UHGV-1375313 (vOTU-057623)

Viral Genome: UHGV-1375313

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1375313
vOTU ID	vOTU-057623
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0295673
Associated BioSample	SAMEA4545388
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9795
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	28.25
Jumbo phage	No

Genome content
Genome length (bp)	45,490
GC content	46.02%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	73
CDS density	88%
Average CDS length (bps)	545.51
Total tRNA genes	2
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1375313_3	K01520	126.3	2.9e-37	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1375313_3	phrog_135	116.0	2.7e-34	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1375313_3	UniRef90_A0A6A2VG41	167.0	0	Deoxyuridine 5'-triphosphate nucleotidohydrolase	N/A
eggNOG-mapper	UHGV-1375313_3	1282887.AUJG01000016_gene1113	143.0	4.11996e-41	N/A	N/A
Pfam	UHGV-1375313_3	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-1375313_3	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-1375313_3	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1375313_3	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-1375313_4	phrog_236	53.3	0.0000000000000079	nucleotide kinase	other
UniRef90	UHGV-1375313_4	UniRef90_UPI001121EA63	56.2	0.000000614	N/A	N/A
eggNOG-mapper	UHGV-1375313_4	753084.F4YCQ0_9CAUD	65.1	0.0000000000534	N/A	N/A
KOfam	UHGV-1375313_5	K03465	189.7	0	thyX, thy1; thymidylate synthase (FAD) [EC:2.1.1.148]	N/A
PHROG	UHGV-1375313_5	phrog_85	130.6	6.9e-39	thymidylate synthase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1375313_5	UniRef90_A0A2A7ALC5	241.0	0	Flavin-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-1375313_5	657322.FPR_23400	219.0	0	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant	N/A
Pfam	UHGV-1375313_5	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
NCBIFam	UHGV-1375313_5	TIGR02170.1	N/A	N/A	FAD-dependent thymidylate synthase	N/A
COG	UHGV-1375313_5	COG1351	N/A	N/A	Thymidylate synthase ThyX, FAD-dependent family	N/A
HAMAP	UHGV-1375313_5	MF_01408	N/A	N/A	Flavin-dependent thymidylate synthase [thyX]	N/A
structural_annotation	UHGV-1375313_5	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1375313_10	PF21662,MF_00683,NF010673	N/A	N/A	N/A	N/A
PHROG	UHGV-1375313_12	phrog_1909	122.0	3.9e-36	N/A	unknown function
structural_annotation	UHGV-1375313_12	TIGR01651,COG4547	N/A	N/A	N/A	N/A
KOfam	UHGV-1375313_13	K09882	113.5	2.3e-33	cobS; cobaltochelatase CobS [EC:6.6.1.2]	N/A
PHROG	UHGV-1375313_13	phrog_249	167.8	0	porphyrin biosynthesis	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1375313_13	UniRef90_UPI001373859D	268.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1375313_13	402612.FP2177	186.0	0	AAA domain (dynein-related subfamily)	N/A
Pfam	UHGV-1375313_13	PF07728	N/A	N/A	AAA domain (dynein-related subfamily)	AAA_5
COG	UHGV-1375313_13	COG0714	N/A	N/A	MoxR-like ATPase	N/A
structural_annotation	UHGV-1375313_13	PF07728,MF_03121,TIGR02640,COG0714	N/A	N/A	N/A	N/A
Pfam	UHGV-1375313_16	PF13412	N/A	N/A	Winged helix-turn-helix DNA-binding	HTH_24
PHROG	UHGV-1375313_17	phrog_244	73.4	3.7e-21	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1375313_17	UniRef90_A0A841R0Q1	101.0	2.46e-25	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-1375313_17	1410650.JHWL01000003_gene2849	101.0	3.45e-26	N/A	N/A
KOfam	UHGV-1375313_19	K02314	193.2	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-1375313_19	phrog_19	216.6	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1375313_19	UniRef90_A0A316NVS3	232.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-1375313_19	693746.OBV_27440	142.0	3.66e-35	DnaB-like helicase N terminal domain	N/A
Pfam	UHGV-1375313_19	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-1375313_19	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-1375313_19	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1375313_19	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1375313_20	PF21076,MF_00707,NF001220,COG3830	N/A	N/A	N/A	N/A
PHROG	UHGV-1375313_23	phrog_16304	46.4	0.00000000000087	N/A	unknown function
eggNOG-mapper	UHGV-1375313_23	768706.Desor_0679	66.2	0.0000000000401	N/A	N/A
structural_annotation	UHGV-1375313_24	PF00436,MF_00984,NF005242,COG2965	N/A	N/A	N/A	N/A
PHROG	UHGV-1375313_26	phrog_10048	46.6	3.9e-25	N/A	unknown function
eggNOG-mapper	UHGV-1375313_26	1111134.HMPREF1253_1200	129.0	5.68e-34	N/A	N/A
structural_annotation	UHGV-1375313_26	PF04404,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-1375313_27	phrog_298	77.2	6.4e-23	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1375313_27	UniRef90_UPI001ABE80F6	95.9	4.26e-21	PD-(D/E)XK nuclease family protein	N/A
eggNOG-mapper	UHGV-1375313_27	1218075.BAYA01000003_gene606	78.6	0.00000000000000316	N/A	N/A
structural_annotation	UHGV-1375313_27	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-1375313_29	phrog_11947	51.7	0.000000000000015	N/A	unknown function
eggNOG-mapper	UHGV-1375313_29	272134.KB731324_gene2120	55.5	0.0000000557	N/A	N/A
PHROG	UHGV-1375313_30	phrog_9958	108.8	4.1e-32	N/A	unknown function
UniRef90	UHGV-1375313_30	UniRef90_UPI001D08A241	152.0	2.49431e-43	N/A	N/A
eggNOG-mapper	UHGV-1375313_30	1160721.RBI_I01591	133.0	9.67e-37	N/A	N/A
structural_annotation	UHGV-1375313_30	PF19789	N/A	N/A	N/A	N/A
COG	UHGV-1375313_33	COG4226	N/A	N/A	Predicted nuclease of the RNAse H fold, HicB family	N/A
structural_annotation	UHGV-1375313_33	PF16225,TIGR04550,COG4226	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1375313_37	PF04606,NF007241	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1375313_38	PF00210,MF_01441,NF011597,COG1528	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1375313_39	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1375313_40	phrog_16490	70.8	2.8e-20	N/A	unknown function
eggNOG-mapper	UHGV-1375313_40	476272.RUMHYD_01770	63.9	0.00000000131	N/A	N/A
PHROG	UHGV-1375313_42	phrog_21718	44.6	0.0000000000021	N/A	unknown function
eggNOG-mapper	UHGV-1375313_42	1235790.C805_00058	71.2	0.000000000000367	N/A	N/A
structural_annotation	UHGV-1375313_43	PF04545,MF_00245,NF001074,COG2739	N/A	N/A	N/A	N/A
UniRef90	UHGV-1375313_47	UniRef90_A0A316NUT2	53.5	0.000000187	Enolase	N/A
eggNOG-mapper	UHGV-1375313_47	1226322.HMPREF1545_00069	51.6	0.000000199	Phage holin family Hol44, in holin superfamily V	N/A
structural_annotation	UHGV-1375313_47	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1375313_50	phrog_24267	72.2	9.1e-21	N/A	unknown function
UniRef90	UHGV-1375313_50	UniRef90_A0A431UL56	62.4	0.00000000169	Phage tail protein	N/A
eggNOG-mapper	UHGV-1375313_50	1035184.HMPREF1042_1210	79.3	0.00000000000000224	N/A	N/A
COG	UHGV-1375313_50	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1375313_50	COG4675	N/A	N/A	N/A	N/A
PHROG	UHGV-1375313_51	phrog_134	46.7	0.00000000000043	N/A	unknown function
UniRef90	UHGV-1375313_51	UniRef90_UPI0003A81066	47.0	0.00000765	XkdX family protein	N/A
Pfam	UHGV-1375313_51	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
NCBIFam	UHGV-1375313_51	TIGR01669.1	N/A	N/A	XkdX family protein	N/A
structural_annotation	UHGV-1375313_51	PF09693,TIGR01669	N/A	N/A	N/A	N/A
KOfam	UHGV-1375313_54	K19304	54.6	0.0000000000000022	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-1375313_54	phrog_7767	45.2	0.00000000000094	metallo-endopeptidase	other
UniRef90	UHGV-1375313_54	UniRef90_A0A2V2FTH8	274.0	0	Peptidase M23	N/A
eggNOG-mapper	UHGV-1375313_54	665956.HMPREF1032_01628	240.0	0	N/A	N/A
Pfam	UHGV-1375313_54	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
structural_annotation	UHGV-1375313_54	PF01551,NF040883	N/A	N/A	N/A	N/A
PHROG	UHGV-1375313_56	phrog_18190	117.5	6e-35	N/A	unknown function
UniRef90	UHGV-1375313_56	UniRef90_UPI001D0767E1	111.0	5.53e-22	gp58-like family protein	N/A
eggNOG-mapper	UHGV-1375313_56	411471.SUBVAR_06932	276.0	0	N/A	N/A
structural_annotation	UHGV-1375313_56	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1375313_57	phrog_1194	44.5	0.0000000000025	N/A	unknown function
eggNOG-mapper	UHGV-1375313_57	445972.ANACOL_01864	83.6	6.38e-19	N/A	N/A
structural_annotation	UHGV-1375313_57	PF20458,TIGR02126,COG4718	N/A	N/A	N/A	N/A
PHROG	UHGV-1375313_58	phrog_1535	89.0	1.4e-39	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1375313_58	1294142.CINTURNW_1038	63.9	0.000000186	phage tail tape measure protein	N/A
COG	UHGV-1375313_58	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1375313_58	PF10145,TIGR01760	N/A	N/A	N/A	N/A
PHROG	UHGV-1375313_61	phrog_158	65.9	9.4e-19	major tail protein	tail
UniRef90	UHGV-1375313_61	UniRef90_UPI001D06C8CA	101.0	5.91e-25	phage tail protein	N/A
eggNOG-mapper	UHGV-1375313_61	1140002.I570_01436	67.8	0.00000000000188	Phage tail tube protein, TTP	N/A
structural_annotation	UHGV-1375313_61	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1375313_62	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1375313_64	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-1375313_65	UniRef90_A0A1V5X694	64.3	0.0000000000413	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-1375313_65	1280689.AUJC01000003_gene968	48.9	0.00000685	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1375313_65	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-1375313_65	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-1375313_65	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1375313_66	phrog_247	247.2	0	major head protein	head and packaging
UniRef90	UHGV-1375313_66	UniRef90_UPI001BA5448B	237.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-1375313_66	33035.JPJF01000106_gene3132	274.0	0	N/A	N/A
Pfam	UHGV-1375313_66	PF20036	N/A	N/A	Major capsid protein 13-like	Gp13-like
structural_annotation	UHGV-1375313_66	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1375313_68	phrog_64	178.0	0	portal protein	head and packaging
UniRef90	UHGV-1375313_68	UniRef90_UPI001D06C00B	378.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1375313_68	1121866.AUGK01000003_gene1429	327.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1375313_68	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1375313_68	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1375313_70	phrog_38	186.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-1375313_70	UniRef90_UPI00164E3A67	436.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1375313_70	1298920.KI911353_gene2682	289.0	0	TIGRFAM Phage	N/A
COG	UHGV-1375313_70	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1375313_70	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1375313_71	445973.CLOBAR_02331	60.1	0.000000379	N/A	N/A
structural_annotation	UHGV-1375313_71	PF13463,MF_01909,NF040642,COG1846	N/A	N/A	N/A	N/A