UHGV-1376551 (vOTU-001658)

Viral Genome: UHGV-1376551

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1376551
vOTU ID	vOTU-001658
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0244166
Associated BioSample	SAMEA2338852
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	11
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9823
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	22.1
Jumbo phage	No

Genome content
Genome length (bp)	35,736
GC content	57.74%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	67
CDS density	93%
Average CDS length (bps)	495.67
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1376551_3	phrog_13256	67.2	1.4e-19	N/A	unknown function
eggNOG-mapper	UHGV-1376551_3	1226322.HMPREF1545_00132	73.6	2.37e-16	N/A	N/A
PHROG	UHGV-1376551_4	phrog_14030	144.8	5.29691e-43	N/A	unknown function
UniRef90	UHGV-1376551_4	UniRef90_R6LL81	248.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-1376551_4	1121866.AUGK01000003_gene1444	92.4	9.48e-19	amidase activity	N/A
COG	UHGV-1376551_4	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
structural_annotation	UHGV-1376551_5	PF13412,MF_00674,COG1342	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1376551_6	696369.KI912183_gene1502	54.7	0.00000148	N/A	N/A
structural_annotation	UHGV-1376551_6	PF14528,PF05204,MF_01420,TIGR00647,COG3780	N/A	N/A	N/A	N/A
PHROG	UHGV-1376551_8	phrog_25567	41.3	0.00000000002	N/A	unknown function
UniRef90	UHGV-1376551_8	UniRef90_UPI00164AED9E	92.0	6.74e-22	helix-turn-helix domain-containing protein	N/A
COG	UHGV-1376551_8	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-1376551_8	PF13560,NF040522,COG2944	N/A	N/A	N/A	N/A
UniRef90	UHGV-1376551_12	UniRef90_A0A7M1RSZ3	73.9	0.00000000000024	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-1376551_12	1378168.N510_03079	69.7	0.00000000000395	N/A	N/A
KOfam	UHGV-1376551_13	K06400	378.2	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1376551_13	phrog_95	366.3	0	integrase	integration and excision
UniRef90	UHGV-1376551_13	UniRef90_UPI00189960B8	504.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1376551_13	1235835.C814_00825	412.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1376551_13	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1376551_13	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1376551_13	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1376551_13	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1376551_13	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-1376551_14	UniRef90_A0A810PZB1	73.6	0.000000000000177	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1376551_14	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1376551_14	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1376551_14	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1376551_15	phrog_10292	74.2	1.1e-21	N/A	unknown function
UniRef90	UHGV-1376551_15	UniRef90_A0A416W984	95.9	9.04e-23	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1376551_15	537013.CLOSTMETH_02269	80.5	3.89e-17	TM2 domain	N/A
Pfam	UHGV-1376551_15	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-1376551_15	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-1376551_15	COG2314	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1376551_16	622312.ROSEINA2194_02761	59.3	0.0000000495	NOG18738 non supervised orthologous group	N/A
COG	UHGV-1376551_16	COG2169	N/A	N/A	Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains	N/A
structural_annotation	UHGV-1376551_16	PF02805	N/A	N/A	N/A	N/A
KOfam	UHGV-1376551_18	K22300	52.4	0.000000000000013	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
UniRef90	UHGV-1376551_18	UniRef90_A0A1Y4L0A2	132.0	1.39e-37	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1376551_18	748224.HMPREF9436_01444	112.0	4.48e-30	N/A	N/A
Pfam	UHGV-1376551_18	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1376551_18	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1376551_18	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1376551_22	642492.Clole_0961	70.9	0.00000000000000265	N/A	N/A
structural_annotation	UHGV-1376551_22	PF12286	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1376551_23	PF10548	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1376551_27	PF05082	N/A	N/A	N/A	N/A
PHROG	UHGV-1376551_31	phrog_36399	44.3	0.000000000004	N/A	unknown function
PHROG	UHGV-1376551_36	phrog_22543	46.7	0.00000000000052	N/A	unknown function
PHROG	UHGV-1376551_37	phrog_190	103.2	2.5e-30	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1376551_37	UniRef90_UPI0006C2AC63	126.0	3.51e-34	N/A	N/A
eggNOG-mapper	UHGV-1376551_37	693746.OBV_25250	119.0	4.64e-32	N/A	N/A
Pfam	UHGV-1376551_37	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1376551_37	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-1376551_43	phrog_21498	302.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1376551_43	78346.BRUM_0376	260.0	0	DNA binding	N/A
COG	UHGV-1376551_43	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1376551_43	PF05869,TIGR01712	N/A	N/A	N/A	N/A
PHROG	UHGV-1376551_44	phrog_3584	110.7	1.3e-32	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1376551_44	537013.CLOSTMETH_02141	74.7	0.000000000000131	N/A	N/A
structural_annotation	UHGV-1376551_44	PF21578,MF_00360	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1376551_45	1297617.JPJD01000059_gene2640	80.5	1.62e-17	N/A	N/A
structural_annotation	UHGV-1376551_45	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1376551_46	phrog_119	48.7	0.0000000000001	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1376551_46	UniRef90_A0A174XSZ8	124.0	3.05e-34	Prophage LambdaBa04, GP54	N/A
eggNOG-mapper	UHGV-1376551_46	1235793.C809_01915	118.0	2.54e-32	HNH endonuclease	N/A
Pfam	UHGV-1376551_46	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1376551_46	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1376551_47	phrog_1066	129.2	1.6e-38	N/A	unknown function
eggNOG-mapper	UHGV-1376551_47	1341151.ASZU01000004_gene265	119.0	3.08e-33	N/A	N/A
structural_annotation	UHGV-1376551_47	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-1376551_48	phrog_9	381.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-1376551_48	UniRef90_A0A1Y3W5R1	785.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1376551_48	1203606.HMPREF1526_00981	736.0	0	Terminase	N/A
Pfam	UHGV-1376551_48	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1376551_48	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1376551_48	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1376551_48	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1376551_49	phrog_12	176.2	0	portal protein	head and packaging
UniRef90	UHGV-1376551_49	UniRef90_C4GAS6	499.0	0	Putative phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-1376551_49	626523.GCWU000342_01027	499.0	0	Portal protein	N/A
Pfam	UHGV-1376551_49	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1376551_49	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1376551_49	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1376551_50	K01358	132.6	4.7e-39	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1376551_50	phrog_94	199.7	0	head maturation protease	head and packaging
UniRef90	UHGV-1376551_50	UniRef90_UPI0018979DC8	202.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-1376551_50	1280689.AUJC01000011_gene1520	185.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1376551_50	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1376551_50	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1376551_50	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1376551_51	phrog_10	181.5	0	major head protein	head and packaging
UniRef90	UHGV-1376551_51	UniRef90_UPI00189AE5FE	405.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1376551_51	1280689.AUJC01000011_gene1521	388.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1376551_51	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1376551_51	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1376551_51	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1376551_51	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1376551_52	phrog_5223	46.0	0.00000000000074	neck protein	connector
UniRef90	UHGV-1376551_52	UniRef90_B6W9Y5	61.6	0.000000000257	Putative phage DNA packaging protein	N/A
eggNOG-mapper	UHGV-1376551_52	561177.ANHYDRO_01411	61.6	0.0000000000431	N/A	N/A
PHROG	UHGV-1376551_53	phrog_1951	84.6	7.9e-25	head-tail adaptor	connector
UniRef90	UHGV-1376551_53	UniRef90_UPI00148DC24D	67.8	0.00000000000142	phage head closure protein	N/A
eggNOG-mapper	UHGV-1376551_53	1094508.Tsac_2422	58.5	0.000000000905	Phage head-tail joining protein	N/A
Pfam	UHGV-1376551_53	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-1376551_53	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1376551_53	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1376551_53	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1376551_54	1487921.DP68_11350	55.5	0.0000000175	N/A	N/A
structural_annotation	UHGV-1376551_54	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1376551_55	phrog_5	44.6	0.0000000000037	tail completion or Neck1 protein	connector
structural_annotation	UHGV-1376551_55	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1376551_56	phrog_88	85.4	7.5e-25	major tail protein	tail
UniRef90	UHGV-1376551_56	UniRef90_S0FUN2	114.0	9.42e-29	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1376551_56	1195236.CTER_5106	114.0	1.58e-29	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1376551_56	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-1376551_56	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1376551_56	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1376551_57	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1376551_58	phrog_33680	150.4	8.40779e-45	N/A	unknown function
UniRef90	UHGV-1376551_58	UniRef90_A0A1M6L1P7	224.0	0	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-1376551_58	1195236.CTER_5104	221.0	0	nuclear chromosome segregation	N/A
COG	UHGV-1376551_58	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1376551_58	TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1376551_59	phrog_37549	81.6	1.2e-26	virion structural protein	head and packaging
UniRef90	UHGV-1376551_59	UniRef90_A0A3D0W045	226.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-1376551_59	1195236.CTER_5103	128.0	3.2e-28	N/A	N/A
structural_annotation	UHGV-1376551_59	PF02010,PF06848,PF19266,MF_04116,NF033679,NF032891,TIGR01633,TIGR04488,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1376551_60	phrog_26795	131.6	3.9e-39	N/A	unknown function
UniRef90	UHGV-1376551_60	UniRef90_A0A5J6T4K8	135.0	1.57e-32	Minor tail protein	N/A
eggNOG-mapper	UHGV-1376551_60	1195236.CTER_5102	140.0	1.25e-35	N/A	N/A
structural_annotation	UHGV-1376551_60	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1376551_61	PF18614,MF_00085,NF003076	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1376551_62	PF10651	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1376551_63	411471.SUBVAR_06929	310.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-1376551_63	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
PHROG	UHGV-1376551_64	phrog_37900	317.5	0	N/A	unknown function
UniRef90	UHGV-1376551_64	UniRef90_UPI001C3EA4DF	353.0	0	N/A	N/A
eggNOG-mapper	UHGV-1376551_64	552398.HMPREF0866_03098	258.0	0	N/A	N/A
Pfam	UHGV-1376551_64	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1376551_64	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1376551_64	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-1376551_65	phrog_29409	46.7	0.00000000000028	N/A	unknown function
structural_annotation	UHGV-1376551_67	PF14600	N/A	N/A	N/A	N/A