UHGV-1364570 (vOTU-055634)

Viral Genome: UHGV-1364570

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1364570
vOTU ID	vOTU-055634
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0268482
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9769
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	27.51
Jumbo phage	No

Genome content
Genome length (bp)	39,871
GC content	51.20%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	54
CDS density	96%
Average CDS length (bps)	706.83
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1364570_2	K16628	93.3	1e-27	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-1364570_2	phrog_819	178.6	0	tail protein	tail
UniRef90	UHGV-1364570_2	UniRef90_A0A8D9PE13	599.0	0	Virion structural protein	N/A
Pfam	UHGV-1364570_2	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1364570_2	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-1364570_3	phrog_3287	131.8	2.9e-39	virion structural protein	head and packaging
eggNOG-mapper	UHGV-1364570_3	665956.HMPREF1032_03917	476.0	0	N/A	N/A
structural_annotation	UHGV-1364570_3	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
PHROG	UHGV-1364570_5	phrog_15239	40.6	0.000000000032	N/A	unknown function
PHROG	UHGV-1364570_6	phrog_1357	242.1	0	major head protein	head and packaging
UniRef90	UHGV-1364570_6	UniRef90_A0A8D9UHB3	568.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1364570_6	696281.Desru_1092	286.0	0	N/A	N/A
NCBIFam	UHGV-1364570_6	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1364570_6	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1364570_7	UniRef90_A0A8D9UHB9	412.0	0	Non-structural protein 5	N/A
UniRef90	UHGV-1364570_8	UniRef90_A0A8D9UHD6	119.0	3.91e-34	Ogr/Delta-like zinc finger	N/A
structural_annotation	UHGV-1364570_8	PF20020	N/A	N/A	N/A	N/A
PHROG	UHGV-1364570_9	phrog_156	170.5	0	portal protein	head and packaging
UniRef90	UHGV-1364570_9	UniRef90_A0A8D9UHD1	1097.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1364570_9	1121091.AUMP01000003_gene2583	363.0	0	N/A	N/A
structural_annotation	UHGV-1364570_9	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-1364570_10	K06909	137.3	1.2e-40	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1364570_10	phrog_979	165.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-1364570_10	UniRef90_A0A8D9UH35	927.0	0	Large subunit terminase	N/A
eggNOG-mapper	UHGV-1364570_10	1232449.BAHV02000016_gene1824	472.0	0	N/A	N/A
Pfam	UHGV-1364570_10	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1364570_10	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1364570_10	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-1364570_11	UniRef90_A0A8D9UHF6	167.0	0	N/A	N/A
eggNOG-mapper	UHGV-1364570_11	272630.MexAM1_META1p3985	54.3	0.0000000367	N/A	N/A
PHROG	UHGV-1364570_12	phrog_7339	102.4	3.7e-30	DNA repair exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1364570_12	UniRef90_A0A2V2GLL9	435.0	0	Metallophos_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1364570_12	1150474.JQJI01000006_gene784	90.9	7.04e-19	metallophosphoesterase	N/A
Pfam	UHGV-1364570_12	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-1364570_12	COG1408	N/A	N/A	Predicted phosphohydrolase, MPP superfamily	N/A
structural_annotation	UHGV-1364570_12	PF12850,MF_00325,NF003118,COG1311	N/A	N/A	N/A	N/A
PHROG	UHGV-1364570_15	phrog_36	44.7	0.000000000002	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-1364570_15	428125.CLOLEP_01806	76.3	0.00000000000000161	N/A	N/A
Pfam	UHGV-1364570_15	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-1364570_15	PF07374,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1364570_20	phrog_3777	81.1	7.9e-24	N/A	unknown function
UniRef90	UHGV-1364570_20	UniRef90_A0A417F883	142.0	4.74003e-41	N/A	N/A
eggNOG-mapper	UHGV-1364570_20	411462.DORLON_00813	68.9	0.000000000000274	N/A	N/A
Pfam	UHGV-1364570_20	PF12957	N/A	N/A	N/A	DUF3846
structural_annotation	UHGV-1364570_20	PF12957	N/A	N/A	N/A	N/A
PHROG	UHGV-1364570_24	phrog_1271	40.9	0.000000000035	HNH endonuclease	DNA, RNA and nucleotide metabolism
structural_annotation	UHGV-1364570_24	TIGR04381	N/A	N/A	N/A	N/A
KOfam	UHGV-1364570_26	K01160	67.5	3e-19	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1364570_26	phrog_34	71.4	1.4e-20	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1364570_26	UniRef90_A0A498CNH4	153.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1364570_26	477974.Daud_0813	52.8	0.000000975	N/A	N/A
Pfam	UHGV-1364570_26	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
structural_annotation	UHGV-1364570_26	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-1364570_27	K00571	106.4	3.2e-31	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1364570_27	phrog_67	96.3	5.1e-29	DNA methyltransferase	other
UniRef90	UHGV-1364570_27	UniRef90_A0A1C6E5W1	442.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1364570_27	1449342.JQMR01000001_gene1025	374.0	0	DNA modification methylase DNA replication, recombination, and repair	N/A
PADLOC	UHGV-1364570_27	MTase_II_00157	80.4	2.9e-24	Type II methyltransferase	RM
Pfam	UHGV-1364570_27	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1364570_27	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1364570_27	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1364570_28	phrog_9804	173.6	0	N/A	unknown function
UniRef90	UHGV-1364570_28	UniRef90_UPI001E312ACC	300.0	0	replicative helicase loader/inhibitor	N/A
eggNOG-mapper	UHGV-1364570_28	1121344.JHZO01000003_gene981	181.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-1364570_28	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-1364570_28	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-1364570_29	phrog_16304	88.5	8.4e-26	N/A	unknown function
UniRef90	UHGV-1364570_29	UniRef90_UPI001E560709	409.0	0	N/A	N/A
eggNOG-mapper	UHGV-1364570_29	290402.Cbei_3733	61.6	0.0000000137	DnaD domain protein	N/A
Pfam	UHGV-1364570_29	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-1364570_29	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1364570_29	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-1364570_30	K03111	133.2	2.8e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1364570_30	phrog_44	135.4	3.60001e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1364570_30	UniRef90_UPI001E2A5A6F	228.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1364570_30	445972.ANACOL_01827	129.0	1.32e-36	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1364570_30	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1364570_30	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1364570_30	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1364570_30	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1364570_30	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1364570_31	phrog_7566	52.6	0.0000000000000062	N/A	unknown function
eggNOG-mapper	UHGV-1364570_31	693746.OBV_24070	69.3	0.0000000000000965	N/A	N/A
PHROG	UHGV-1364570_32	phrog_72	57.2	2.3e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1364570_32	UniRef90_A0A8D9PDS2	161.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-1364570_32	445972.ANACOL_01825	144.0	2.03006e-41	N/A	N/A
structural_annotation	UHGV-1364570_32	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-1364570_33	phrog_659	205.0	0	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1364570_33	UniRef90_UPI001E5A6693	337.0	0	N/A	N/A
eggNOG-mapper	UHGV-1364570_33	1507.HMPREF0262_00431	221.0	0	N/A	N/A
Pfam	UHGV-1364570_33	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-1364570_33	PF06378,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1364570_35	phrog_4433	145.4	0	N/A	unknown function
eggNOG-mapper	UHGV-1364570_35	394503.Ccel_3068	122.0	1.99e-32	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1364570_35	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-1364570_38	NF041588	N/A	N/A	N/A	N/A
UniRef90	UHGV-1364570_40	UniRef90_UPI001967CDDD	85.5	1.26e-20	helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-1364570_40	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1364570_40	PF13560,NF040507,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1364570_41	phrog_8	50.4	0.000000000000051	transcriptional regulator	transcription regulation
UniRef90	UHGV-1364570_41	UniRef90_UPI001E54DE4F	119.0	4.7e-33	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1364570_41	1378168.N510_01712	80.1	7.74e-17	N/A	N/A
Pfam	UHGV-1364570_41	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1364570_41	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1364570_42	UniRef90_UPI001E2EC555	199.0	0	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-1364570_42	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1364570_42	COG3620	N/A	N/A	Predicted transcriptional regulator, contains an XRE-type HTH domain (archaeal members contain CBS pair)	N/A
structural_annotation	UHGV-1364570_42	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1364570_45	K14059	208.8	0	int; integrase	N/A
PHROG	UHGV-1364570_45	phrog_1	183.5	0	integrase	integration and excision
UniRef90	UHGV-1364570_45	UniRef90_A0A8D9PE11	346.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1364570_45	693746.OBV_01970	154.0	9.07004e-41	Phage integrase family	N/A
Pfam	UHGV-1364570_45	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1364570_45	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1364570_45	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1364570_46	phrog_30118	113.8	4.3e-34	N/A	unknown function
eggNOG-mapper	UHGV-1364570_46	445971.ANASTE_00728	278.0	0	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair	N/A
Pfam	UHGV-1364570_46	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
Pfam	UHGV-1364570_46	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-1364570_46	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
structural_annotation	UHGV-1364570_47	MF_01304	N/A	N/A	N/A	N/A
KOfam	UHGV-1364570_48	K01448	57.3	2e-16	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1364570_48	phrog_435	69.0	8.4e-20	endolysin	lysis
UniRef90	UHGV-1364570_48	UniRef90_A0A2V2GRI9	466.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1364570_48	994573.T472_0210960	93.2	2.39e-20	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-1364570_48	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-1364570_48	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1364570_48	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1364570_49	1347392.CCEZ01000017_gene1158	49.7	0.00000263	N/A	N/A
PHROG	UHGV-1364570_50	phrog_1863	62.0	5.4e-18	N/A	unknown function
eggNOG-mapper	UHGV-1364570_50	718252.FP2_04900	77.4	1.18e-17	N/A	N/A
PHROG	UHGV-1364570_51	phrog_2310	56.6	2.4e-16	N/A	unknown function
eggNOG-mapper	UHGV-1364570_51	1415774.U728_3409	52.0	0.0000000183	N/A	N/A
KOfam	UHGV-1364570_53	K10457	66.2	1.8e-19	KLHL20, KLEIP; kelch-like protein 20	N/A
UniRef90	UHGV-1364570_53	UniRef90_A0A8D9PDI7	92.4	1.21e-16	mRNA splicing protein	N/A
Pfam	UHGV-1364570_53	PF13964	N/A	N/A	Kelch motif	Kelch_6
Pfam	UHGV-1364570_53	PF13854	N/A	N/A	Kelch motif	Kelch_5
Pfam	UHGV-1364570_53	PF13418	N/A	N/A	Galactose oxidase, central domain	Kelch_4
COG	UHGV-1364570_53	COG3055	N/A	N/A	N-acetylneuraminic acid mutarotase	N/A
structural_annotation	UHGV-1364570_53	PF16472,MF_01195,TIGR03548,COG3055	N/A	N/A	N/A	N/A
Pfam	UHGV-1364570_54	PF13964	N/A	N/A	Kelch motif	Kelch_6
structural_annotation	UHGV-1364570_54	PF16472,MF_01195,TIGR03548,COG3055	N/A	N/A	N/A	N/A