UniRef90_A0A3D2E2D8	290.0	0	S-adenosylmethionine synthetase	N/A
eggNOG-mapper	UHGV-1362595_6	1120978.KB894081_gene101	290.0	0	S-adenosylmethionine synthetase, N-terminal domain	N/A
Pfam	UHGV-1362595_6	PF00438	N/A	N/A	S-adenosylmethionine synthetase, N-terminal domain	S-AdoMet_synt_N
COG	UHGV-1362595_6	COG0192	N/A	N/A	S-adenosylmethionine synthetase	N/A
structural_annotation	UHGV-1362595_6	PF01941,MF_00086,TIGR01034,COG0192	N/A	N/A	N/A	N/A
PHROG	UHGV-1362595_7	phrog_29438	55.9	7.8e-16	N/A	unknown function
PHROG	UHGV-1362595_11	phrog_30251	477.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-1362595_11	UniRef90_UPI001F475B4B	446.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1362595_11	469618.FVAG_00794	430.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-1362595_11	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1362595_11	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1362595_11	PF17289,PF03237,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-1362595_12	phrog_64	384.3	0	portal protein	head and packaging
UniRef90	UHGV-1362595_12	UniRef90_A0A7W4DHI0	362.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1362595_12	562981.HMPREF0428_01823	290.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1362595_12	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1362595_12	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1362595_12	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-1362595_13	phrog_115	270.9	0	minor head protein	head and packaging
UniRef90	UHGV-1362595_13	UniRef90_A0A7W4DSA2	206.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1362595_13	1209989.TepiRe1_1146	196.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-1362595_13	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
Pfam	UHGV-1362595_13	PF15644	N/A	N/A	Papain fold toxin 1, glutamine deamidase	Gln_amidase
NCBIFam	UHGV-1362595_13	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1362595_13	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1362595_13	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1362595_15	phrog_172	98.7	8e-29	head scaffolding protein	head and packaging
UniRef90	UHGV-1362595_15	UniRef90_A0A7W4E738	70.5	0.00000000000508	N/A	N/A
eggNOG-mapper	UHGV-1362595_15	1211844.CBLM010000016_gene1492	68.2	0.00000000000905	N/A	N/A
Pfam	UHGV-1362595_15	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1362595_15	PF14265	N/A	N/A	N/A	N/A
UniRef90	UHGV-1362595_16	UniRef90_A0A0M2NI16	237.0	0	S-l_SbsC_C domain-containing protein	N/A
structural_annotation	UHGV-1362595_16	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1362595_18	phrog_132	51.0	0.000000000000021	head-tail adaptor	connector
Pfam	UHGV-1362595_19	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-1362595_19	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1362595_20	phrog_5	100.1	2.5e-29	tail completion or Neck1 protein	connector
UniRef90	UHGV-1362595_20	UniRef90_A0A7W4E728	74.7	0.0000000000000185	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1362595_20	1499683.CCFF01000014_gene3905	63.2	0.000000000138	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1362595_20	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1362595_20	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1362595_20	PF05069,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1362595_21	PF05657,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1362595_22	phrog_158	67.4	2.7e-19	major tail protein	tail
UniRef90	UHGV-1362595_22	UniRef90_UPI000210B507	136.0	2.17e-38	phage tail tube protein	N/A
eggNOG-mapper	UHGV-1362595_22	650150.ERH_0618	136.0	3.63e-39	Phage tail tube protein	N/A
Pfam	UHGV-1362595_22	PF16461	N/A	N/A	Lambda phage tail tube protein, TTP	Phage_TTP_12
structural_annotation	UHGV-1362595_22	PF16461,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1362595_23	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-1362595_24	phrog_35723	227.7	0	N/A	unknown function
UniRef90	UHGV-1362595_24	UniRef90_UPI00135AD929	394.0	0	tape measure protein	N/A
eggNOG-mapper	UHGV-1362595_24	650150.ERH_0621	390.0	0	tape measure	N/A
Pfam	UHGV-1362595_24	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1362595_24	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1362595_24	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1362595_24	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1362595_25	phrog_1194	73.7	2.2e-21	N/A	unknown function
eggNOG-mapper	UHGV-1362595_25	1229517.AMFD01000023_gene1305	54.3	0.000000102	N/A	N/A
structural_annotation	UHGV-1362595_25	PF20458,TIGR01633,COG4718	N/A	N/A	N/A	N/A
PHROG	UHGV-1362595_26	phrog_2929	98.1	3.4e-29	tail fiber protein	tail
UniRef90	UHGV-1362595_26	UniRef90_A0A7V8A6H9	143.0	1.68e-32	PblB	N/A
eggNOG-mapper	UHGV-1362595_26	658659.HMPREF0983_03295	80.5	0.00000000000102	N/A	N/A
structural_annotation	UHGV-1362595_26	PF04862,PF05113,NF033848,NF033675,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1362595_27	phrog_372	314.4	0	tail protein	tail
UniRef90	UHGV-1362595_27	UniRef90_UPI0004693702	101.0	1.43e-18	N/A	N/A
eggNOG-mapper	UHGV-1362595_27	1416759.AYMR01000009_gene3061	101.0	2.4e-19	N/A	N/A
PHROG	UHGV-1362595_31	phrog_7698	59.9	4.3e-17	endolysin	lysis
eggNOG-mapper	UHGV-1362595_31	1235796.C815_01769	58.2	0.000000802	hydrolase, family 25	N/A
Pfam	UHGV-1362595_31	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-1362595_31	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-1362595_31	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
PHROG	UHGV-1362595_35	phrog_391	84.9	1.1e-24	replication initiation O-like	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1362595_35	596315.HMPREF0634_0383	59.7	0.000000111	DnaD domain protein	N/A
Pfam	UHGV-1362595_35	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-1362595_35	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1362595_35	PF13730,MF_01819,NF040939,COG5529	N/A	N/A	N/A	N/A
KOfam	UHGV-1362595_38	K07455	64.9	1.8e-18	recT; recombination protein RecT	N/A
PHROG	UHGV-1362595_38	phrog_148	69.7	3.9e-20	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
Pfam	UHGV-1362595_38	PF03837	N/A	N/A	RecT family	RecT
COG	UHGV-1362595_38	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
KOfam	UHGV-1362595_39	K01143	54.3	0.0000000000000026	exo; exodeoxyribonuclease (lambda-induced) [EC:3.1.11.3]	N/A
PHROG	UHGV-1362595_39	phrog_149	115.6	3.7e-34	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1362595_39	UniRef90_A0A6J5N6Q9	146.0	1.96e-40	Phage_rel_nuc, putative phage-type endonuclease	N/A
eggNOG-mapper	UHGV-1362595_39	670292.JH26_14425	132.0	1.55e-35	YqaJ-like viral recombinase domain	N/A
Pfam	UHGV-1362595_39	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
structural_annotation	UHGV-1362595_39	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
KOfam	UHGV-1362595_41	K03111	116.6	3.4e-34	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1362595_41	phrog_44	118.0	9.4e-35	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1362595_41	UniRef90_A0A857VC94	118.0	2.4e-31	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1362595_41	546271.Selsp_1347	93.6	1.14e-22	Single-strand binding protein family	N/A
Pfam	UHGV-1362595_41	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1362595_41	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1362595_41	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1362595_41	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1362595_41	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1362595_43	phrog_824	76.7	2.6e-22	N/A	unknown function
UniRef90	UHGV-1362595_43	UniRef90_A0A660LVV4	75.9	0.00000000000000533	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1362595_43	644966.Tmar_0031	56.2	0.0000000415	VRR-NUC domain	N/A
Pfam	UHGV-1362595_43	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
KOfam	UHGV-1362595_46	K00571	117.3	1.8e-34	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1362595_46	phrog_498	321.3	0	DNA methyltransferase	other
UniRef90	UHGV-1362595_46	UniRef90_UPI0013ECB5BD	390.0	0	DNA modification methylase	N/A
eggNOG-mapper	UHGV-1362595_46	469616.FMAG_00698	220.0	0	DNA methylase	N/A
PADLOC	UHGV-1362595_46	MTase_II_00015	145.2	0	Type II methyltransferase	RM
Pfam	UHGV-1362595_46	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-1362595_46	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1362595_46	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1362595_46	PF01555,PF02195,MF_02015,MF_01872,NF010253,TIGR04285,COG0863,COG1475	N/A	N/A	N/A	N/A