UHGV-1373181 (vOTU-002733)

Viral Genome: UHGV-1373181

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1373181
vOTU ID	vOTU-002733
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0282093
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	25
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9782
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	45.75
Jumbo phage	No

Genome content
Genome length (bp)	42,560
GC content	42.99%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	52
CDS density	90%
Average CDS length (bps)	738.17
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1373181_4	phrog_3584	152.2	2.8026e-45	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1373181_4	UniRef90_UPI001D0EB55A	305.0	0	helitron helicase-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1373181_4	483218.BACPEC_01173	171.0	0	N/A	N/A
structural_annotation	UHGV-1373181_4	PF21578,NF041486	N/A	N/A	N/A	N/A
UniRef90	UHGV-1373181_5	UniRef90_A0A3S5AUR2	279.0	0	Ribonuclease H	N/A
eggNOG-mapper	UHGV-1373181_5	411461.DORFOR_01140	99.0	3.28e-24	RNA-DNA hybrid ribonuclease activity	N/A
COG	UHGV-1373181_5	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-1373181_5	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1373181_6	411459.RUMOBE_00951	210.0	0	N/A	N/A
PHROG	UHGV-1373181_7	phrog_8470	327.3	0	N/A	unknown function
UniRef90	UHGV-1373181_7	UniRef90_UPI001D086F83	514.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-1373181_7	1235792.C808_00066	536.0	0	PcfJ-like protein	N/A
Pfam	UHGV-1373181_7	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-1373181_7	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-1373181_8	phrog_15077	100.1	4.1e-29	N/A	unknown function
UniRef90	UHGV-1373181_8	UniRef90_A5ZPN2	329.0	0	N/A	N/A
eggNOG-mapper	UHGV-1373181_8	411459.RUMOBE_00949	329.0	0	N/A	N/A
COG	UHGV-1373181_8	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1373181_8	PF11300,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-1373181_12	phrog_6568	58.9	7.1e-17	N/A	unknown function
KOfam	UHGV-1373181_14	K04087	82.4	4.4e-24	hflC; modulator of FtsH protease HflC	N/A
PHROG	UHGV-1373181_14	phrog_200	148.2	0	lipoprotein	other
UniRef90	UHGV-1373181_14	UniRef90_A0A416QWZ0	449.0	0	Prohibitin family protein	N/A
eggNOG-mapper	UHGV-1373181_14	537007.BLAHAN_05484	312.0	0	prohibitin homologues	N/A
Pfam	UHGV-1373181_14	PF01145	N/A	N/A	SPFH domain / Band 7 family	Band_7
COG	UHGV-1373181_14	COG0330	N/A	N/A	Regulator of protease activity HflC, stomatin/prohibitin superfamily	N/A
structural_annotation	UHGV-1373181_14	PF01145,MF_01562,NF008181,COG0330	N/A	N/A	N/A	N/A
PHROG	UHGV-1373181_15	phrog_36	80.6	2.2e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-1373181_15	UniRef90_A0A1C5VKJ4	257.0	0	RNA polymerase sigma factor, sigma-70 family	N/A
eggNOG-mapper	UHGV-1373181_15	1235792.C808_03069	108.0	1.9e-28	sigma factor activity	N/A
Pfam	UHGV-1373181_15	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
COG	UHGV-1373181_15	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1373181_15	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1373181_16	553219.CAMSH0001_1671	169.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-1373181_16	PF09254,MF_00278,TIGR03800,COG1787,COG0311	N/A	N/A	N/A	N/A
PHROG	UHGV-1373181_17	phrog_1889	213.0	0	terminase small subunit	head and packaging
UniRef90	UHGV-1373181_17	UniRef90_A0A564VY60	464.0	0	ATPase subunit of terminase (GpP-like)	N/A
eggNOG-mapper	UHGV-1373181_17	33035.JPJF01000107_gene435	248.0	0	N/A	N/A
Pfam	UHGV-1373181_17	PF06056	N/A	N/A	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
NCBIFam	UHGV-1373181_17	NF040601.1	N/A	N/A	phage terminase small subunit	N/A
COG	UHGV-1373181_17	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1373181_17	PF06056,NF040601,COG5484	N/A	N/A	N/A	N/A
KOfam	UHGV-1373181_18	K06909	130.2	2e-38	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1373181_18	phrog_10250	208.0	0	N/A	unknown function
UniRef90	UHGV-1373181_18	UniRef90_A0A1G5F2L0	1097.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-1373181_18	903814.ELI_3215	630.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1373181_18	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-1373181_18	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1373181_18	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1373181_18	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1373181_20	phrog_15471	129.1	1.5e-39	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1373181_20	UniRef90_A0A1G5F2B5	418.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1373181_20	1141106.CAIB01000133_gene1117	178.0	0	HNH endonuclease	N/A
Pfam	UHGV-1373181_20	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-1373181_20	PF13392,PF10013,COG4068	N/A	N/A	N/A	N/A
PHROG	UHGV-1373181_21	phrog_64	399.1	0	portal protein	head and packaging
UniRef90	UHGV-1373181_21	UniRef90_A0A1G5F2B6	935.0	0	Phage portal protein, SPP1 family	N/A
eggNOG-mapper	UHGV-1373181_21	742733.HMPREF9469_01826	599.0	0	Phage portal protein, SPP1 family	N/A
Pfam	UHGV-1373181_21	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1373181_21	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1373181_21	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1373181_22	phrog_2841	328.4	0	minor head protein	head and packaging
UniRef90	UHGV-1373181_22	UniRef90_A0A1C5VLG6	1019.0	0	NAD(+)--arginine ADP-ribosyltransferase EFV	N/A
eggNOG-mapper	UHGV-1373181_22	1235800.C819_00488	354.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-1373181_22	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1373181_22	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1373181_22	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1373181_22	PF21814,PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1373181_24	phrog_355	60.8	2.4e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1373181_24	UniRef90_UPI001648737F	191.0	0	N/A	N/A
eggNOG-mapper	UHGV-1373181_24	1256908.HMPREF0373_00479	147.0	5.60519e-45	N/A	N/A
Pfam	UHGV-1373181_24	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-1373181_24	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-1373181_25	phrog_918	131.0	2.7e-39	N/A	unknown function
UniRef90	UHGV-1373181_25	UniRef90_UPI00115A7D93	135.0	6.03e-40	N/A	N/A
eggNOG-mapper	UHGV-1373181_25	632112.C1KFI4_9CAUD	128.0	3.77e-37	N/A	N/A
Pfam	UHGV-1373181_25	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1373181_25	PF19791	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1373181_26	PF01281	N/A	N/A	N/A	N/A
PHROG	UHGV-1373181_27	phrog_172	162.7	0	head scaffolding protein	head and packaging
UniRef90	UHGV-1373181_27	UniRef90_A0A415FLT0	341.0	0	N/A	N/A
eggNOG-mapper	UHGV-1373181_27	742733.HMPREF9469_01824	218.0	0	N/A	N/A
Pfam	UHGV-1373181_27	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1373181_27	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1373181_28	phrog_422	294.8	0	major head protein	head and packaging
UniRef90	UHGV-1373181_28	UniRef90_A0A2H4JCM6	493.0	0	Putative capsid protein	N/A
eggNOG-mapper	UHGV-1373181_28	742733.HMPREF9469_01823	508.0	0	N/A	N/A
structural_annotation	UHGV-1373181_28	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1373181_29	phrog_2724	63.0	5.5e-18	N/A	unknown function
UniRef90	UHGV-1373181_29	UniRef90_A0A564VY53	146.0	1.68156e-44	Rho_N domain-containing protein	N/A
Pfam	UHGV-1373181_29	PF07498	N/A	N/A	Rho termination factor, N-terminal domain	Rho_N
COG	UHGV-1373181_29	COG0261	N/A	N/A	Ribosomal protein L21	N/A
structural_annotation	UHGV-1373181_29	PF07498	N/A	N/A	N/A	N/A
PHROG	UHGV-1373181_30	phrog_132	89.4	2.7e-26	head-tail adaptor	connector
UniRef90	UHGV-1373181_30	UniRef90_A0A1G5F1K3	183.0	0	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-1373181_30	742733.HMPREF9469_01821	158.0	0	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1373181_30	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1373181_30	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-1373181_31	phrog_2168	103.1	1.3e-30	N/A	unknown function
eggNOG-mapper	UHGV-1373181_31	742733.HMPREF9469_01820	125.0	1.55e-35	N/A	N/A
structural_annotation	UHGV-1373181_31	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1373181_32	phrog_5	71.9	1.3e-20	tail completion or Neck1 protein	connector
UniRef90	UHGV-1373181_32	UniRef90_A0A1G5F1L8	343.0	0	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-1373181_32	742733.HMPREF9469_01819	168.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
structural_annotation	UHGV-1373181_32	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1373181_33	1235800.C819_00480	145.0	1.58347e-43	N/A	N/A
structural_annotation	UHGV-1373181_33	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1373181_34	phrog_158	52.5	0.000000000000011	major tail protein	tail
UniRef90	UHGV-1373181_34	UniRef90_A0A415FLM9	270.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1373181_34	742733.HMPREF9469_01817	172.0	0	Phage tail tube protein, TTP	N/A
structural_annotation	UHGV-1373181_34	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-1373181_35	UniRef90_UPI001EE8B5C4	154.0	1.4013e-45	N/A	N/A
eggNOG-mapper	UHGV-1373181_35	1235800.C819_00478	104.0	1.97e-26	N/A	N/A
Pfam	UHGV-1373181_35	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-1373181_35	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-1373181_36	phrog_2066	75.8	5.6e-22	N/A	unknown function
eggNOG-mapper	UHGV-1373181_36	1123304.AQYA01000037_gene232	63.9	0.0000000000199	N/A	N/A
PHROG	UHGV-1373181_37	phrog_1535	259.3	0	tail length tape measure protein	tail
UniRef90	UHGV-1373181_37	UniRef90_A0A448W7L1	1211.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1373181_37	1232453.BAIF02000058_gene1637	196.0	0	phage tail tape measure protein	N/A
COG	UHGV-1373181_37	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1373181_38	phrog_1194	96.0	2.8e-28	N/A	unknown function
UniRef90	UHGV-1373181_38	UniRef90_R5Z572	65.5	0.00000000000975	Putative phage protein	N/A
eggNOG-mapper	UHGV-1373181_38	1232453.BAIF02000058_gene1638	161.0	0	N/A	N/A
structural_annotation	UHGV-1373181_38	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1373181_39	phrog_2566	69.6	3.6e-20	N/A	unknown function
eggNOG-mapper	UHGV-1373181_39	1294142.CINTURNW_1040	53.1	0.0000000386	N/A	N/A
PHROG	UHGV-1373181_40	phrog_1401	79.9	2.9e-23	N/A	unknown function
UniRef90	UHGV-1373181_40	UniRef90_A0A7C6P910	75.9	0.00000000000000381	N/A	N/A
eggNOG-mapper	UHGV-1373181_40	1232453.BAIF02000058_gene1640	93.2	7.88e-23	N/A	N/A
structural_annotation	UHGV-1373181_40	PF07761	N/A	N/A	N/A	N/A
KOfam	UHGV-1373181_41	K16628	79.6	1.5e-23	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-1373181_41	phrog_6616	129.3	2.7e-38	tail protein	tail
UniRef90	UHGV-1373181_41	UniRef90_A0A1G5F0W6	2159.0	0	Collagen triple helix repeat-containing protein	N/A
eggNOG-mapper	UHGV-1373181_41	1232453.BAIF02000058_gene1641	354.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1373181_41	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1373181_41	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1373181_41	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1373181_42	PF07041	N/A	N/A	N/A	N/A
PHROG	UHGV-1373181_43	phrog_4105	86.4	2.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-1373181_43	411459.RUMOBE_00911	176.0	0	N/A	N/A
PHROG	UHGV-1373181_44	phrog_18218	138.0	2.50006e-41	N/A	unknown function
UniRef90	UHGV-1373181_44	UniRef90_A0A352BLY3	195.0	0	Ribonuclease	N/A
eggNOG-mapper	UHGV-1373181_44	411459.RUMOBE_00910	165.0	0	N/A	N/A
structural_annotation	UHGV-1373181_44	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-1373181_45	K01447	111.9	8.5e-33	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1373181_45	phrog_670	164.6	0	endolysin	lysis
UniRef90	UHGV-1373181_45	UniRef90_A0A416QWS5	890.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-1373181_45	411459.RUMOBE_00909	374.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-1373181_45	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
Pfam	UHGV-1373181_45	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1373181_45	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1373181_45	PF01832,NF008758,NF009354,COG5632,COG4193	N/A	N/A	N/A	N/A
KOfam	UHGV-1373181_46	K06400	288.2	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1373181_46	phrog_95	319.3	0	integrase	integration and excision
UniRef90	UHGV-1373181_46	UniRef90_A0A415FHQ5	1000.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-1373181_46	33035.JPJF01000109_gene439	642.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1373181_46	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1373181_46	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1373181_46	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1373181_46	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1373181_46	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-1373181_47	phrog_87	79.4	3.8e-23	metallo-protease	other
UniRef90	UHGV-1373181_47	UniRef90_F7JQG6	200.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-1373181_47	1256908.HMPREF0373_00642	205.0	0	Zn peptidase	N/A
COG	UHGV-1373181_47	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1373181_47	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-1373181_48	phrog_2158	156.5	0	abortive infection resistance protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1373181_48	UniRef90_A0A415L598	674.0	0	Abi family protein	N/A
eggNOG-mapper	UHGV-1373181_48	626523.GCWU000342_01051	270.0	0	Abi-like protein	N/A
PADLOC	UHGV-1373181_48	AbiD	120.9	2.3e-35	AbiD	Abi
Pfam	UHGV-1373181_48	PF07751	N/A	N/A	Abi-like protein	Abi_2
COG	UHGV-1373181_48	COG4823	N/A	N/A	Abortive infection bacteriophage resistance protein	N/A
structural_annotation	UHGV-1373181_48	PF07751,COG4823	N/A	N/A	N/A	N/A
UniRef90	UHGV-1373181_49	UniRef90_A0A564VJX0	197.0	0	Helix-turn-helix domain protein	N/A
eggNOG-mapper	UHGV-1373181_49	1235798.C817_04757	58.9	0.00000000227	N/A	N/A
COG	UHGV-1373181_49	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
UniRef90	UHGV-1373181_50	UniRef90_A0A173UP67	123.0	2.18e-34	Helix-turn-helix domain	N/A
eggNOG-mapper	UHGV-1373181_50	1235798.C817_04757	94.7	2.74e-23	N/A	N/A
COG	UHGV-1373181_50	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
UniRef90	UHGV-1373181_51	UniRef90_A0A414UVS4	83.2	1.55e-19	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1373181_51	97139.C824_00059	87.4	5.76e-22	N/A	N/A
structural_annotation	UHGV-1373181_51	PF13443,NF010465,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1373181_52	phrog_585	91.6	8.3e-27	N/A	unknown function
UniRef90	UHGV-1373181_52	UniRef90_A0A415FLQ9	246.0	0	N/A	N/A
eggNOG-mapper	UHGV-1373181_52	97138.C820_00628	88.6	7.12e-21	N/A	N/A
Pfam	UHGV-1373181_52	PF10711	N/A	N/A	N/A	DUF2513
structural_annotation	UHGV-1373181_52	PF10711,MF_01819,TIGR03433,COG3432	N/A	N/A	N/A	N/A