UHGV-1370270 (vOTU-056522)

Viral Genome: UHGV-1370270

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1370270
vOTU ID	vOTU-056522
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0220474
Associated BioSample	SAMEA4545371
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	21
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9821
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	37.29
Jumbo phage	No

Genome content
Genome length (bp)	31,577
GC content	54.14%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	54
CDS density	95%
Average CDS length (bps)	554.44
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1370270_1	phrog_1066	47.6	0.00000000000029	N/A	unknown function
eggNOG-mapper	UHGV-1370270_1	445975.COLSTE_02166	70.1	0.000000000000106	N/A	N/A
PHROG	UHGV-1370270_2	phrog_9	147.2	8.96831e-44	terminase large subunit	head and packaging
UniRef90	UHGV-1370270_2	UniRef90_UPI001D0087E2	445.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-1370270_2	1410630.JNKP01000001_gene1822	607.0	0	phage terminase, large subunit	N/A
COG	UHGV-1370270_2	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1370270_2	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1370270_3	phrog_104	227.3	0	portal protein	head and packaging
UniRef90	UHGV-1370270_3	UniRef90_A0A316PMS0	692.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1370270_3	748224.HMPREF9436_01468	683.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1370270_3	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1370270_3	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1370270_4	phrog_193	113.4	2.7e-33	head maturation protease	head and packaging
UniRef90	UHGV-1370270_4	UniRef90_A0A6N8H118	257.0	0	CdiA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1370270_4	748224.HMPREF9436_01469	238.0	0	N/A	N/A
COG	UHGV-1370270_4	COG5529	N/A	N/A	Phage-encoded DNA-binding protein ECs1768, contains HTH and DnaT DNA-binding domains	N/A
structural_annotation	UHGV-1370270_4	PF21814	N/A	N/A	N/A	N/A
UniRef90	UHGV-1370270_5	UniRef90_A0A133ZN96	67.4	0.00000000000485	Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein	N/A
eggNOG-mapper	UHGV-1370270_5	754027.HMPREF9554_00527	107.0	1.06e-28	N/A	N/A
PHROG	UHGV-1370270_6	phrog_1374	62.0	6.3e-18	N/A	unknown function
UniRef90	UHGV-1370270_6	UniRef90_A0A4R2SLJ8	54.7	0.0000000179	Transmembrane Fragile-X-F protein	N/A
eggNOG-mapper	UHGV-1370270_6	1203606.HMPREF1526_01891	61.6	0.0000000000205	N/A	N/A
structural_annotation	UHGV-1370270_6	TIGR04438	N/A	N/A	N/A	N/A
PHROG	UHGV-1370270_7	phrog_1793	83.5	3.3e-24	head scaffolding protein	head and packaging
UniRef90	UHGV-1370270_7	UniRef90_A0A412EZF6	122.0	1.34e-32	N/A	N/A
eggNOG-mapper	UHGV-1370270_7	1123263.AUKY01000068_gene501	115.0	1.58e-30	N/A	N/A
structural_annotation	UHGV-1370270_7	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1370270_8	phrog_10	139.1	3.30006e-41	major head protein	head and packaging
UniRef90	UHGV-1370270_8	UniRef90_A0A1Y4TJU9	444.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1370270_8	748224.HMPREF9436_00690	433.0	0	Phage capsid family	N/A
Pfam	UHGV-1370270_8	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1370270_8	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1370270_8	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1370270_8	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1370270_9	phrog_137	58.1	1.3e-16	head-tail adaptor Ad1	connector
UniRef90	UHGV-1370270_9	UniRef90_E2ZGA8	155.0	0	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-1370270_9	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-1370270_9	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-1370270_10	phrog_501	71.9	8.7e-21	head closure Hc1	connector
eggNOG-mapper	UHGV-1370270_10	748224.HMPREF9436_00693	153.0	0	N/A	N/A
structural_annotation	UHGV-1370270_10	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1370270_11	phrog_387	64.5	1.3e-18	neck protein	connector
eggNOG-mapper	UHGV-1370270_11	748224.HMPREF9436_00694	55.1	0.0000000173	N/A	N/A
PHROG	UHGV-1370270_12	phrog_123	66.5	4.5e-19	tail terminator	connector
UniRef90	UHGV-1370270_12	UniRef90_A0A139NAV0	120.0	3.88e-33	Phage-associated protein	N/A
eggNOG-mapper	UHGV-1370270_12	1280698.AUJS01000007_gene1043	115.0	6.16e-32	N/A	N/A
structural_annotation	UHGV-1370270_12	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-1370270_13	phrog_117	178.1	0	major tail protein	tail
UniRef90	UHGV-1370270_13	UniRef90_UPI0011829489	239.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1370270_13	748224.HMPREF9436_00696	227.0	0	domain, Protein	N/A
COG	UHGV-1370270_13	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1370270_13	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1370270_14	phrog_1526	79.7	2.8e-23	N/A	unknown function
eggNOG-mapper	UHGV-1370270_14	875454.BAEW01000017_gene1589	84.0	4.63e-20	N/A	N/A
PHROG	UHGV-1370270_15	phrog_1633	141.8	2.10055e-42	N/A	unknown function
UniRef90	UHGV-1370270_15	UniRef90_UPI000F7A0C2F	119.0	1.58e-32	N/A	N/A
eggNOG-mapper	UHGV-1370270_15	1214184.ALKY01000039_gene910	119.0	6.18e-33	N/A	N/A
Pfam	UHGV-1370270_15	PF17318	N/A	N/A	N/A	DUF5361
structural_annotation	UHGV-1370270_15	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-1370270_16	phrog_6900	247.3	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1370270_16	1121334.KB911068_gene2299	265.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-1370270_16	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-1370270_17	phrog_33	64.4	2.7e-18	distal tail protein Dit	tail
UniRef90	UHGV-1370270_17	UniRef90_A0A1C6H6D2	148.0	1.27e-40	Phage-related protein	N/A
eggNOG-mapper	UHGV-1370270_17	1160721.RBI_I01575	111.0	4.73e-27	Phage tail protein	N/A
COG	UHGV-1370270_17	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1370270_17	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1370270_18	phrog_1067	222.5	0	minor head protein	head and packaging
UniRef90	UHGV-1370270_18	UniRef90_A0A1C6H6B4	325.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1370270_18	1123263.AUKY01000068_gene489	273.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1370270_18	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1370270_18	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1370270_18	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1370270_18	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
Pfam	UHGV-1370270_19	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
structural_annotation	UHGV-1370270_20	PF20622,NF033814	N/A	N/A	N/A	N/A
PHROG	UHGV-1370270_23	phrog_30034	119.2	4.2e-35	N/A	unknown function
UniRef90	UHGV-1370270_23	UniRef90_A0A3D1XGA4	157.0	0	Chitin-binding type-3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1370270_23	1122971.BAME01000151_gene6566	107.0	5.55e-27	N/A	N/A
Pfam	UHGV-1370270_23	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
PHROG	UHGV-1370270_24	phrog_1863	69.9	2e-20	N/A	unknown function
eggNOG-mapper	UHGV-1370270_24	665956.HMPREF1032_03922	100.0	7.96e-27	N/A	N/A
PHROG	UHGV-1370270_25	phrog_1129	64.5	1.2e-18	holin	lysis
UniRef90	UHGV-1370270_25	UniRef90_R6H6W8	109.0	2.03e-29	Putative holin	N/A
eggNOG-mapper	UHGV-1370270_25	742740.HMPREF9474_03522	105.0	1.62e-28	N/A	N/A
Pfam	UHGV-1370270_25	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1370270_25	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-1370270_26	K07273	199.7	0	acm; lysozyme	N/A
PHROG	UHGV-1370270_26	phrog_291	155.3	0	endolysin	lysis
UniRef90	UHGV-1370270_26	UniRef90_A0A6S6X8V6	186.0	0	Putative Lysozyme	N/A
eggNOG-mapper	UHGV-1370270_26	1415775.U729_2621	148.0	2e-39	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1370270_26	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-1370270_26	PF01473	N/A	N/A	Putative cell wall binding repeat	Choline_bind_1
COG	UHGV-1370270_26	COG3103	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1370270_26	PF01183,PF19127,TIGR04035,TIGR04303,COG3757	N/A	N/A	N/A	N/A
KOfam	UHGV-1370270_27	K14059	213.1	0	int; integrase	N/A
PHROG	UHGV-1370270_27	phrog_1	215.0	0	integrase	integration and excision
UniRef90	UHGV-1370270_27	UniRef90_A0A1M5ZI50	311.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-1370270_27	1507.HMPREF0262_00307	193.0	0	Phage integrase family	N/A
Pfam	UHGV-1370270_27	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1370270_27	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1370270_27	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1370270_28	phrog_36767	58.3	9.8e-17	N/A	unknown function
UniRef90	UHGV-1370270_28	UniRef90_A0A8J6J1Y7	75.9	2.42e-16	N/A	N/A
Pfam	UHGV-1370270_28	PF10049	N/A	N/A	N/A	DUF2283
PHROG	UHGV-1370270_29	phrog_16443	60.7	2.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-1370270_29	938293.CAJU020000007_gene2122	60.1	0.00000000161	N/A	N/A
AcrCatalog	UHGV-1370270_29	cluster_1135	62.0	0.00000000000000875	NA	N/A
Pfam	UHGV-1370270_29	PF14446	N/A	N/A	Prokaryotic RING finger family 1	Prok-RING_1
PHROG	UHGV-1370270_30	phrog_87	41.7	0.000000000014	metallo-protease	other
UniRef90	UHGV-1370270_30	UniRef90_A0A645CPE8	99.8	4.88e-24	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-1370270_30	428125.CLOLEP_02739	61.2	0.00000000071	N/A	N/A
COG	UHGV-1370270_30	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1370270_30	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-1370270_31	K22299	63.4	5e-18	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1370270_31	phrog_8	72.2	1e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-1370270_31	UniRef90_UPI001C10ECCC	99.8	6.5e-25	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1370270_31	1356854.N007_01920	72.0	0.0000000000000093	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1370270_31	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1370270_31	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1370270_31	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1370270_32	K07729	43.3	0.0000000000072	K07729; putative transcriptional regulator	N/A
UniRef90	UHGV-1370270_32	UniRef90_UPI001C11203C	82.0	5.7e-19	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1370270_32	246194.CHY_1696	47.4	0.00000427	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-1370270_32	retron_type_VI_hth_cluster2_1	40.0	0.00000000011	N/A	Retron
Pfam	UHGV-1370270_32	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1370270_32	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1370270_32	PF12844,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1370270_33	PF20385,NF040556	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1370270_36	PF00412	N/A	N/A	N/A	N/A
PHROG	UHGV-1370270_38	phrog_155	143.9	1.00053e-42	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1370270_38	UniRef90_UPI001439856C	182.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-1370270_38	97138.C820_00777	179.0	0	ERF superfamily	N/A
Pfam	UHGV-1370270_38	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1370270_38	PF04404,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1370270_39	phrog_72	54.3	0.0000000000000012	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1370270_39	UniRef90_UPI000C7BF263	118.0	1.73e-30	recombination protein NinB	N/A
eggNOG-mapper	UHGV-1370270_39	445972.ANACOL_01825	129.0	1.56e-35	N/A	N/A
structural_annotation	UHGV-1370270_39	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-1370270_40	phrog_7370	51.1	0.000000000000021	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1370270_40	UniRef90_A0A3D3Y4P7	132.0	2.84e-38	HNH domain-containing protein	N/A
Pfam	UHGV-1370270_40	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1370270_40	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1370270_41	phrog_2600	109.1	5.3e-32	N/A	unknown function
eggNOG-mapper	UHGV-1370270_41	1415774.U728_3767	131.0	1.11e-34	N/A	N/A
UniRef90	UHGV-1370270_42	UniRef90_UPI001F4CC127	67.4	0.000000000000139	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-1370270_42	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
structural_annotation	UHGV-1370270_42	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-1370270_43	K03111	136.9	2.29999e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1370270_43	phrog_44	137.5	8.69996e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1370270_43	UniRef90_A0A2V2CEG7	160.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1370270_43	693746.OBV_19910	147.0	4.76441e-44	Single-strand binding protein family	N/A
Pfam	UHGV-1370270_43	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1370270_43	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1370270_43	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1370270_43	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1370270_43	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1370270_44	phrog_678	53.5	0.0000000000000055	replication initiation O-like	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1370270_44	1120998.AUFC01000013_gene2941	57.4	0.000000432	N/A	N/A
structural_annotation	UHGV-1370270_46	NF037951	N/A	N/A	N/A	N/A
KOfam	UHGV-1370270_48	K00390	118.9	2.5e-35	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1370270_48	phrog_424	131.2	4e-39	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1370270_48	UniRef90_A0A1Y4LU27	418.0	0	Adenylyl-sulfate reductase	N/A
eggNOG-mapper	UHGV-1370270_48	1408437.JNJN01000032_gene2312	363.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-1370270_48	BrxP_00001	66.0	2.1e-19	BrxP	BREX
Pfam	UHGV-1370270_48	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1370270_48	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1370270_48	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1370270_51	phrog_3584	159.7	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1370270_51	1203606.HMPREF1526_00985	176.0	0	N/A	N/A
structural_annotation	UHGV-1370270_51	PF01446,NF041486	N/A	N/A	N/A	N/A
PHROG	UHGV-1370270_52	phrog_36	79.4	4.6e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-1370270_52	UniRef90_UPI000492AC93	63.2	0.000000000733	N/A	N/A
eggNOG-mapper	UHGV-1370270_52	936572.HMPREF1148_0670	66.2	0.00000000000793	N/A	N/A
structural_annotation	UHGV-1370270_52	PF07374,MF_00674,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1370270_53	phrog_338	61.8	1.4e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1370270_53	UniRef90_UPI0015F33F36	179.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1370270_53	748224.HMPREF9436_01465	175.0	0	N/A	N/A