UHGV-1368387 (vOTU-044922)

Viral Genome: UHGV-1368387

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1368387
vOTU ID	vOTU-044922
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-4421661
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9814
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	38.13
Jumbo phage	No

Genome content
Genome length (bp)	44,949
GC content	41.04%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	67
CDS density	91%
Average CDS length (bps)	612.94
Total tRNA genes	2
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1368387_1	phrog_21718	131.1	4.9e-39	N/A	unknown function
eggNOG-mapper	UHGV-1368387_1	476272.RUMHYD_01768	132.0	2.8e-37	N/A	N/A
PHROG	UHGV-1368387_2	phrog_22984	96.1	2e-28	N/A	unknown function
PHROG	UHGV-1368387_3	phrog_16490	189.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1368387_3	397290.C810_01328	187.0	0	N/A	N/A
PHROG	UHGV-1368387_4	phrog_20016	208.3	0	N/A	unknown function
UniRef90	UHGV-1368387_4	UniRef90_A0A285PT46	171.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1368387_4	397290.C810_05214	193.0	0	N/A	N/A
structural_annotation	UHGV-1368387_4	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1368387_5	phrog_28802	222.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1368387_5	476272.RUMHYD_01772	196.0	0	N/A	N/A
PHROG	UHGV-1368387_6	phrog_194	66.9	3.8e-19	head scaffolding protein	head and packaging
UniRef90	UHGV-1368387_6	UniRef90_UPI001D14C9C8	196.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1368387_6	476272.RUMHYD_01775	197.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-1368387_6	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-1368387_7	phrog_544	165.4	0	major head protein	head and packaging
UniRef90	UHGV-1368387_7	UniRef90_A0A395X7A1	720.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1368387_7	1232453.BAIF02000011_gene3359	388.0	0	N/A	N/A
Pfam	UHGV-1368387_7	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-1368387_7	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1368387_8	phrog_541	95.3	3e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-1368387_8	476272.RUMHYD_01778	111.0	7.07e-29	N/A	N/A
PHROG	UHGV-1368387_9	phrog_774	69.5	5.1e-20	N/A	unknown function
eggNOG-mapper	UHGV-1368387_9	397290.C810_05225	140.0	2.02067e-42	N/A	N/A
PHROG	UHGV-1368387_10	phrog_1129	75.8	3.6e-22	holin	lysis
UniRef90	UHGV-1368387_10	UniRef90_A0A395X7B2	174.0	0	Enolase	N/A
eggNOG-mapper	UHGV-1368387_10	411461.DORFOR_00721	113.0	1.02e-31	N/A	N/A
Pfam	UHGV-1368387_10	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1368387_10	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1368387_11	phrog_3366	98.7	5.2e-29	N/A	unknown function
eggNOG-mapper	UHGV-1368387_11	476272.RUMHYD_01779	159.0	0	N/A	N/A
structural_annotation	UHGV-1368387_11	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1368387_12	phrog_556	62.8	3.8e-18	minor head protein	head and packaging
UniRef90	UHGV-1368387_12	UniRef90_UPI000E4989EB	300.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1368387_12	476272.RUMHYD_01780	158.0	0	N/A	N/A
Pfam	UHGV-1368387_12	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1368387_12	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1368387_13	phrog_3266	92.0	4.8e-27	tail completion	connector
eggNOG-mapper	UHGV-1368387_13	476272.RUMHYD_01781	151.0	1.54143e-44	N/A	N/A
structural_annotation	UHGV-1368387_13	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1368387_14	phrog_3099	133.2	1.6e-39	N/A	unknown function
eggNOG-mapper	UHGV-1368387_14	411902.CLOBOL_00129	169.0	0	N/A	N/A
structural_annotation	UHGV-1368387_14	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1368387_15	phrog_11299	66.3	5.1e-19	N/A	unknown function
eggNOG-mapper	UHGV-1368387_15	411459.RUMOBE_01382	58.2	0.00000000822	N/A	N/A
structural_annotation	UHGV-1368387_15	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1368387_16	phrog_706	131.7	5e-39	N/A	unknown function
UniRef90	UHGV-1368387_16	UniRef90_UPI001BAD00AD	207.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1368387_16	411459.RUMOBE_01383	329.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1368387_16	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1368387_16	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1368387_17	phrog_1535	286.5	0	tail length tape measure protein	tail
UniRef90	UHGV-1368387_17	UniRef90_A0A173R880	663.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1368387_17	476272.RUMHYD_01785	706.0	0	phage tail tape measure protein	N/A
COG	UHGV-1368387_17	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1368387_17	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1368387_18	phrog_1194	62.2	7.6e-18	N/A	unknown function
eggNOG-mapper	UHGV-1368387_18	742733.HMPREF9469_01808	102.0	5.04e-26	N/A	N/A
Pfam	UHGV-1368387_18	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1368387_18	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1368387_19	phrog_18190	115.2	5.3e-34	N/A	unknown function
UniRef90	UHGV-1368387_19	UniRef90_UPI000E4C0A8F	1823.0	0	bacterial Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1368387_19	428125.CLOLEP_00457	160.0	2.13e-36	endo-1,4-beta-xylanase activity	N/A
Pfam	UHGV-1368387_19	PF07523	N/A	N/A	Bacterial Ig-like domain (group 3)	Big_3
Pfam	UHGV-1368387_19	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
COG	UHGV-1368387_19	COG0683	N/A	N/A	ABC-type branched-chain amino acid transport system, periplasmic component	N/A
structural_annotation	UHGV-1368387_19	PF13306,PF07523,PF05113,NF033848,NF040978,COG3500	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1368387_21	476272.RUMHYD_00002	95.9	1.76e-17	N/A	N/A
PHROG	UHGV-1368387_22	phrog_2310	44.2	0.0000000000018	N/A	unknown function
PHROG	UHGV-1368387_23	phrog_9589	76.2	4.3e-22	endolysin	lysis
UniRef90	UHGV-1368387_23	UniRef90_A0A6N9LGV5	462.0	0	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-1368387_23	1123075.AUDP01000020_gene1533	317.0	0	pathogenesis	N/A
Pfam	UHGV-1368387_23	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-1368387_23	COG3942	N/A	N/A	Surface antigen	N/A
structural_annotation	UHGV-1368387_23	PF08230,PF19087	N/A	N/A	N/A	N/A
KOfam	UHGV-1368387_24	K14059	99.1	6.4e-29	int; integrase	N/A
PHROG	UHGV-1368387_24	phrog_1	127.3	1.5e-37	integrase	integration and excision
UniRef90	UHGV-1368387_24	UniRef90_A0A6L8SXX0	790.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1368387_24	1235792.C808_05256	354.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1368387_24	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1368387_24	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1368387_24	PF00589,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1368387_25	UniRef90_A0A3A6GQZ1	188.0	0	Zinc ribbon domain-containing protein	N/A
COG	UHGV-1368387_25	COG2314	N/A	N/A	N/A	N/A
KOfam	UHGV-1368387_27	K22300	71.0	2.3e-20	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1368387_27	phrog_8	67.6	2.4e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-1368387_27	UniRef90_A0A395X7H2	219.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1368387_27	397288.C806_00131	95.9	1.57e-23	Transcriptional	N/A
PADLOC	UHGV-1368387_27	retron_type_VI_hth_cluster2_1	43.1	0.0000000000035	N/A	Retron
Pfam	UHGV-1368387_27	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1368387_27	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1368387_27	PF01381,MF_02017,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-1368387_28	UniRef90_A0A395X814	140.0	1.8301e-42	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1368387_28	1121289.JHVL01000079_gene1187	60.1	0.0000000000349	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1368387_28	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1368387_28	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1368387_29	phrog_463	214.3	0	anti-repressor	transcription regulation
UniRef90	UHGV-1368387_29	UniRef90_A0A3A6GZT3	462.0	0	Phage repressor protein	N/A
eggNOG-mapper	UHGV-1368387_29	411490.ANACAC_00813	248.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1368387_29	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1368387_29	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-1368387_29	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1368387_29	PF10552,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-1368387_30	phrog_6058	52.5	0.0000000000000049	N/A	unknown function
UniRef90	UHGV-1368387_30	UniRef90_A0A2V1JQ38	62.8	0.00000000009	Glycogen synthase	N/A
eggNOG-mapper	UHGV-1368387_30	742733.HMPREF9469_05094	60.8	0.0000000000857	N/A	N/A
structural_annotation	UHGV-1368387_35	NF011879	N/A	N/A	N/A	N/A
UniRef90	UHGV-1368387_36	UniRef90_R6RDX0	77.0	3.04e-17	Arginyl-tRNA synthetase	N/A
PHROG	UHGV-1368387_37	phrog_2872	244.0	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1368387_37	UniRef90_UPI0015715A02	374.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1368387_37	397290.C810_05165	338.0	0	AAA domain	N/A
Pfam	UHGV-1368387_37	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-1368387_37	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-1368387_38	phrog_18107	244.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1368387_38	397290.C810_05167	223.0	0	N/A	N/A
structural_annotation	UHGV-1368387_38	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-1368387_39	phrog_3490	159.0	0	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1368387_39	UniRef90_R9KEE1	268.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1368387_39	397290.C810_05169	268.0	0	ERCC4 domain	N/A
Pfam	UHGV-1368387_39	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-1368387_39	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
KOfam	UHGV-1368387_40	K02316	77.9	1.5e-22	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-1368387_40	phrog_11992	131.1	8e-39	N/A	unknown function
UniRef90	UHGV-1368387_40	UniRef90_A0A3A6GSV7	319.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-1368387_40	411460.RUMTOR_02069	127.0	2.6e-35	CHC2 zinc finger	N/A
PADLOC	UHGV-1368387_40	drt-UG29	46.4	0.00000000000034	DRT	DRT
Pfam	UHGV-1368387_40	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-1368387_40	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-1368387_40	PF01807,PF00401	N/A	N/A	N/A	N/A
PHROG	UHGV-1368387_41	phrog_8841	493.4	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1368387_41	UniRef90_A0A3A6GQS5	1273.0	0	N/A	N/A
eggNOG-mapper	UHGV-1368387_41	411460.RUMTOR_02070	526.0	0	N/A	N/A
Pfam	UHGV-1368387_41	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-1368387_41	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-1368387_41	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1368387_41	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A
KOfam	UHGV-1368387_42	K15255	248.2	0	PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]	N/A
PHROG	UHGV-1368387_42	phrog_325	262.9	0	Dda-like helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1368387_42	UniRef90_A0A2V2D011	874.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1368387_42	1121333.JMLH01000003_gene334	273.0	0	PIF1-like helicase	N/A
PADLOC	UHGV-1368387_42	cluster10	56.6	7.7e-19	RecD_0_IVD	CRISPR-CAS
Pfam	UHGV-1368387_42	PF05970	N/A	N/A	PIF1-like helicase	PIF1
COG	UHGV-1368387_42	COG0507	N/A	N/A	ATPase/5'-3' helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-1368387_42	PF05970,PF18350,MF_03176,TIGR02768,COG0507	N/A	N/A	N/A	N/A
PHROG	UHGV-1368387_46	phrog_17690	131.7	2.3e-39	N/A	unknown function
UniRef90	UHGV-1368387_46	UniRef90_A0A6L5XWF4	90.5	6.49e-21	3-dehydroquinate synthase	N/A
eggNOG-mapper	UHGV-1368387_46	476272.RUMHYD_03925	167.0	0	N/A	N/A
PHROG	UHGV-1368387_48	phrog_424	78.8	8.8e-23	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1368387_48	UniRef90_A0A373DE70	300.0	0	Phosphoadenosine phosphosulfate reductase	N/A
eggNOG-mapper	UHGV-1368387_48	1304866.K413DRAFT_1205	300.0	0	sulfate reduction	N/A
COG	UHGV-1368387_48	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
PHROG	UHGV-1368387_55	phrog_8684	89.9	1e-26	N/A	unknown function
UniRef90	UHGV-1368387_55	UniRef90_UPI000E48CB3D	209.0	0	YopX family protein	N/A
eggNOG-mapper	UHGV-1368387_55	411470.RUMGNA_02199	93.2	5.3e-22	N/A	N/A
Pfam	UHGV-1368387_55	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-1368387_55	PF09643,TIGR01671	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1368387_57	PF06107,COG4481	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1368387_59	397288.C806_00098	57.8	0.0000000198	N/A	N/A
structural_annotation	UHGV-1368387_60	PF02888,COG5570	N/A	N/A	N/A	N/A
KOfam	UHGV-1368387_62	K06909	385.6	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1368387_62	phrog_3717	150.1	9.80909e-45	terminase large subunit	head and packaging
UniRef90	UHGV-1368387_62	UniRef90_A0A6L8SYJ6	1040.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1368387_62	33035.JPJF01000106_gene3136	529.0	0	Terminase small subunit	N/A
Pfam	UHGV-1368387_62	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1368387_62	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1368387_62	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1368387_62	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1368387_62	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1368387_63	phrog_533	278.7	0	portal protein	head and packaging
UniRef90	UHGV-1368387_63	UniRef90_A0A1C6CDM8	704.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-1368387_63	33035.JPJF01000106_gene3135	541.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-1368387_63	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1368387_64	phrog_581	276.3	0	minor head protein	head and packaging
UniRef90	UHGV-1368387_64	UniRef90_A0A412EKN3	804.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1368387_64	33035.JPJF01000106_gene3134	357.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1368387_64	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1368387_64	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1368387_64	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1368387_65	phrog_3754	117.8	6.4e-35	N/A	unknown function
eggNOG-mapper	UHGV-1368387_65	476272.RUMHYD_01764	176.0	0	N/A	N/A
UniRef90	UHGV-1368387_66	UniRef90_A0A395X7A4	181.0	0	CTP synthase	N/A
eggNOG-mapper	UHGV-1368387_66	476272.RUMHYD_01766	122.0	5.31e-35	N/A	N/A