UHGV-1373078 (vOTU-057132)

Viral Genome: UHGV-1373078

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1373078
vOTU ID	vOTU-057132
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0256187
Associated BioSample	SAMN02334029
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	9
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9801
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	26.51
Jumbo phage	No

Genome content
Genome length (bp)	37,674
GC content	36.10%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	54
CDS density	95%
Average CDS length (bps)	665.22
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1373078_1	phrog_22978	110.2	4.4e-33	N/A	unknown function
eggNOG-mapper	UHGV-1373078_1	1519439.JPJG01000011_gene53	100.0	2.32e-18	N/A	N/A
eggNOG-mapper	UHGV-1373078_2	1410650.JHWL01000003_gene2815	147.0	2.08e-37	N/A	N/A
PHROG	UHGV-1373078_4	phrog_511	150.3	1.54143e-44	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1373078_4	1410650.JHWL01000003_gene2827	209.0	0	N/A	N/A
structural_annotation	UHGV-1373078_4	PF11134,NF038015,TIGR03721,COG3823	N/A	N/A	N/A	N/A
PHROG	UHGV-1373078_5	phrog_12105	108.8	3.3e-32	N/A	unknown function
eggNOG-mapper	UHGV-1373078_5	1226322.HMPREF1545_03850	53.5	0.000000253	N/A	N/A
PHROG	UHGV-1373078_7	phrog_1357	265.9	0	major head protein	head and packaging
UniRef90	UHGV-1373078_7	UniRef90_A0A3D2YEJ7	361.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1373078_7	1410650.JHWL01000003_gene2830	335.0	0	N/A	N/A
Pfam	UHGV-1373078_7	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-1373078_7	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1373078_7	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1373078_8	phrog_13908	235.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1373078_8	1410650.JHWL01000003_gene2831	149.0	6.64e-40	N/A	N/A
KOfam	UHGV-1373078_9	K07584	72.3	8.3e-21	N/A	N/A
PHROG	UHGV-1373078_9	phrog_4478	66.1	3.9e-19	peptidase	other
UniRef90	UHGV-1373078_9	UniRef90_UPI00082F3230	62.4	0.000000000212	ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-1373078_9	1211819.CALK01000005_gene2428	60.5	0.000000000187	Cysteine protease Prp	N/A
Pfam	UHGV-1373078_9	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-1373078_9	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1373078_9	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-1373078_10	phrog_156	326.6	0	portal protein	head and packaging
eggNOG-mapper	UHGV-1373078_10	1410650.JHWL01000003_gene2833	577.0	0	N/A	N/A
structural_annotation	UHGV-1373078_10	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-1373078_11	K06909	138.1	7.80005e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1373078_11	phrog_979	128.4	3.1e-39	terminase large subunit	head and packaging
UniRef90	UHGV-1373078_11	UniRef90_UPI0010311CEE	623.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1373078_11	1410650.JHWL01000003_gene2834	619.0	0	N/A	N/A
Pfam	UHGV-1373078_11	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-1373078_11	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1373078_11	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1373078_20	phrog_1384	109.3	3.5e-32	Mom-like DNA modification protein	other
UniRef90	UHGV-1373078_20	UniRef90_W1I6Y1	144.0	2.37997e-41	Uncultured bacterium extrachromosomal DNA RGI01389	N/A
eggNOG-mapper	UHGV-1373078_20	411490.ANACAC_02385	212.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-1373078_20	PF14236,MF_02210,NF007025,COG1247	N/A	N/A	N/A	N/A
PHROG	UHGV-1373078_23	phrog_424	58.9	9.4e-17	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1373078_23	UniRef90_R6PFX4	214.0	0	Putative phage reductase	N/A
eggNOG-mapper	UHGV-1373078_23	1226322.HMPREF1545_02186	62.4	0.00000000869	Phosphoadenosine phosphosulfate reductase family	N/A
PADLOC	UHGV-1373078_23	SspD_00001	50.5	0.000000000000074	SspD	SSP
COG	UHGV-1373078_23	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1373078_23	PF01507,MF_01161,NF005316,COG1606	N/A	N/A	N/A	N/A
PHROG	UHGV-1373078_28	phrog_24368	45.0	0.0000000000016	N/A	unknown function
PHROG	UHGV-1373078_29	phrog_355	77.5	1.6e-22	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1373078_29	UniRef90_A0A3A8YTX2	79.0	9.46e-17	N/A	N/A
Pfam	UHGV-1373078_29	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-1373078_29	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-1373078_29	PF14359,MF_03036,TIGR03646,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-1373078_30	phrog_17690	111.0	5.8e-33	N/A	unknown function
UniRef90	UHGV-1373078_30	UniRef90_A0A6L5XWF4	119.0	3.69e-32	3-dehydroquinate synthase	N/A
eggNOG-mapper	UHGV-1373078_30	33035.JPJF01000123_gene2433	122.0	4.01e-34	N/A	N/A
PHROG	UHGV-1373078_31	phrog_1891	181.0	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1373078_31	UniRef90_C4ZC58	254.0	0	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-1373078_31	999413.HMPREF1094_00227	133.0	1.06e-35	HNH endonuclease	N/A
Pfam	UHGV-1373078_31	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-1373078_31	PF13392	N/A	N/A	N/A	N/A
PHROG	UHGV-1373078_32	phrog_2044	113.0	9.5e-34	RNA polymerase beta subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1373078_32	UniRef90_K6E3Q5	74.3	7.29e-16	N/A	N/A
eggNOG-mapper	UHGV-1373078_32	1123511.KB905868_gene195	81.6	1.61e-19	N/A	N/A
structural_annotation	UHGV-1373078_32	MF_00337,NF010671,COG1722	N/A	N/A	N/A	N/A
PHROG	UHGV-1373078_34	phrog_7566	93.6	1.2e-27	N/A	unknown function
UniRef90	UHGV-1373078_34	UniRef90_A0A417V5I7	85.1	1.14e-19	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-1373078_34	1304866.K413DRAFT_1198	104.0	3.68e-28	N/A	N/A
KOfam	UHGV-1373078_35	K03469	77.1	3e-22	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-1373078_35	phrog_531	70.1	3.7e-20	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1373078_35	UniRef90_A0A350VVB3	97.8	2.77e-23	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1373078_35	1265502.KB905935_gene3091	73.6	0.0000000000000111	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-1373078_35	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-1373078_35	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-1373078_35	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-1373078_36	phrog_3584	148.4	4.2039e-44	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1373078_36	1235800.C819_02258	238.0	0	N/A	N/A
structural_annotation	UHGV-1373078_36	PF21578,NF041486	N/A	N/A	N/A	N/A
KOfam	UHGV-1373078_38	K08309	58.3	1.6e-16	slt; soluble lytic murein transglycosylase [EC:4.2.2.-]	N/A
PHROG	UHGV-1373078_38	phrog_32437	76.2	4.6e-22	N/A	unknown function
UniRef90	UHGV-1373078_38	UniRef90_A0A350VVB0	97.1	1.99e-21	SLT domain-containing protein	N/A
eggNOG-mapper	UHGV-1373078_38	1009370.ALO_14087	59.3	0.0000000308	transglycosylase	N/A
Pfam	UHGV-1373078_38	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
COG	UHGV-1373078_38	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
KOfam	UHGV-1373078_41	K18830	40.4	0.000000000055	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
UniRef90	UHGV-1373078_41	UniRef90_A0A6L8T004	125.0	7.27e-35	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1373078_41	1235790.C805_00012	115.0	7.65e-32	Helix-turn-helix domain	N/A
Pfam	UHGV-1373078_41	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1373078_41	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1373078_41	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1373078_42	K06400	370.0	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1373078_42	phrog_95	362.1	0	integrase	integration and excision
UniRef90	UHGV-1373078_42	UniRef90_A0A350VV94	416.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-1373078_42	742765.HMPREF9457_02089	332.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1373078_42	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1373078_42	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1373078_42	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1373078_42	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1373078_42	PF00239,PF07508,PF13408,NF041201,COG1961	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1373078_43	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-1373078_45	phrog_16490	86.1	2.2e-25	N/A	unknown function
eggNOG-mapper	UHGV-1373078_45	476272.RUMHYD_01770	103.0	2.4e-24	N/A	N/A
PHROG	UHGV-1373078_46	phrog_22984	45.6	0.0000000000012	N/A	unknown function
PHROG	UHGV-1373078_47	phrog_21718	89.5	3.8e-26	N/A	unknown function
UniRef90	UHGV-1373078_47	UniRef90_A0A8D9PDT7	54.3	0.000000327	Membrane fusogenic activity protein	N/A
eggNOG-mapper	UHGV-1373078_47	397290.C810_05210	88.2	2.72e-20	N/A	N/A
PHROG	UHGV-1373078_48	phrog_3754	84.6	1.1e-24	N/A	unknown function
eggNOG-mapper	UHGV-1373078_48	476272.RUMHYD_01764	154.0	0	N/A	N/A
structural_annotation	UHGV-1373078_49	PF01047,MF_00620,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-1373078_51	K19304	86.0	5.1e-25	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-1373078_51	phrog_14988	71.1	1.8e-20	peptidase	other
UniRef90	UHGV-1373078_51	UniRef90_A0A350RPP3	154.0	5.10073e-43	SPOR domain-containing protein	N/A
eggNOG-mapper	UHGV-1373078_51	511680.BUTYVIB_00396	154.0	4.34403e-44	peptidase	N/A
Pfam	UHGV-1373078_51	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
COG	UHGV-1373078_51	COG4942	N/A	N/A	Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB	N/A
PHROG	UHGV-1373078_52	phrog_881	62.3	5.6e-18	holin	lysis
UniRef90	UHGV-1373078_52	UniRef90_UPI000C83DA00	62.4	0.0000000000245	holin	N/A
eggNOG-mapper	UHGV-1373078_52	1437610.BREU_1365	52.4	0.0000000844	Putative phage holin Dp-1	N/A
Pfam	UHGV-1373078_52	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-1373078_52	PF16938	N/A	N/A	N/A	N/A
Pfam	UHGV-1373078_53	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
PHROG	UHGV-1373078_54	phrog_22978	689.8	0	N/A	unknown function
UniRef90	UHGV-1373078_54	UniRef90_A0A396QCY9	534.0	0	MuF_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1373078_54	1410650.JHWL01000003_gene2814	451.0	0	N/A	N/A