UHGV-1363061 (vOTU-055375)

Viral Genome: UHGV-1363061

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1363061
vOTU ID	vOTU-055375
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0239314
Associated BioSample	SAMEA2738152
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9803
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	53.27
Jumbo phage	No

Genome content
Genome length (bp)	35,069
GC content	39.01%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	54
CDS density	95%
Average CDS length (bps)	617.61
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1363061_1	K06400	398.6	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1363061_1	phrog_95	392.8	0	integrase	integration and excision
UniRef90	UHGV-1363061_1	UniRef90_UPI000404CB2E	758.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1363061_1	1123263.AUKY01000076_gene1782	758.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1363061_1	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1363061_1	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1363061_1	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1363061_1	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1363061_1	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-1363061_2	K01356	111.4	1.2e-32	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1363061_2	phrog_4	114.6	1.1e-33	transcriptional repressor	transcription regulation
UniRef90	UHGV-1363061_2	UniRef90_A0A2N2DVU5	173.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1363061_2	500633.CLOHIR_00339	124.0	1.45e-32	Peptidase S24-like	N/A
PADLOC	UHGV-1363061_2	retron_type_VI_hth_cluster2_1	48.8	0.00000000000015	N/A	Retron
Pfam	UHGV-1363061_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1363061_2	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-1363061_2	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1363061_2	PF00717,PF12844,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1363061_3	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1363061_5	K07741	202.2	0	antB; anti-repressor protein	N/A
PHROG	UHGV-1363061_5	phrog_63	143.8	1.49939e-42	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1363061_5	UniRef90_UPI000415233E	342.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-1363061_5	1123263.AUKY01000076_gene1778	342.0	0	Phage antirepressor protein	N/A
Pfam	UHGV-1363061_5	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-1363061_5	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1363061_5	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-1363061_5	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
PHROG	UHGV-1363061_12	phrog_155	80.6	2.2e-23	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1363061_12	UniRef90_A0A4Q0VH70	128.0	2.01e-33	Recombinase	N/A
eggNOG-mapper	UHGV-1363061_12	1321779.HMPREF1984_00529	111.0	1.05e-27	ERF superfamily	N/A
Pfam	UHGV-1363061_12	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1363061_12	PF04404	N/A	N/A	N/A	N/A
PHROG	UHGV-1363061_13	phrog_6244	76.2	6e-22	N/A	unknown function
UniRef90	UHGV-1363061_13	UniRef90_A0A0D0RH99	72.4	0.0000000000000697	Putative bacteriophage endonuclease	N/A
eggNOG-mapper	UHGV-1363061_13	1158609.I586_00060	57.8	0.0000000234	YqaJ-like viral recombinase domain	N/A
COG	UHGV-1363061_13	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1363061_13	PF05565	N/A	N/A	N/A	N/A
PHROG	UHGV-1363061_14	phrog_298	84.8	6.9e-25	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1363061_14	UniRef90_A0A3D5XTJ3	126.0	3.36e-33	Cas_Cas4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1363061_14	508419.F8J184_9CAUD	100.0	6.42e-24	nuclease activity	N/A
Pfam	UHGV-1363061_14	PF12705	N/A	N/A	PD-(D/E)XK nuclease superfamily	PDDEXK_1
structural_annotation	UHGV-1363061_14	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-1363061_15	phrog_1389	57.0	3.4e-16	N/A	unknown function
eggNOG-mapper	UHGV-1363061_15	1347392.CCEZ01000060_gene3269	68.2	0.000000000000256	N/A	N/A
structural_annotation	UHGV-1363061_15	PF11056,TIGR04376,COG1842	N/A	N/A	N/A	N/A
KOfam	UHGV-1363061_17	K03111	143.7	1.90016e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1363061_17	phrog_44	146.2	1.79366e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1363061_17	UniRef90_UPI000414260D	217.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1363061_17	1123263.AUKY01000072_gene2101	217.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1363061_17	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1363061_17	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1363061_17	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1363061_17	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1363061_17	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1363061_18	phrog_5968	83.9	1e-24	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1363061_18	UniRef90_A0A7X2NQE5	194.0	0	Phage_rep_org_N domain-containing protein	N/A
eggNOG-mapper	UHGV-1363061_18	626523.GCWU000342_01039	172.0	0	DnaD domain protein	N/A
Pfam	UHGV-1363061_18	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
COG	UHGV-1363061_18	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
UniRef90	UHGV-1363061_19	UniRef90_UPI00042A27AD	221.0	0	replicative helicase loader/inhibitor	N/A
Pfam	UHGV-1363061_19	PF03221	N/A	N/A	Tc5 transposase DNA-binding domain	HTH_Tnp_Tc5
structural_annotation	UHGV-1363061_19	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-1363061_20	K00571	120.3	2.1e-35	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1363061_20	phrog_67	112.9	2e-34	DNA methyltransferase	other
UniRef90	UHGV-1363061_20	UniRef90_A0A890GYF3	441.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1363061_20	35241.Q9XJE8_BPTU2	390.0	0	helicase activity	N/A
PADLOC	UHGV-1363061_20	MTase_II_00157	97.1	1.2e-29	Type II methyltransferase	RM
Pfam	UHGV-1363061_20	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
structural_annotation	UHGV-1363061_20	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1363061_26	1123263.AUKY01000111_gene1089	51.2	0.000004	N/A	N/A
structural_annotation	UHGV-1363061_26	PF04545,MF_00674,TIGR01636,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-1363061_27	phrog_940	342.4	0	nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1363061_27	UniRef90_UPI0009327623	481.0	0	N/A	N/A
eggNOG-mapper	UHGV-1363061_27	1232449.BAHV02000018_gene1534	367.0	0	N/A	N/A
PADLOC	UHGV-1363061_27	MTase_II_00015	134.2	1.4e-39	Type II methyltransferase	RM
Pfam	UHGV-1363061_27	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-1363061_27	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-1363061_27	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1363061_27	PF14386,PF02195,TIGR00180	N/A	N/A	N/A	N/A
UniRef90	UHGV-1363061_30	UniRef90_F5KZP8	136.0	6.49e-38	Conserved domain protein	N/A
KOfam	UHGV-1363061_31	K11044	47.0	0.00000000000031	spyA; C3 family ADP-ribosyltransferase [EC:2.4.2.-]	N/A
UniRef90	UHGV-1363061_31	UniRef90_A0A843EWR1	109.0	7.77e-25	ADPrib_exo_Tox domain-containing protein	N/A
eggNOG-mapper	UHGV-1363061_31	862517.HMPREF9225_1651	119.0	4.09e-28	Phage Mu protein F like protein	N/A
Pfam	UHGV-1363061_31	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
COG	UHGV-1363061_31	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1363061_31	PF03496,MF_04142,NF041404	N/A	N/A	N/A	N/A
KOfam	UHGV-1363061_32	K06909	402.6	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1363061_32	phrog_3717	173.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-1363061_32	UniRef90_A0A3P1S603	627.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1363061_32	411461.DORFOR_01162	484.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1363061_32	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1363061_32	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1363061_32	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1363061_32	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1363061_32	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1363061_33	phrog_533	311.6	0	portal protein	head and packaging
UniRef90	UHGV-1363061_33	UniRef90_A0A3P1S3R5	470.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1363061_33	411470.RUMGNA_02212	404.0	0	N/A	N/A
structural_annotation	UHGV-1363061_33	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1363061_34	phrog_581	313.5	0	minor head protein	head and packaging
UniRef90	UHGV-1363061_34	UniRef90_UPI00138F9ED1	340.0	0	polymorphic toxin type 50 domain-containing protein	N/A
eggNOG-mapper	UHGV-1363061_34	1449050.JNLE01000003_gene3892	317.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1363061_34	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1363061_34	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1363061_34	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1363061_35	phrog_194	82.8	5.5e-24	head scaffolding protein	head and packaging
UniRef90	UHGV-1363061_35	UniRef90_UPI001592F515	111.0	9.02e-28	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1363061_35	411470.RUMGNA_02218	112.0	1.07e-28	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-1363061_35	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1363061_35	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1363061_36	phrog_422	208.4	0	major head protein	head and packaging
UniRef90	UHGV-1363061_36	UniRef90_A0A345MKD0	288.0	0	Main capsid protein	N/A
eggNOG-mapper	UHGV-1363061_36	641112.ACOK01000073_gene2894	306.0	0	N/A	N/A
structural_annotation	UHGV-1363061_36	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1363061_38	phrog_541	59.2	7.1e-17	head-tail adaptor	connector
UniRef90	UHGV-1363061_38	UniRef90_A0A371AQT0	80.5	4.58e-17	N/A	N/A
eggNOG-mapper	UHGV-1363061_38	1449050.JNLE01000003_gene3888	68.6	0.000000000000332	N/A	N/A
eggNOG-mapper	UHGV-1363061_39	1449050.JNLE01000003_gene3887	70.5	0.0000000000000524	N/A	N/A
structural_annotation	UHGV-1363061_39	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1363061_40	phrog_556	86.5	9.8e-26	minor head protein	head and packaging
UniRef90	UHGV-1363061_40	UniRef90_UPI000691B8FF	126.0	2.2e-34	minor capsid protein	N/A
eggNOG-mapper	UHGV-1363061_40	1449050.JNLE01000003_gene3886	126.0	3.69e-35	N/A	N/A
Pfam	UHGV-1363061_40	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1363061_40	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1363061_41	phrog_3266	69.6	4.2e-20	tail completion	connector
eggNOG-mapper	UHGV-1363061_41	1449050.JNLE01000003_gene3885	99.8	1.01e-24	N/A	N/A
structural_annotation	UHGV-1363061_41	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1363061_42	phrog_3099	122.5	3.1e-36	N/A	unknown function
eggNOG-mapper	UHGV-1363061_42	1304866.K413DRAFT_3043	162.0	0	N/A	N/A
structural_annotation	UHGV-1363061_42	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1363061_43	phrog_11299	95.2	6.8e-28	N/A	unknown function
eggNOG-mapper	UHGV-1363061_43	1449050.JNLE01000003_gene3883	80.1	4.45e-17	N/A	N/A
structural_annotation	UHGV-1363061_43	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1363061_44	phrog_706	139.2	2.70002e-41	N/A	unknown function
UniRef90	UHGV-1363061_44	UniRef90_UPI00051C36A4	196.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1363061_44	1449050.JNLE01000003_gene3882	195.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1363061_44	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1363061_44	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1363061_45	phrog_1535	133.9	0	tail length tape measure protein	tail
UniRef90	UHGV-1363061_45	UniRef90_A0A1C5N853	156.0	1.45e-35	Phage-related protein	N/A
eggNOG-mapper	UHGV-1363061_45	1449050.JNLE01000003_gene3881	150.0	2.23e-34	domain protein	N/A
COG	UHGV-1363061_45	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-1363061_47	phrog_18190	87.9	0	N/A	unknown function
UniRef90	UHGV-1363061_47	UniRef90_A0A843HRZ5	103.0	3.88e-19	Tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-1363061_47	1123263.AUKY01000015_gene1622	564.0	0	cellulase activity	N/A
COG	UHGV-1363061_47	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1363061_47	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1363061_48	1123263.AUKY01000046_gene480	163.0	1.69557e-43	N/A	N/A
structural_annotation	UHGV-1363061_48	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
Pfam	UHGV-1363061_49	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
KOfam	UHGV-1363061_50	K22409	145.1	6.89439e-43	sle1; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1363061_50	phrog_291	108.5	6.9e-32	endolysin	lysis
UniRef90	UHGV-1363061_50	UniRef90_E7MNY0	593.0	0	Glycosyl hydrolase family 25	N/A
eggNOG-mapper	UHGV-1363061_50	706433.HMPREF9430_01251	593.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1363061_50	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-1363061_50	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-1363061_50	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-1363061_50	PF01183,PF01476,TIGR02899,NF007360,COG3757,COG1388	N/A	N/A	N/A	N/A
PHROG	UHGV-1363061_51	phrog_37604	77.3	1.7e-22	N/A	unknown function
eggNOG-mapper	UHGV-1363061_51	693746.OBV_22680	52.4	0.00000277	N/A	N/A
PHROG	UHGV-1363061_52	phrog_9233	71.5	1.3e-20	holin	lysis
UniRef90	UHGV-1363061_52	UniRef90_UPI000412C652	110.0	2.18e-30	phage holin	N/A
eggNOG-mapper	UHGV-1363061_52	742740.HMPREF9474_02251	79.3	8.89e-19	Putative phage holin Dp-1	N/A
Pfam	UHGV-1363061_52	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-1363061_52	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-1363061_54	phrog_1529	49.8	0.000000000000046	N/A	unknown function