UHGV-1365510 (vOTU-055792)

Viral Genome: UHGV-1365510

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1365510
vOTU ID	vOTU-055792
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0265242
Associated BioSample	SAMEA3665063
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	11
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9797
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	15.24
Jumbo phage	No

Genome content
Genome length (bp)	39,250
GC content	51.94%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	52
CDS density	96%
Average CDS length (bps)	723.40
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1365510_1	1121423.JONT01000003_gene974	53.5	0.000000379	N/A	N/A
PHROG	UHGV-1365510_2	phrog_36	44.8	0.0000000000023	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-1365510_2	428125.CLOLEP_01806	80.5	3.7e-17	N/A	N/A
structural_annotation	UHGV-1365510_2	PF07374,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1365510_4	phrog_22543	47.0	0.00000000000041	N/A	unknown function
UniRef90	UHGV-1365510_4	UniRef90_A0A8D9PDT5	70.9	0.000000000000105	Hydrogenase/urease nickel incorporation protein	N/A
PHROG	UHGV-1365510_7	phrog_3136	130.5	4.1e-39	N/A	unknown function
UniRef90	UHGV-1365510_7	UniRef90_UPI001A9A8D4F	138.0	3.51e-38	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1365510_7	97139.C824_00742	76.6	0.00000000000000299	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-1365510_7	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1365510_7	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1365510_10	phrog_1271	40.9	0.000000000036	HNH endonuclease	DNA, RNA and nucleotide metabolism
structural_annotation	UHGV-1365510_10	TIGR04381	N/A	N/A	N/A	N/A
KOfam	UHGV-1365510_12	K01160	68.4	1.8e-19	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1365510_12	phrog_34	69.2	6.5e-20	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1365510_12	UniRef90_A0A498CNH4	142.0	1.76003e-41	RusA family crossover junction endodeoxyribonuclease	N/A
structural_annotation	UHGV-1365510_12	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1365510_13	phrog_9804	163.5	0	N/A	unknown function
UniRef90	UHGV-1365510_13	UniRef90_UPI001E312ACC	360.0	0	replicative helicase loader/inhibitor	N/A
eggNOG-mapper	UHGV-1365510_13	1121344.JHZO01000003_gene981	178.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-1365510_13	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-1365510_13	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-1365510_14	phrog_16304	90.6	2.1e-26	N/A	unknown function
UniRef90	UHGV-1365510_14	UniRef90_UPI001E560709	422.0	0	N/A	N/A
eggNOG-mapper	UHGV-1365510_14	290402.Cbei_3733	61.6	0.0000000132	DnaD domain protein	N/A
Pfam	UHGV-1365510_14	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-1365510_14	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1365510_14	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-1365510_15	K03111	133.3	2.7e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1365510_15	phrog_44	134.6	6.8e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1365510_15	UniRef90_UPI001E2A5A6F	225.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1365510_15	1235835.C814_01372	126.0	2.38e-35	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1365510_15	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1365510_15	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1365510_15	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1365510_15	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1365510_15	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1365510_16	phrog_7566	52.8	0.0000000000000058	N/A	unknown function
eggNOG-mapper	UHGV-1365510_16	693746.OBV_24070	70.9	0.0000000000000241	N/A	N/A
PHROG	UHGV-1365510_17	phrog_72	54.8	0.0000000000000014	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1365510_17	UniRef90_A0A8D9PDS2	162.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-1365510_17	445972.ANACOL_01825	142.0	8.14995e-41	N/A	N/A
structural_annotation	UHGV-1365510_17	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-1365510_18	phrog_14970	190.6	0	N/A	unknown function
UniRef90	UHGV-1365510_18	UniRef90_UPI00123F00F5	175.0	0	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-1365510_18	428127.EUBDOL_01248	153.0	7.00649e-44	double-strand break repair protein	N/A
Pfam	UHGV-1365510_18	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-1365510_18	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-1365510_18	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1365510_22	NF041588	N/A	N/A	N/A	N/A
UniRef90	UHGV-1365510_24	UniRef90_A0A372V3V8	68.9	0.0000000000000452	XRE family transcriptional regulator	N/A
structural_annotation	UHGV-1365510_24	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1365510_25	phrog_8	55.9	0.0000000000000011	transcriptional regulator	transcription regulation
UniRef90	UHGV-1365510_25	UniRef90_UPI001E54DE4F	97.4	3.47e-24	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1365510_25	411483.FAEPRAA2165_00756	81.6	1.21e-17	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
COG	UHGV-1365510_25	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1365510_25	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1365510_26	UniRef90_UPI001E2EC555	211.0	0	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-1365510_26	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1365510_26	COG3620	N/A	N/A	Predicted transcriptional regulator, contains an XRE-type HTH domain (archaeal members contain CBS pair)	N/A
structural_annotation	UHGV-1365510_26	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1365510_29	K14059	204.8	0	int; integrase	N/A
PHROG	UHGV-1365510_29	phrog_1	184.0	0	integrase	integration and excision
UniRef90	UHGV-1365510_29	UniRef90_A0A8D9PE11	349.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1365510_29	693746.OBV_01970	155.0	4.65007e-41	Phage integrase family	N/A
Pfam	UHGV-1365510_29	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1365510_29	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1365510_29	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1365510_30	phrog_30118	115.2	1.9e-34	N/A	unknown function
eggNOG-mapper	UHGV-1365510_30	445971.ANASTE_00728	281.0	0	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair	N/A
Pfam	UHGV-1365510_30	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
Pfam	UHGV-1365510_30	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-1365510_30	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
structural_annotation	UHGV-1365510_31	MF_01304	N/A	N/A	N/A	N/A
KOfam	UHGV-1365510_32	K01448	61.5	1.2e-17	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1365510_32	phrog_435	74.5	2e-21	endolysin	lysis
UniRef90	UHGV-1365510_32	UniRef90_A0A2V2GRI9	469.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1365510_32	994573.T472_0210960	96.3	1.71e-21	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-1365510_32	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-1365510_32	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1365510_32	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1365510_33	1347392.CCEZ01000043_gene405	55.1	0.0000000208	N/A	N/A
PHROG	UHGV-1365510_34	phrog_37604	62.7	4.7e-18	N/A	unknown function
eggNOG-mapper	UHGV-1365510_34	457412.RSAG_01109	62.0	0.000000000286	N/A	N/A
PHROG	UHGV-1365510_35	phrog_27545	115.5	3.8e-34	N/A	unknown function
UniRef90	UHGV-1365510_35	UniRef90_A0A2V2GQB6	295.0	0	Chitin-binding type-3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1365510_35	411471.SUBVAR_06976	133.0	5.99e-38	N/A	N/A
Pfam	UHGV-1365510_35	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
PHROG	UHGV-1365510_38	phrog_29409	147.6	3.36312e-44	N/A	unknown function
UniRef90	UHGV-1365510_38	UniRef90_A0A2V2GQ35	271.0	0	Isoaspartyl peptidase	N/A
PHROG	UHGV-1365510_39	phrog_37900	260.7	0	N/A	unknown function
UniRef90	UHGV-1365510_39	UniRef90_A0A2V2GLK0	397.0	0	N/A	N/A
eggNOG-mapper	UHGV-1365510_39	552398.HMPREF0866_03098	200.0	0	N/A	N/A
Pfam	UHGV-1365510_39	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1365510_39	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1365510_39	PF19789,PF03785	N/A	N/A	N/A	N/A
KOfam	UHGV-1365510_40	K19721	164.1	0	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	N/A
PHROG	UHGV-1365510_40	phrog_819	146.8	0	tail protein	tail
UniRef90	UHGV-1365510_40	UniRef90_A0A8D9PE13	748.0	0	Virion structural protein	N/A
eggNOG-mapper	UHGV-1365510_40	33035.JPJF01000033_gene2261	58.2	0.00000889	tail collar domain protein	N/A
Pfam	UHGV-1365510_40	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1365510_40	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-1365510_41	phrog_3287	132.5	2.3e-39	virion structural protein	head and packaging
eggNOG-mapper	UHGV-1365510_41	665956.HMPREF1032_03917	480.0	0	N/A	N/A
structural_annotation	UHGV-1365510_41	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
PHROG	UHGV-1365510_43	phrog_15239	42.3	0.000000000011	N/A	unknown function
PHROG	UHGV-1365510_44	phrog_1357	242.7	0	major head protein	head and packaging
UniRef90	UHGV-1365510_44	UniRef90_A0A8D9UHB3	573.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1365510_44	696281.Desru_1092	278.0	0	N/A	N/A
NCBIFam	UHGV-1365510_44	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1365510_44	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1365510_45	UniRef90_A0A8D9UHB9	418.0	0	Non-structural protein 5	N/A
UniRef90	UHGV-1365510_46	UniRef90_A0A8D9UHD6	119.0	3.91e-34	Ogr/Delta-like zinc finger	N/A
structural_annotation	UHGV-1365510_46	PF20020	N/A	N/A	N/A	N/A
PHROG	UHGV-1365510_47	phrog_156	172.3	0	portal protein	head and packaging
UniRef90	UHGV-1365510_47	UniRef90_A0A8D9UHD1	1061.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1365510_47	1121091.AUMP01000003_gene2583	363.0	0	N/A	N/A
structural_annotation	UHGV-1365510_47	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-1365510_49	K06909	139.3	3.39997e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1365510_49	phrog_979	164.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-1365510_49	UniRef90_A0A8D9UH35	940.0	0	Large subunit terminase	N/A
eggNOG-mapper	UHGV-1365510_49	1232449.BAHV02000016_gene1824	480.0	0	N/A	N/A
Pfam	UHGV-1365510_49	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1365510_49	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1365510_49	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-1365510_50	UniRef90_A0A8D9UHF6	202.0	0	N/A	N/A
eggNOG-mapper	UHGV-1365510_50	272630.MexAM1_META1p3985	56.6	0.00000000407	N/A	N/A
Pfam	UHGV-1365510_50	PF18932	N/A	N/A	N/A	DUF5681
PHROG	UHGV-1365510_51	phrog_7339	99.5	3e-29	DNA repair exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1365510_51	UniRef90_A0A2V2GLL9	521.0	0	Metallophos_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1365510_51	1150474.JQJI01000006_gene784	97.1	3.67e-21	metallophosphoesterase	N/A
Pfam	UHGV-1365510_51	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-1365510_51	COG1408	N/A	N/A	Predicted phosphohydrolase, MPP superfamily	N/A
structural_annotation	UHGV-1365510_51	PF12850,MF_00325,NF003118,COG1311	N/A	N/A	N/A	N/A
PHROG	UHGV-1365510_52	phrog_10390	243.0	0	N/A	unknown function
UniRef90	UHGV-1365510_52	UniRef90_UPI00065E3BBF	264.0	0	N/A	N/A
eggNOG-mapper	UHGV-1365510_52	1121423.JONT01000003_gene973	257.0	0	N/A	N/A
Pfam	UHGV-1365510_52	PF13274	N/A	N/A	Antitoxin SocA-like, Panacea domain	SocA_Panacea
COG	UHGV-1365510_52	COG3600	N/A	N/A	N/A	N/A