UHGV-1372536 (vOTU-057007)

Viral Genome: UHGV-1372536

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1372536
vOTU ID	vOTU-057007
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0247178
Associated BioSample	SAMEA2581977
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9825
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	24.38
Jumbo phage	No

Genome content
Genome length (bp)	36,219
GC content	56.08%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	65
CDS density	93%
Average CDS length (bps)	516.00
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1372536_1	phrog_12	100.4	1.6e-29	portal protein	head and packaging
UniRef90	UHGV-1372536_1	UniRef90_C4GAS6	321.0	0	Putative phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-1372536_1	626523.GCWU000342_01027	321.0	0	Portal protein	N/A
Pfam	UHGV-1372536_1	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1372536_1	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1372536_1	PF04860,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1372536_2	K01358	128.0	1.1e-37	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1372536_2	phrog_94	200.5	0	head maturation protease	head and packaging
UniRef90	UHGV-1372536_2	UniRef90_A0A355BJ21	209.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-1372536_2	1280689.AUJC01000011_gene1520	192.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1372536_2	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1372536_2	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1372536_2	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1372536_3	phrog_10	182.0	0	major head protein	head and packaging
UniRef90	UHGV-1372536_3	UniRef90_UPI00189AE5FE	420.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1372536_3	1280689.AUJC01000011_gene1521	391.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1372536_3	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1372536_3	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1372536_3	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1372536_3	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1372536_4	phrog_5223	44.3	0.0000000000024	neck protein	connector
UniRef90	UHGV-1372536_4	UniRef90_A0A6N8H2B4	54.3	0.000000171	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1372536_4	931626.Awo_c31020	50.8	0.000000655	N/A	N/A
PHROG	UHGV-1372536_5	phrog_1951	75.4	5.7e-22	head-tail adaptor	connector
UniRef90	UHGV-1372536_5	UniRef90_A0A1F8UNT5	65.1	0.0000000000123	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-1372536_5	1094508.Tsac_2422	49.3	0.00000351	Phage head-tail joining protein	N/A
Pfam	UHGV-1372536_5	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-1372536_5	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1372536_5	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1372536_5	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1372536_6	1487921.DP68_11350	58.9	0.000000000787	N/A	N/A
structural_annotation	UHGV-1372536_6	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1372536_7	phrog_5	42.0	0.000000000021	tail completion or Neck1 protein	connector
Pfam	UHGV-1372536_7	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1372536_7	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1372536_8	phrog_88	82.5	5.2e-24	major tail protein	tail
UniRef90	UHGV-1372536_8	UniRef90_S0FUN2	109.0	8.29e-27	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1372536_8	1195236.CTER_5106	109.0	1.39e-27	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1372536_8	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-1372536_8	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1372536_8	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1372536_9	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1372536_10	phrog_13338	120.4	1.5e-35	N/A	unknown function
UniRef90	UHGV-1372536_10	UniRef90_A0A174XMM8	150.0	6.53e-35	Tail tape measure protein TP901 core region	N/A
eggNOG-mapper	UHGV-1372536_10	742740.HMPREF9474_04296	168.0	3.47942e-42	Phage tail tape measure protein TP901	N/A
COG	UHGV-1372536_10	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-1372536_10	TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1372536_11	phrog_37549	46.2	0.000000000000054	virion structural protein	head and packaging
UniRef90	UHGV-1372536_11	UniRef90_A0A3D0W045	216.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-1372536_11	1195236.CTER_5103	108.0	1.1e-21	N/A	N/A
structural_annotation	UHGV-1372536_11	PF02010,PF06848,PF19266,MF_04116,NF033679,NF032891,TIGR01633,TIGR04488,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1372536_12	phrog_26795	84.4	4.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-1372536_12	997296.PB1_16154	128.0	4.51e-31	N/A	N/A
structural_annotation	UHGV-1372536_12	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1372536_13	PF18614,MF_00085,NF003082,COG0361	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1372536_14	PF10651,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-1372536_16	phrog_19111	44.9	0.00000000000084	N/A	unknown function
eggNOG-mapper	UHGV-1372536_16	1232428.CAVO010000002_gene2342	66.2	0.000000000572	ATPase involved in DNA repair	N/A
COG	UHGV-1372536_16	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
UniRef90	UHGV-1372536_17	UniRef90_A0A411ZUM8	208.0	0	Leucine-rich repeat domain-containing protein	N/A
eggNOG-mapper	UHGV-1372536_17	471875.RUMLAC_02240	117.0	8.18e-26	dockerin type I repeat-containing domain protein	N/A
Pfam	UHGV-1372536_17	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
COG	UHGV-1372536_17	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1372536_17	PF13306,NF041351	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1372536_19	411471.SUBVAR_06976	53.9	0.00000032	N/A	N/A
structural_annotation	UHGV-1372536_19	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-1372536_20	phrog_937	49.8	0.000000000000067	hemolysin	other
eggNOG-mapper	UHGV-1372536_20	1519439.JPJG01000023_gene533	70.1	0.0000000000000212	N/A	N/A
PHROG	UHGV-1372536_22	phrog_1454	42.6	0.0000000000094	N/A	unknown function
PHROG	UHGV-1372536_23	phrog_13256	62.8	3.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-1372536_23	1226322.HMPREF1545_00166	73.6	2.33e-16	N/A	N/A
PHROG	UHGV-1372536_24	phrog_14030	128.0	6.3e-38	N/A	unknown function
UniRef90	UHGV-1372536_24	UniRef90_R6LL81	247.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-1372536_24	1121866.AUGK01000003_gene1444	99.0	4.37e-21	amidase activity	N/A
COG	UHGV-1372536_24	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
structural_annotation	UHGV-1372536_25	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1372536_27	1160721.RBI_I00206	53.1	0.000000187	N/A	N/A
PHROG	UHGV-1372536_30	phrog_16490	53.5	0.0000000000000051	N/A	unknown function
eggNOG-mapper	UHGV-1372536_30	641112.ACOK01000103_gene525	55.5	0.000000804	N/A	N/A
structural_annotation	UHGV-1372536_31	PF18573,NF033147	N/A	N/A	N/A	N/A
UniRef90	UHGV-1372536_32	UniRef90_A0A8F0WD75	82.8	5.93e-17	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-1372536_32	1408437.JNJN01000043_gene801	77.0	0.00000000000000176	N/A	N/A
KOfam	UHGV-1372536_33	K06400	372.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1372536_33	phrog_95	363.4	0	integrase	integration and excision
UniRef90	UHGV-1372536_33	UniRef90_UPI0019572FB3	519.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1372536_33	1235835.C814_00825	429.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1372536_33	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1372536_33	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1372536_33	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1372536_33	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1372536_33	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
Pfam	UHGV-1372536_34	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1372536_34	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1372536_35	1121924.ATWH01000011_gene257	98.2	6.68e-20	TM2 domain	N/A
COG	UHGV-1372536_35	COG2314	N/A	N/A	N/A	N/A
KOfam	UHGV-1372536_37	K22300	64.4	2.3e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1372536_37	phrog_8	54.8	0.0000000000000022	transcriptional regulator	transcription regulation
UniRef90	UHGV-1372536_37	UniRef90_E2ZIF0	121.0	7.82e-33	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1372536_37	748224.HMPREF9436_01444	121.0	1.31e-33	N/A	N/A
PADLOC	UHGV-1372536_37	retron_type_VI_hth_cluster2_1	48.4	0.00000000000022	N/A	Retron
Pfam	UHGV-1372536_37	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1372536_37	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1372536_37	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
Pfam	UHGV-1372536_40	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
structural_annotation	UHGV-1372536_40	PF12728,NF040990	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1372536_42	NF041247	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1372536_43	PF05082	N/A	N/A	N/A	N/A
KOfam	UHGV-1372536_45	K00558	156.1	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1372536_45	phrog_363	245.3	0	DNA methyltransferase	other
UniRef90	UHGV-1372536_45	UniRef90_G4KRB8	354.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-1372536_45	693746.OBV_01900	354.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-1372536_45	MTase_II_00058	124.4	1.5e-36	Type II methyltransferase	RM
Pfam	UHGV-1372536_45	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1372536_45	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1372536_45	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1372536_45	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1372536_48	phrog_38832	49.9	0.000000000000013	N/A	unknown function
structural_annotation	UHGV-1372536_48	PF11717,TIGR02450	N/A	N/A	N/A	N/A
PHROG	UHGV-1372536_51	phrog_190	106.9	1.8e-31	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1372536_51	UniRef90_UPI0006C2AC63	121.0	2.44e-32	N/A	N/A
eggNOG-mapper	UHGV-1372536_51	693746.OBV_25250	113.0	4.55e-30	N/A	N/A
Pfam	UHGV-1372536_51	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1372536_51	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-1372536_59	phrog_21498	314.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1372536_59	78346.BRUM_0376	254.0	0	DNA binding	N/A
COG	UHGV-1372536_59	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1372536_59	PF05869,TIGR01712	N/A	N/A	N/A	N/A
PHROG	UHGV-1372536_60	phrog_3584	118.9	3.6e-35	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1372536_60	537013.CLOSTMETH_02141	78.6	0.0000000000000047	N/A	N/A
structural_annotation	UHGV-1372536_60	PF21578,MF_00360	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1372536_61	1007096.BAGW01000031_gene129	77.4	1.63e-16	N/A	N/A
structural_annotation	UHGV-1372536_61	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1372536_62	phrog_119	54.3	0.000000000000002	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1372536_62	UniRef90_A0A174XSZ8	122.0	4.11e-34	Prophage LambdaBa04, GP54	N/A
eggNOG-mapper	UHGV-1372536_62	1235793.C809_01915	122.0	2.59e-34	HNH endonuclease	N/A
Pfam	UHGV-1372536_62	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1372536_62	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1372536_63	phrog_1066	128.3	2.8e-38	N/A	unknown function
eggNOG-mapper	UHGV-1372536_63	1382358.JHVN01000024_gene1703	127.0	2.05e-36	N/A	N/A
structural_annotation	UHGV-1372536_63	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-1372536_64	phrog_9	373.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-1372536_64	UniRef90_A0A1Y3W5R1	779.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1372536_64	1203606.HMPREF1526_00981	726.0	0	Terminase	N/A
Pfam	UHGV-1372536_64	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1372536_64	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1372536_64	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1372536_64	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1372536_65	phrog_12	71.8	7.9e-21	portal protein	head and packaging
UniRef90	UHGV-1372536_65	UniRef90_A0A357T275	197.0	0	Phage portal protein (Fragment)	N/A
eggNOG-mapper	UHGV-1372536_65	1203606.HMPREF1526_00980	200.0	0	Portal protein	N/A
Pfam	UHGV-1372536_65	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1372536_65	COG4695	N/A	N/A	Phage portal protein BeeE	N/A