UHGV-1363431 (vOTU-055440)

Viral Genome: UHGV-1363431

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1363431
vOTU ID	vOTU-055440
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0300704
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.98
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	29.65
Jumbo phage	No

Genome content
Genome length (bp)	46,698
GC content	45.80%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	76
CDS density	87%
Average CDS length (bps)	535.70
Total tRNA genes	2
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-1363431_2	PF00210,MF_01441,NF011597,COG1528	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1363431_3	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1363431_6	1235790.C805_00058	63.5	0.000000000261	N/A	N/A
structural_annotation	UHGV-1363431_7	PF04545,MF_00245,NF001074,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1363431_11	phrog_1129	40.3	0.000000000044	holin	lysis
UniRef90	UHGV-1363431_11	UniRef90_A0A316NUT2	53.5	0.000000187	Enolase	N/A
eggNOG-mapper	UHGV-1363431_11	1226322.HMPREF1545_00069	51.6	0.000000199	Phage holin family Hol44, in holin superfamily V	N/A
structural_annotation	UHGV-1363431_11	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1363431_12	phrog_2310	42.4	0.000000000007	N/A	unknown function
PHROG	UHGV-1363431_13	phrog_32509	41.9	0.000000000014	N/A	unknown function
COG	UHGV-1363431_13	COG3209	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1363431_13	PF13472,PF10651,COG2845	N/A	N/A	N/A	N/A
KOfam	UHGV-1363431_14	K21472	59.2	8.5e-17	lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]	N/A
PHROG	UHGV-1363431_14	phrog_7767	45.2	0.00000000000082	metallo-endopeptidase	other
UniRef90	UHGV-1363431_14	UniRef90_A0A2V2FTH8	283.0	0	Peptidase M23	N/A
eggNOG-mapper	UHGV-1363431_14	665956.HMPREF1032_02928	242.0	0	N/A	N/A
Pfam	UHGV-1363431_14	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
structural_annotation	UHGV-1363431_14	PF01551,NF040883	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1363431_16	PF00754,MF_00813,TIGR02961,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-1363431_19	phrog_18190	125.7	1.6e-37	N/A	unknown function
UniRef90	UHGV-1363431_19	UniRef90_R5ILV2	88.2	0.0000000000000168	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1363431_19	411471.SUBVAR_06932	293.0	0	N/A	N/A
structural_annotation	UHGV-1363431_19	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1363431_20	411471.SUBVAR_06933	78.2	8.08e-17	N/A	N/A
structural_annotation	UHGV-1363431_20	PF20458,TIGR02126,COG4718	N/A	N/A	N/A	N/A
PHROG	UHGV-1363431_21	phrog_1535	80.5	1.8e-37	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1363431_21	397288.C806_01518	109.0	1.65e-21	Phage-related minor tail protein	N/A
COG	UHGV-1363431_21	COG5283	N/A	N/A	Phage-related tail protein	N/A
UniRef90	UHGV-1363431_23	UniRef90_UPI001D0975F6	78.2	2.2e-16	N/A	N/A
PHROG	UHGV-1363431_24	phrog_158	67.9	2.1e-19	major tail protein	tail
UniRef90	UHGV-1363431_24	UniRef90_D7GNW1	96.7	6.03e-23	Phage tail protein	N/A
eggNOG-mapper	UHGV-1363431_24	1158607.UAU_01767	63.2	0.000000000126	Phage tail tube protein, TTP	N/A
structural_annotation	UHGV-1363431_24	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1363431_25	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1363431_27	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1363431_28	phrog_132	50.2	0.000000000000036	head-tail adaptor	connector
UniRef90	UHGV-1363431_28	UniRef90_R6N215	92.8	2.71e-22	Phage QLRG family putative DNA packaging	N/A
eggNOG-mapper	UHGV-1363431_28	673832.D2IYW8_9CAUD	54.3	0.0000000861	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1363431_28	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-1363431_28	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-1363431_28	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1363431_29	phrog_247	235.5	0	major head protein	head and packaging
UniRef90	UHGV-1363431_29	UniRef90_UPI001BA5448B	224.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-1363431_29	33035.JPJF01000106_gene3132	278.0	0	N/A	N/A
Pfam	UHGV-1363431_29	PF20036	N/A	N/A	Major capsid protein 13-like	Gp13-like
structural_annotation	UHGV-1363431_29	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1363431_31	phrog_64	187.5	0	portal protein	head and packaging
UniRef90	UHGV-1363431_31	UniRef90_UPI001D06C00B	374.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1363431_31	1121866.AUGK01000003_gene1429	328.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1363431_31	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1363431_31	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1363431_33	phrog_38	179.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-1363431_33	UniRef90_UPI00164E3A67	457.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1363431_33	1123263.AUKY01000015_gene1608	300.0	0	chromosome segregation	N/A
COG	UHGV-1363431_33	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1363431_33	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-1363431_34	phrog_4707	86.7	9.1e-26	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1363431_34	742741.HMPREF9475_03963	115.0	2.05e-27	N/A	N/A
Pfam	UHGV-1363431_34	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-1363431_34	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1363431_34	PF01978,TIGR04176,COG3355	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1363431_35	PF19607	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1363431_36	PF17613,COG2139	N/A	N/A	N/A	N/A
KOfam	UHGV-1363431_39	K01520	136.4	2.29999e-40	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1363431_39	phrog_135	127.2	8.9e-38	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1363431_39	UniRef90_A0A6A2VG41	171.0	0	Deoxyuridine 5'-triphosphate nucleotidohydrolase	N/A
eggNOG-mapper	UHGV-1363431_39	1282887.AUJG01000016_gene1113	145.0	8.75952e-42	N/A	N/A
Pfam	UHGV-1363431_39	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-1363431_39	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-1363431_39	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1363431_39	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-1363431_41	phrog_236	78.8	1.2e-22	nucleotide kinase	other
UniRef90	UHGV-1363431_41	UniRef90_A0A521U4K6	92.0	4.46e-22	N/A	N/A
eggNOG-mapper	UHGV-1363431_41	397290.C810_01372	64.7	0.00000000000491	N/A	N/A
Pfam	UHGV-1363431_41	PF11753	N/A	N/A	N/A	DUF3310
KOfam	UHGV-1363431_42	K03465	189.9	0	thyX, thy1; thymidylate synthase (FAD) [EC:2.1.1.148]	N/A
PHROG	UHGV-1363431_42	phrog_85	133.2	9.5e-40	thymidylate synthase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1363431_42	UniRef90_A0A2A7ALC5	240.0	0	Flavin-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-1363431_42	657322.FPR_23400	222.0	0	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant	N/A
Pfam	UHGV-1363431_42	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
NCBIFam	UHGV-1363431_42	TIGR02170.1	N/A	N/A	FAD-dependent thymidylate synthase	N/A
COG	UHGV-1363431_42	COG1351	N/A	N/A	Thymidylate synthase ThyX, FAD-dependent family	N/A
HAMAP	UHGV-1363431_42	MF_01408	N/A	N/A	Flavin-dependent thymidylate synthase [thyX]	N/A
structural_annotation	UHGV-1363431_42	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-1363431_45	phrog_1233	91.8	8.1e-27	N/A	unknown function
eggNOG-mapper	UHGV-1363431_45	936375.HMPREF1152_1074	111.0	2.31e-30	N/A	N/A
structural_annotation	UHGV-1363431_50	PF21662,MF_00683,NF010673	N/A	N/A	N/A	N/A
PHROG	UHGV-1363431_52	phrog_1909	110.7	1.1e-32	N/A	unknown function
structural_annotation	UHGV-1363431_52	TIGR01651,COG4547	N/A	N/A	N/A	N/A
KOfam	UHGV-1363431_53	K09882	116.7	2.1e-34	cobS; cobaltochelatase CobS [EC:6.6.1.2]	N/A
PHROG	UHGV-1363431_53	phrog_249	174.3	0	porphyrin biosynthesis	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1363431_53	UniRef90_UPI0006961AD7	266.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1363431_53	402612.FP2177	188.0	0	AAA domain (dynein-related subfamily)	N/A
Pfam	UHGV-1363431_53	PF07728	N/A	N/A	AAA domain (dynein-related subfamily)	AAA_5
COG	UHGV-1363431_53	COG0714	N/A	N/A	MoxR-like ATPase	N/A
structural_annotation	UHGV-1363431_53	PF07728,MF_03121,TIGR02640,COG0714	N/A	N/A	N/A	N/A
PHROG	UHGV-1363431_57	phrog_244	73.7	2.8e-21	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1363431_57	UniRef90_A0A841R0Q1	103.0	3.46e-26	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-1363431_57	1410650.JHWL01000003_gene2849	103.0	6.88e-27	N/A	N/A
KOfam	UHGV-1363431_58	K02314	211.8	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-1363431_58	phrog_19	227.8	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1363431_58	UniRef90_A0A316NVS3	236.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-1363431_58	1203606.HMPREF1526_01325	150.0	4.87e-38	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-1363431_58	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-1363431_58	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-1363431_58	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1363431_58	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-1363431_61	phrog_16304	60.1	5.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-1363431_61	768706.Desor_0679	77.8	0.00000000000000253	N/A	N/A
PHROG	UHGV-1363431_62	phrog_28936	138.4	3.59994e-41	N/A	unknown function
eggNOG-mapper	UHGV-1363431_62	573061.Clocel_3563	103.0	1.49e-24	N/A	N/A
structural_annotation	UHGV-1363431_62	PF11645,MF_01490,NF040854	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1363431_63	PF00436,MF_00984,NF005242,COG2965	N/A	N/A	N/A	N/A
PHROG	UHGV-1363431_65	phrog_10048	59.9	1.4e-29	N/A	unknown function
eggNOG-mapper	UHGV-1363431_65	1094508.Tsac_2442	129.0	9.26e-34	N/A	N/A
structural_annotation	UHGV-1363431_65	PF06420,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-1363431_66	phrog_3377	105.0	6.9e-31	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1363431_66	UniRef90_A0A855XMH1	82.8	1.92e-17	NUMOD1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1363431_66	742767.HMPREF9456_02044	90.5	6.11e-21	N/A	N/A
PHROG	UHGV-1363431_67	phrog_298	67.8	3.3e-20	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1363431_67	UniRef90_UPI001ABE80F6	92.0	1.2e-19	PD-(D/E)XK nuclease family protein	N/A
structural_annotation	UHGV-1363431_67	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-1363431_69	phrog_9958	97.2	1.3e-28	N/A	unknown function
UniRef90	UHGV-1363431_69	UniRef90_UPI001D08A241	126.0	7.44e-34	N/A	N/A
eggNOG-mapper	UHGV-1363431_69	1160721.RBI_I01591	114.0	5.54e-30	N/A	N/A
structural_annotation	UHGV-1363431_70	NF007260	N/A	N/A	N/A	N/A
PHROG	UHGV-1363431_73	phrog_8060	56.5	5.9e-16	N/A	unknown function
eggNOG-mapper	UHGV-1363431_73	665942.HMPREF1022_02660	58.5	0.0000000494	HNH nucleases	N/A
Pfam	UHGV-1363431_73	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1363431_74	COG4226	N/A	N/A	Predicted nuclease of the RNAse H fold, HicB family	N/A
structural_annotation	UHGV-1363431_74	PF16225,TIGR04550,COG4226	N/A	N/A	N/A	N/A