UHGV-1373793 (vOTU-057275)

Viral Genome: UHGV-1373793

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1373793
vOTU ID	vOTU-057275
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0293617
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9812
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	44.46
Jumbo phage	No

Genome content
Genome length (bp)	44,977
GC content	40.58%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	72
CDS density	91%
Average CDS length (bps)	569.08
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1373793_1	476272.RUMHYD_01742	68.6	0.00000000000224	N/A	N/A
COG	UHGV-1373793_1	COG5519	N/A	N/A	N/A	N/A
UniRef90	UHGV-1373793_3	UniRef90_A0A6L8SWV5	170.0	0	Winged helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-1373793_3	PF13412	N/A	N/A	Winged helix-turn-helix DNA-binding	HTH_24
COG	UHGV-1373793_3	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1373793_3	PF01726,COG0640	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1373793_4	PF04936	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1373793_7	NF041070	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1373793_8	NF041197	N/A	N/A	N/A	N/A
PHROG	UHGV-1373793_9	phrog_4601	52.7	0.0000000000000074	N/A	unknown function
structural_annotation	UHGV-1373793_9	PF17888	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1373793_10	476272.RUMHYD_01751	50.4	0.00000111	N/A	N/A
AcrCatalog	UHGV-1373793_10	cluster_11670	40.8	0.000000227	NA	N/A
PHROG	UHGV-1373793_12	phrog_20593	54.6	0.0000000000000019	N/A	unknown function
eggNOG-mapper	UHGV-1373793_15	1235799.C818_02666	70.1	0.00000000000555	N/A	N/A
structural_annotation	UHGV-1373793_15	PF11302	N/A	N/A	N/A	N/A
PHROG	UHGV-1373793_16	phrog_2776	78.6	4.1e-23	N/A	unknown function
eggNOG-mapper	UHGV-1373793_16	1298920.KI911353_gene2703	183.0	0	N/A	N/A
structural_annotation	UHGV-1373793_16	PF06319,NF033832,COG5321	N/A	N/A	N/A	N/A
KOfam	UHGV-1373793_19	K06909	417.1	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1373793_19	phrog_3717	167.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-1373793_19	UniRef90_A0A412EKJ9	952.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1373793_19	33035.JPJF01000106_gene3136	674.0	0	Terminase small subunit	N/A
Pfam	UHGV-1373793_19	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
Pfam	UHGV-1373793_19	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1373793_19	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1373793_19	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1373793_19	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1373793_19	PF04466,PF17288,PF03592,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1373793_21	phrog_533	276.1	0	portal protein	head and packaging
UniRef90	UHGV-1373793_21	UniRef90_A0A1C6CDM8	704.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-1373793_21	33035.JPJF01000106_gene3135	539.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-1373793_21	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-1373793_23	UniRef90_UPI0018C7F188	122.0	3.45e-26	SGNH/GDSL hydrolase family protein	N/A
eggNOG-mapper	UHGV-1373793_23	761193.Runsl_0319	112.0	2.79e-23	N/A	N/A
structural_annotation	UHGV-1373793_23	PF14606,NF007819,COG2755	N/A	N/A	N/A	N/A
PHROG	UHGV-1373793_25	phrog_581	270.3	0	minor head protein	head and packaging
UniRef90	UHGV-1373793_25	UniRef90_A0A395X791	762.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1373793_25	33035.JPJF01000106_gene3134	425.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1373793_25	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1373793_25	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1373793_25	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1373793_26	phrog_3754	115.5	3.7e-34	N/A	unknown function
eggNOG-mapper	UHGV-1373793_26	476272.RUMHYD_01764	174.0	0	N/A	N/A
UniRef90	UHGV-1373793_27	UniRef90_A0A395X7A4	178.0	0	CTP synthase	N/A
eggNOG-mapper	UHGV-1373793_27	476272.RUMHYD_01766	120.0	3.06e-34	N/A	N/A
PHROG	UHGV-1373793_29	phrog_31631	67.1	1.7e-19	N/A	unknown function
PHROG	UHGV-1373793_30	phrog_21718	133.0	1.3e-39	N/A	unknown function
eggNOG-mapper	UHGV-1373793_30	476272.RUMHYD_01768	129.0	4.55e-36	N/A	N/A
PHROG	UHGV-1373793_31	phrog_22984	94.3	7.8e-28	N/A	unknown function
PHROG	UHGV-1373793_32	phrog_16490	188.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1373793_32	397290.C810_01328	193.0	0	N/A	N/A
PHROG	UHGV-1373793_33	phrog_20016	207.5	0	N/A	unknown function
UniRef90	UHGV-1373793_33	UniRef90_A0A285PT46	170.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1373793_33	397290.C810_05214	187.0	0	N/A	N/A
structural_annotation	UHGV-1373793_33	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1373793_34	phrog_28802	223.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1373793_34	476272.RUMHYD_01772	198.0	0	N/A	N/A
PHROG	UHGV-1373793_35	phrog_194	66.0	7.9e-19	head scaffolding protein	head and packaging
UniRef90	UHGV-1373793_35	UniRef90_UPI001D14C9C8	184.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1373793_35	476272.RUMHYD_01775	199.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-1373793_35	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-1373793_36	phrog_544	169.7	0	major head protein	head and packaging
UniRef90	UHGV-1373793_36	UniRef90_A0A395X7A1	725.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1373793_36	1232453.BAIF02000011_gene3359	388.0	0	N/A	N/A
Pfam	UHGV-1373793_36	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-1373793_36	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1373793_37	phrog_541	76.1	9.8e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-1373793_37	476272.RUMHYD_01778	97.4	7.65e-23	N/A	N/A
PHROG	UHGV-1373793_40	phrog_1129	75.8	3.9e-22	holin	lysis
UniRef90	UHGV-1373793_40	UniRef90_A0A395X7B2	174.0	0	Enolase	N/A
eggNOG-mapper	UHGV-1373793_40	411461.DORFOR_00721	113.0	1.02e-31	N/A	N/A
Pfam	UHGV-1373793_40	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1373793_40	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1373793_41	phrog_3366	91.9	6.5e-27	N/A	unknown function
eggNOG-mapper	UHGV-1373793_41	476272.RUMHYD_01779	154.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-1373793_41	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1373793_42	phrog_556	61.5	1.1e-17	minor head protein	head and packaging
UniRef90	UHGV-1373793_42	UniRef90_UPI000E4989EB	298.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1373793_42	476272.RUMHYD_01780	163.0	0	N/A	N/A
Pfam	UHGV-1373793_42	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1373793_42	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1373793_43	phrog_3266	92.0	5.2e-27	tail completion	connector
eggNOG-mapper	UHGV-1373793_43	476272.RUMHYD_01781	152.0	1.12104e-44	N/A	N/A
structural_annotation	UHGV-1373793_43	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1373793_44	phrog_3099	132.6	2.6e-39	N/A	unknown function
eggNOG-mapper	UHGV-1373793_44	411902.CLOBOL_00129	169.0	0	N/A	N/A
structural_annotation	UHGV-1373793_44	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1373793_45	phrog_11299	64.1	2.7e-18	N/A	unknown function
eggNOG-mapper	UHGV-1373793_45	411459.RUMOBE_01382	57.8	0.0000000115	N/A	N/A
structural_annotation	UHGV-1373793_45	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1373793_46	phrog_706	134.7	6.3e-40	N/A	unknown function
UniRef90	UHGV-1373793_46	UniRef90_UPI001BAD00AD	212.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1373793_46	411459.RUMOBE_01383	349.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1373793_46	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1373793_46	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1373793_47	phrog_1535	429.8	0	tail length tape measure protein	tail
UniRef90	UHGV-1373793_47	UniRef90_A0A173R880	502.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1373793_47	476272.RUMHYD_01785	489.0	0	phage tail tape measure protein	N/A
COG	UHGV-1373793_47	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1373793_47	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1373793_48	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1373793_49	phrog_6616	470.9	0	tail protein	tail
UniRef90	UHGV-1373793_49	UniRef90_A0A395X7B3	726.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1373793_49	33035.JPJF01000043_gene1002	243.0	0	N/A	N/A
Pfam	UHGV-1373793_49	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-1373793_49	PF05113,PF18432,NF033848,NF011735,COG4379	N/A	N/A	N/A	N/A
KOfam	UHGV-1373793_50	K07273	196.4	0	acm; lysozyme	N/A
PHROG	UHGV-1373793_50	phrog_6745	198.5	0	endolysin	lysis
UniRef90	UHGV-1373793_50	UniRef90_A0A173ZZ10	784.0	0	Lysozyme M1	N/A
eggNOG-mapper	UHGV-1373793_50	457412.RSAG_00790	789.0	0	CHAP domain	N/A
Pfam	UHGV-1373793_50	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-1373793_50	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-1373793_50	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1373793_50	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-1373793_50	PF01183,TIGR02594,TIGR04303,COG3757,COG3942	N/A	N/A	N/A	N/A
KOfam	UHGV-1373793_51	K14059	92.6	6.3e-27	int; integrase	N/A
PHROG	UHGV-1373793_51	phrog_1	122.1	6.1e-36	integrase	integration and excision
UniRef90	UHGV-1373793_51	UniRef90_A0A6L8SXX0	606.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1373793_51	1235792.C808_05256	359.0	0	Belongs to the 'phage' integrase family	N/A
COG	UHGV-1373793_51	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1373793_51	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-1373793_52	K07448	130.8	1.2e-38	mrr; restriction system protein	N/A
PHROG	UHGV-1373793_52	phrog_19856	42.0	0.0000000000072	N/A	unknown function
UniRef90	UHGV-1373793_52	UniRef90_A0A416IWX8	230.0	0	Restriction endonuclease	N/A
eggNOG-mapper	UHGV-1373793_52	1235790.C805_00010	152.0	5.0727e-43	Restriction endonuclease	N/A
PADLOC	UHGV-1373793_52	ZorD1_00005	62.5	6.1e-18	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-1373793_52	PF04471	N/A	N/A	Restriction endonuclease	Mrr_cat
COG	UHGV-1373793_52	COG1787	N/A	N/A	Endonuclease, HJR/Mrr/RecB family	N/A
structural_annotation	UHGV-1373793_52	PF04471,NF002876,COG1787	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1373793_53	PF02701	N/A	N/A	N/A	N/A
UniRef90	UHGV-1373793_54	UniRef90_UPI00156FE623	218.0	0	N/A	N/A
eggNOG-mapper	UHGV-1373793_54	1122917.KB899663_gene2489	72.4	0.000000000000396	N/A	N/A
KOfam	UHGV-1373793_56	K18830	48.0	0.00000000000021	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1373793_56	phrog_4	43.6	0.0000000000067	transcriptional repressor	transcription regulation
UniRef90	UHGV-1373793_56	UniRef90_A0A2V2D6D5	159.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1373793_56	1235790.C805_00012	103.0	4.31e-27	Helix-turn-helix domain	N/A
Pfam	UHGV-1373793_56	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1373793_56	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1373793_56	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1373793_61	phrog_6058	52.9	0.0000000000000037	N/A	unknown function
UniRef90	UHGV-1373793_61	UniRef90_A0A2V1JQ38	66.6	0.00000000000278	Glycogen synthase	N/A
eggNOG-mapper	UHGV-1373793_61	742733.HMPREF9469_05094	62.0	0.0000000000302	N/A	N/A
AcrCatalog	UHGV-1373793_62	cluster_17974	59.7	0.00000000000000134	NA	N/A
structural_annotation	UHGV-1373793_65	NF001645	N/A	N/A	N/A	N/A
UniRef90	UHGV-1373793_66	UniRef90_R6RDX0	79.0	5.26e-18	Arginyl-tRNA synthetase	N/A
PHROG	UHGV-1373793_67	phrog_2872	245.1	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1373793_67	UniRef90_UPI0015715A02	378.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1373793_67	1256908.HMPREF0373_00658	342.0	0	AAA domain	N/A
Pfam	UHGV-1373793_67	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-1373793_67	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-1373793_68	phrog_18107	267.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1373793_68	397290.C810_05167	249.0	0	N/A	N/A
structural_annotation	UHGV-1373793_68	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-1373793_69	phrog_314	84.6	6e-25	homing endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1373793_69	UniRef90_A0A8D9UHJ5	88.6	9.34e-17	Intron associated endonuclease	N/A
eggNOG-mapper	UHGV-1373793_69	476272.RUMHYD_01755	87.4	1.46e-17	GIY-YIG type nucleases (URI domain)	N/A
Pfam	UHGV-1373793_69	PF01541	N/A	N/A	GIY-YIG catalytic domain	GIY-YIG
Pfam	UHGV-1373793_69	PF07460	N/A	N/A	NUMOD3 motif	NUMOD3
NCBIFam	UHGV-1373793_69	TIGR01453.1	N/A	N/A	group I intron endonuclease	N/A
COG	UHGV-1373793_69	COG3860	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1373793_69	PF19835,PF07453,TIGR01453,COG2827	N/A	N/A	N/A	N/A
PHROG	UHGV-1373793_70	phrog_3490	145.5	2.39622e-43	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1373793_70	UniRef90_UPI00156FB923	194.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1373793_70	1256908.HMPREF0373_00660	193.0	0	N/A	N/A
Pfam	UHGV-1373793_70	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-1373793_70	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
KOfam	UHGV-1373793_71	K02316	68.5	1e-19	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-1373793_71	phrog_11992	159.1	0	N/A	unknown function
UniRef90	UHGV-1373793_71	UniRef90_A0A395X7I4	299.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-1373793_71	476272.RUMHYD_01741	179.0	0	CHC2 zinc finger	N/A
PADLOC	UHGV-1373793_71	drt-UG29	57.1	1.9e-16	DRT	DRT
Pfam	UHGV-1373793_71	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-1373793_71	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-1373793_71	PF01807,PF00401	N/A	N/A	N/A	N/A
PHROG	UHGV-1373793_72	phrog_8841	529.0	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1373793_72	UniRef90_A0A412EL97	1060.0	0	N/A	N/A
eggNOG-mapper	UHGV-1373793_72	476272.RUMHYD_01742	714.0	0	N/A	N/A
Pfam	UHGV-1373793_72	PF06048	N/A	N/A	N/A	DUF927
COG	UHGV-1373793_72	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1373793_72	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A