UHGV-1363348 (vOTU-003860)

Viral Genome: UHGV-1363348

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1363348
vOTU ID	vOTU-003860
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0270479
Associated BioSample	SAMN00715264
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	23
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9808
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	59.39
Jumbo phage	No

Genome content
Genome length (bp)	40,312
GC content	30.42%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	70
CDS density	91%
Average CDS length (bps)	522.34
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1363348_1	phrog_991	44.7	0.0000000000014	tail length tape measure protein	tail
PHROG	UHGV-1363348_2	phrog_18646	247.8	0	N/A	unknown function
UniRef90	UHGV-1363348_2	UniRef90_B6CXF0	212.0	0	Peptidase-colicin	N/A
PHROG	UHGV-1363348_3	phrog_885	155.8	0	major tail protein	tail
UniRef90	UHGV-1363348_3	UniRef90_Q894J4	63.9	0.00000000445	Conserved protein	N/A
eggNOG-mapper	UHGV-1363348_3	411465.PEPMIC_00741	84.0	2.08e-17	N/A	N/A
structural_annotation	UHGV-1363348_3	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1363348_4	phrog_17405	275.9	0	head protein	head and packaging
structural_annotation	UHGV-1363348_4	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-1363348_5	phrog_17977	252.6	0	N/A	unknown function
UniRef90	UHGV-1363348_5	UniRef90_UPI00141211AB	94.4	9.11e-23	head-tail adaptor protein	N/A
structural_annotation	UHGV-1363348_5	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1363348_6	phrog_1236	142.0	2.59941e-42	head protein	head and packaging
PHROG	UHGV-1363348_7	phrog_2310	57.3	1.3e-16	N/A	unknown function
eggNOG-mapper	UHGV-1363348_7	931626.Awo_c34950	48.1	0.000000625	N/A	N/A
PHROG	UHGV-1363348_8	phrog_23208	705.8	0	virion structural protein	head and packaging
UniRef90	UHGV-1363348_8	UniRef90_B6CXE5	395.0	0	Pre-neck/exonuclease	N/A
eggNOG-mapper	UHGV-1363348_8	1391647.AVSV01000022_gene2575	98.2	4.03e-18	N/A	N/A
Pfam	UHGV-1363348_8	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
structural_annotation	UHGV-1363348_8	PF10651,COG5513	N/A	N/A	N/A	N/A
PHROG	UHGV-1363348_9	phrog_212	257.9	0	major head protein	head and packaging
UniRef90	UHGV-1363348_9	UniRef90_UPI001D0814F6	364.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-1363348_9	552396.HMPREF0863_00277	352.0	0	N/A	N/A
structural_annotation	UHGV-1363348_9	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1363348_10	phrog_194	69.1	8.6e-20	head scaffolding protein	head and packaging
UniRef90	UHGV-1363348_10	UniRef90_A0A5H2QW52	348.0	0	Recombination related exonuclease	N/A
structural_annotation	UHGV-1363348_10	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1363348_12	phrog_1313	255.0	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1363348_12	UniRef90_B6CXE0	846.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1363348_12	673376.F2VHW6_9CAUD	846.0	0	Virulence-associated protein E	N/A
Pfam	UHGV-1363348_12	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
structural_annotation	UHGV-1363348_12	PF05272,MF_04000,NF011296,COG5545	N/A	N/A	N/A	N/A
PHROG	UHGV-1363348_13	phrog_16621	118.9	8.8e-36	N/A	unknown function
PHROG	UHGV-1363348_14	phrog_16552	89.5	2.7e-26	N/A	unknown function
PHROG	UHGV-1363348_15	phrog_22191	117.6	3.4e-35	N/A	unknown function
PHROG	UHGV-1363348_16	phrog_374	230.8	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1363348_16	UniRef90_Q4ZBR0	198.0	0	ORF019	N/A
eggNOG-mapper	UHGV-1363348_16	673376.F2VHW3_9CAUD	442.0	0	sequence-specific DNA binding transcription factor activity	N/A
structural_annotation	UHGV-1363348_16	PF18337	N/A	N/A	N/A	N/A
UniRef90	UHGV-1363348_17	UniRef90_A0A5H2QSD3	143.0	1.02015e-42	Putative tail component	N/A
Pfam	UHGV-1363348_17	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
PHROG	UHGV-1363348_18	phrog_115	163.3	0	minor head protein	head and packaging
UniRef90	UHGV-1363348_18	UniRef90_B6CXD5	702.0	0	Minor head protein	N/A
eggNOG-mapper	UHGV-1363348_18	1140001.I571_01831	92.8	1.23e-17	Phage Mu protein F like protein	N/A
Pfam	UHGV-1363348_18	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1363348_18	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1363348_18	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1363348_19	phrog_419	110.3	2e-32	N/A	unknown function
UniRef90	UHGV-1363348_19	UniRef90_A0A2X3AGC8	148.0	8.40779e-45	Gp9	N/A
eggNOG-mapper	UHGV-1363348_19	673376.F2VHW2_9CAUD	182.0	0	N/A	N/A
PHROG	UHGV-1363348_20	phrog_64	306.9	0	portal protein	head and packaging
UniRef90	UHGV-1363348_20	UniRef90_F8UBG3	876.0	0	Phage portal protein SPP1	N/A
eggNOG-mapper	UHGV-1363348_20	673376.F2VHW1_9CAUD	894.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1363348_20	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1363348_20	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1363348_21	phrog_236	96.8	4.5e-28	nucleotide kinase	other
UniRef90	UHGV-1363348_21	UniRef90_A0A6B4UVZ1	102.0	2.29e-27	N/A	N/A
eggNOG-mapper	UHGV-1363348_21	673376.F2VHW0_9CAUD	120.0	1.11e-34	N/A	N/A
Pfam	UHGV-1363348_21	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-1363348_21	PF11753	N/A	N/A	N/A	N/A
PHROG	UHGV-1363348_22	phrog_30251	561.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-1363348_22	UniRef90_A0A8F1V777	507.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1363348_22	1522092.A0A090EUA8_9CAUD	493.0	0	Pfam:Terminase_6C	N/A
Pfam	UHGV-1363348_22	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-1363348_22	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-1363348_22	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
structural_annotation	UHGV-1363348_22	PF17289,PF03237,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-1363348_23	phrog_606	51.1	0.000000000000021	terminase small subunit	head and packaging
eggNOG-mapper	UHGV-1363348_23	931276.Cspa_c57180	69.7	0.00000000000023	DNA-packaging protein gp3	N/A
Pfam	UHGV-1363348_23	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1363348_23	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-1363348_24	phrog_17705	261.9	0	N/A	unknown function
PHROG	UHGV-1363348_25	phrog_31157	104.1	4.9e-31	N/A	unknown function
PHROG	UHGV-1363348_26	phrog_18244	173.2	0	N/A	unknown function
PHROG	UHGV-1363348_27	phrog_2245	105.7	3.6e-31	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-1363348_27	UniRef90_A0A5H2QSD0	202.0	0	Putative nucleoside triphosphate pyrophosphohydrolase	N/A
eggNOG-mapper	UHGV-1363348_27	926561.KB900623_gene754	50.4	0.00000114	N/A	N/A
structural_annotation	UHGV-1363348_27	PF01503,TIGR03188	N/A	N/A	N/A	N/A
UniRef90	UHGV-1363348_28	UniRef90_B6CXI7	209.0	0	Cytolysin	N/A
PHROG	UHGV-1363348_29	phrog_18098	653.4	0	N/A	unknown function
UniRef90	UHGV-1363348_29	UniRef90_F8UBK6	563.0	0	CHC2 zinc finger protein	N/A
eggNOG-mapper	UHGV-1363348_29	1158614.I592_01227	70.9	0.00000000011	Phage plasmid primase P4 family	N/A
Pfam	UHGV-1363348_29	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-1363348_29	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
UniRef90	UHGV-1363348_30	UniRef90_UPI001D104826	157.0	0	pyrimidine dimer DNA glycosylase/endonuclease V	N/A
eggNOG-mapper	UHGV-1363348_30	1151292.QEW_2203	152.0	2.8026e-45	Pyrimidine dimer DNA glycosylase	N/A
Pfam	UHGV-1363348_30	PF03013	N/A	N/A	Pyrimidine dimer DNA glycosylase	Pyr_excise
structural_annotation	UHGV-1363348_30	PF03013,TIGR02328	N/A	N/A	N/A	N/A
PHROG	UHGV-1363348_31	phrog_5558	90.2	2.2e-26	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1363348_31	UniRef90_B6CXI4	218.0	0	XRE-like regulator	N/A
PHROG	UHGV-1363348_32	phrog_27657	187.3	0	N/A	unknown function
KOfam	UHGV-1363348_33	K03111	115.5	8.2e-34	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1363348_33	phrog_44	116.9	2.1e-34	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1363348_33	UniRef90_F2VHV2	235.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1363348_33	673376.F2VHV2_9CAUD	235.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1363348_33	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1363348_33	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1363348_33	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1363348_33	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-1363348_35	K03465	203.9	0	thyX, thy1; thymidylate synthase (FAD) [EC:2.1.1.148]	N/A
PHROG	UHGV-1363348_35	phrog_85	157.9	0	thymidylate synthase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1363348_35	UniRef90_F8UBQ4	446.0	0	Predicted alternative thymidylate synthase	N/A
eggNOG-mapper	UHGV-1363348_35	673376.F2VHV1_9CAUD	446.0	0	flavin adenine dinucleotide binding	N/A
Pfam	UHGV-1363348_35	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
NCBIFam	UHGV-1363348_35	TIGR02170.1	N/A	N/A	FAD-dependent thymidylate synthase	N/A
HAMAP	UHGV-1363348_35	MF_01408	N/A	N/A	Flavin-dependent thymidylate synthase [thyX]	N/A
structural_annotation	UHGV-1363348_35	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-1363348_36	phrog_16715	136.0	4.69996e-41	N/A	unknown function
PHROG	UHGV-1363348_37	phrog_3490	200.4	0	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1363348_37	UniRef90_A0A6L9ENY8	175.0	0	ERCC4-type nuclease	N/A
eggNOG-mapper	UHGV-1363348_37	673376.F2VHU9_9CAUD	371.0	0	nuclease activity	N/A
Pfam	UHGV-1363348_37	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-1363348_37	PF02732,NF040956,COG1948	N/A	N/A	N/A	N/A
PHROG	UHGV-1363348_38	phrog_2324	154.1	0	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1363348_38	UniRef90_F8UBF0	211.0	0	ERF superfamily protein	N/A
eggNOG-mapper	UHGV-1363348_38	673376.F2VHU8_9CAUD	380.0	0	ERF superfamily	N/A
Pfam	UHGV-1363348_38	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1363348_38	PF04404,TIGR00607	N/A	N/A	N/A	N/A
PHROG	UHGV-1363348_39	phrog_253	154.6	0	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1363348_39	UniRef90_B6CXH7	297.0	0	Gp157	N/A
eggNOG-mapper	UHGV-1363348_39	315749.Bcer98_2962	109.0	4.09e-28	Siphovirus Gp157	N/A
Pfam	UHGV-1363348_39	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1363348_39	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-1363348_40	phrog_18368	178.1	0	N/A	unknown function
PHROG	UHGV-1363348_41	phrog_19908	112.8	8.5e-34	N/A	unknown function
PHROG	UHGV-1363348_42	phrog_17879	407.6	0	N/A	unknown function
COG	UHGV-1363348_42	COG1528	N/A	N/A	Ferritin	N/A
structural_annotation	UHGV-1363348_42	PF00210,MF_01441,NF011597,COG1528	N/A	N/A	N/A	N/A
PHROG	UHGV-1363348_43	phrog_17454	180.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1363348_46	476272.RUMHYD_01770	69.7	0.00000000000668	N/A	N/A
KOfam	UHGV-1363348_49	K07741	210.3	0	antB; anti-repressor protein	N/A
PHROG	UHGV-1363348_49	phrog_63	194.1	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1363348_49	UniRef90_UPI000BBB8C63	280.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-1363348_49	673376.F2VHU3_9CAUD	484.0	0	DNA binding	N/A
Pfam	UHGV-1363348_49	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-1363348_49	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
structural_annotation	UHGV-1363348_49	PF08346,PF03374,TIGR02681,COG3561,COG3645	N/A	N/A	N/A	N/A
PHROG	UHGV-1363348_50	phrog_18552	198.1	0	N/A	unknown function
PHROG	UHGV-1363348_51	phrog_17646	159.2	0	N/A	unknown function
PHROG	UHGV-1363348_52	phrog_18566	113.6	5e-34	N/A	unknown function
PHROG	UHGV-1363348_56	phrog_18689	200.5	0	N/A	unknown function
PHROG	UHGV-1363348_57	phrog_9584	65.5	4.6e-19	N/A	unknown function
PHROG	UHGV-1363348_58	phrog_17096	148.0	9.80909e-45	N/A	unknown function
PHROG	UHGV-1363348_59	phrog_17736	182.9	0	N/A	unknown function
PHROG	UHGV-1363348_60	phrog_19685	131.3	1.7e-39	N/A	unknown function
PHROG	UHGV-1363348_63	phrog_1193	62.1	7.5e-18	hemolysin	other
UniRef90	UHGV-1363348_63	UniRef90_A0A5H2QSB7	160.0	0	Recombination related exonuclease	N/A
UniRef90	UHGV-1363348_64	UniRef90_F8UBN4	158.0	0	Small integral membrane protein	N/A
eggNOG-mapper	UHGV-1363348_64	457396.CSBG_00968	56.2	0.00000000132	COG5546 Small integral membrane protein	N/A
Pfam	UHGV-1363348_64	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
COG	UHGV-1363348_64	COG5546	N/A	N/A	N/A	N/A
KOfam	UHGV-1363348_65	K01448	62.3	7.7e-18	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1363348_65	phrog_435	145.9	3.19496e-43	endolysin	lysis
UniRef90	UHGV-1363348_65	UniRef90_F8UBD2	444.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1363348_65	931276.Cspa_c10340	168.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1363348_65	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-1363348_65	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1363348_65	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
UniRef90	UHGV-1363348_66	UniRef90_B6CXF6	1172.0	0	Gp58-like protein	N/A
eggNOG-mapper	UHGV-1363348_66	573061.Clocel_3531	150.0	2.94e-35	Phage minor structural protein	N/A
COG	UHGV-1363348_66	COG4926	N/A	N/A	Phage-related protein	N/A
KOfam	UHGV-1363348_67	K02238	78.0	6.8e-23	comEC; competence protein ComEC	N/A
PHROG	UHGV-1363348_67	phrog_7043	1977.1	0	tail protein	tail
UniRef90	UHGV-1363348_67	UniRef90_B6CXF5	1832.0	0	Endopeptidase-endolysin	N/A
eggNOG-mapper	UHGV-1363348_67	673376.F2VHX8_9CAUD	731.0	0	N/A	N/A
Pfam	UHGV-1363348_67	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-1363348_67	PF00753	N/A	N/A	Metallo-beta-lactamase superfamily	Lactamase_B
NCBIFam	UHGV-1363348_67	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
PHROG	UHGV-1363348_68	phrog_33	65.6	1.3e-18	distal tail protein Dit	tail
UniRef90	UHGV-1363348_68	UniRef90_F8UBI2	451.0	0	Putative phage tail component	N/A
eggNOG-mapper	UHGV-1363348_68	999411.HMPREF1092_03310	87.8	3.33e-18	N/A	N/A
NCBIFam	UHGV-1363348_68	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-1363348_68	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1363348_68	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1363348_69	411470.RUMGNA_02203	55.1	0.000000474	N/A	N/A
PHROG	UHGV-1363348_70	phrog_15478	538.4	0	tail length tape measure protein	tail
UniRef90	UHGV-1363348_70	UniRef90_B6CXF2	949.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-1363348_70	552396.HMPREF0863_01444	345.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1363348_70	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1363348_70	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1363348_70	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1363348_70	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A