UHGV-1377364 (vOTU-057957)

Viral Genome: UHGV-1377364

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1377364
vOTU ID	vOTU-057957
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0286224
Associated BioSample	SAMN02334028
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	8
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9809
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	33.08
Jumbo phage	No

Genome content
Genome length (bp)	43,331
GC content	50.02%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	61
CDS density	95%
Average CDS length (bps)	676.33
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1377364_2	UniRef90_UPI0008894789	80.5	2.92e-18	N/A	N/A
eggNOG-mapper	UHGV-1377364_2	526218.Sterm_3925	59.3	0.000000000104	N/A	N/A
structural_annotation	UHGV-1377364_2	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1377364_3	K22300	47.3	0.00000000000039	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1377364_3	phrog_8	64.0	3.4e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-1377364_3	UniRef90_D1AGN9	89.4	9.51e-21	Transcriptional regulator, XRE family	N/A
eggNOG-mapper	UHGV-1377364_3	526218.Sterm_3926	89.4	1.59e-21	sequence-specific DNA binding	N/A
Pfam	UHGV-1377364_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1377364_3	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1377364_3	PF01381,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
Pfam	UHGV-1377364_4	PF09811	N/A	N/A	Essential protein Yae1, N terminal	Yae1_N
KOfam	UHGV-1377364_5	K14059	146.8	2.39622e-43	int; integrase	N/A
PHROG	UHGV-1377364_5	phrog_1	139.5	2.89999e-41	integrase	integration and excision
UniRef90	UHGV-1377364_5	UniRef90_A0A355NK33	254.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-1377364_5	887325.HMPREF0381_0346	244.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-1377364_5	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1377364_5	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1377364_5	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
Pfam	UHGV-1377364_7	PF02915	N/A	N/A	Rubrerythrin	Rubrerythrin
COG	UHGV-1377364_8	COG2931	N/A	N/A	Ca2+-binding protein, RTX toxin-related	N/A
structural_annotation	UHGV-1377364_8	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1377364_9	phrog_16490	59.7	4.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-1377364_9	641112.ACOK01000103_gene525	123.0	3.09e-32	N/A	N/A
UniRef90	UHGV-1377364_11	UniRef90_R6GNZ5	97.8	7.48e-22	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-1377364_11	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1377364_11	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1377364_12	phrog_14030	172.3	0	N/A	unknown function
UniRef90	UHGV-1377364_12	UniRef90_A0A0D0SGD3	206.0	0	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-1377364_12	1321782.HMPREF1986_02283	194.0	0	NlpC/P60 family	N/A
Pfam	UHGV-1377364_12	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
COG	UHGV-1377364_12	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1377364_12	PF05382,PF08230,NF033742	N/A	N/A	N/A	N/A
PHROG	UHGV-1377364_13	phrog_6918	69.2	4.9e-20	holin	lysis
UniRef90	UHGV-1377364_13	UniRef90_R7N9M5	77.8	3.73e-16	LL-H family phage holin	N/A
eggNOG-mapper	UHGV-1377364_13	1235792.C808_00574	67.4	0.000000000000651	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1377364_13	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-1377364_13	PF09682,TIGR01673	N/A	N/A	N/A	N/A
UniRef90	UHGV-1377364_16	UniRef90_UPI00047BE855	181.0	0	BppU family phage baseplate upper protein	N/A
Pfam	UHGV-1377364_16	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
PHROG	UHGV-1377364_17	phrog_22978	918.2	0	N/A	unknown function
UniRef90	UHGV-1377364_17	UniRef90_A0A416JVP5	658.0	0	PBECR5 domain-containing protein	N/A
eggNOG-mapper	UHGV-1377364_17	1410650.JHWL01000003_gene2814	887.0	0	N/A	N/A
Pfam	UHGV-1377364_17	PF18814	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5	PBECR5
Pfam	UHGV-1377364_17	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
eggNOG-mapper	UHGV-1377364_18	1410650.JHWL01000003_gene2815	216.0	0	N/A	N/A
COG	UHGV-1377364_21	COG2272	N/A	N/A	Carboxylesterase type B	N/A
structural_annotation	UHGV-1377364_22	NF040910	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1377364_24	1123075.AUDP01000020_gene1527	58.9	0.00000165	N/A	N/A
PHROG	UHGV-1377364_26	phrog_511	174.3	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1377364_26	1410650.JHWL01000003_gene2827	575.0	0	N/A	N/A
structural_annotation	UHGV-1377364_26	PF11134,NF038015,TIGR03721,COG3823	N/A	N/A	N/A	N/A
PHROG	UHGV-1377364_27	phrog_12105	77.4	1.5e-22	N/A	unknown function
PHROG	UHGV-1377364_28	phrog_15239	54.3	0.000000000000002	N/A	unknown function
PHROG	UHGV-1377364_29	phrog_1357	263.6	0	major head protein	head and packaging
UniRef90	UHGV-1377364_29	UniRef90_A0A7G9GB60	477.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1377364_29	1410650.JHWL01000003_gene2830	454.0	0	N/A	N/A
Pfam	UHGV-1377364_29	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-1377364_29	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1377364_29	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1377364_30	phrog_13908	198.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1377364_30	1410650.JHWL01000003_gene2831	271.0	0	N/A	N/A
KOfam	UHGV-1377364_31	K07584	54.6	0.000000000000002	N/A	N/A
PHROG	UHGV-1377364_31	phrog_4478	63.7	2.3e-18	peptidase	other
UniRef90	UHGV-1377364_31	UniRef90_A0A396QPR2	65.1	0.0000000000141	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-1377364_31	926561.KB900617_gene1817	54.7	0.0000000426	Cysteine protease Prp	N/A
Pfam	UHGV-1377364_31	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-1377364_31	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1377364_31	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-1377364_32	phrog_156	317.3	0	portal protein	head and packaging
eggNOG-mapper	UHGV-1377364_32	1410650.JHWL01000003_gene2833	876.0	0	N/A	N/A
structural_annotation	UHGV-1377364_32	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1377364_33	K06909	124.9	7.6e-37	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1377364_33	phrog_979	127.8	5.7e-39	terminase large subunit	head and packaging
UniRef90	UHGV-1377364_33	UniRef90_UPI0010311CEE	683.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1377364_33	1410650.JHWL01000003_gene2834	653.0	0	N/A	N/A
Pfam	UHGV-1377364_33	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-1377364_33	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1377364_33	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1377364_34	K07474	67.5	4.1e-19	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1377364_34	phrog_51	65.8	9.1e-19	terminase small subunit	head and packaging
UniRef90	UHGV-1377364_34	UniRef90_UPI0006862FC2	76.3	0.0000000000000102	terminase small subunit	N/A
eggNOG-mapper	UHGV-1377364_34	1123518.ARWI01000001_gene1821	65.1	0.0000000000243	DNA packaging	N/A
Pfam	UHGV-1377364_34	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1377364_34	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
KOfam	UHGV-1377364_36	K03111	122.6	5e-36	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1377364_36	phrog_44	123.8	1.5e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1377364_36	UniRef90_UPI000423A315	217.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1377364_36	1280685.AUKC01000081_gene1299	217.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1377364_36	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1377364_36	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1377364_36	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1377364_36	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1377364_36	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1377364_37	PF03831,COG4991	N/A	N/A	N/A	N/A
UniRef90	UHGV-1377364_38	UniRef90_UPI0018A09237	59.7	0.0000000106	N/A	N/A
eggNOG-mapper	UHGV-1377364_38	411473.RUMCAL_00360	62.4	0.000000000157	N/A	N/A
structural_annotation	UHGV-1377364_38	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-1377364_39	phrog_774	64.4	2.4e-18	N/A	unknown function
eggNOG-mapper	UHGV-1377364_39	1435051.BMOU_0242	62.0	0.000000000232	Helix-turn-helix domain	N/A
COG	UHGV-1377364_39	COG3311	N/A	N/A	DNA-binding transcriptional regulator AlpA	N/A
UniRef90	UHGV-1377364_41	UniRef90_A0A1M5D6R4	53.1	0.000000216	N/A	N/A
Pfam	UHGV-1377364_41	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-1377364_42	phrog_15198	40.3	0.000000000035	N/A	unknown function
UniRef90	UHGV-1377364_42	UniRef90_UPI001D064D4E	112.0	7.87e-30	N/A	N/A
Pfam	UHGV-1377364_42	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1377364_42	PF04448,NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-1377364_44	phrog_21026	52.3	0.0000000000000082	N/A	unknown function
PHROG	UHGV-1377364_47	phrog_7566	62.3	6.4e-18	N/A	unknown function
eggNOG-mapper	UHGV-1377364_47	742740.HMPREF9474_04319	67.8	0.0000000000000765	N/A	N/A
KOfam	UHGV-1377364_49	K01520	81.4	1.3e-23	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1377364_49	phrog_135	74.0	2.2e-21	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1377364_49	UniRef90_A0A0B2ZZ28	100.0	1.58e-24	Deoxyuridine 5'-triphosphate nucleotidohydrolase, dUTP pyrophosphatase	N/A
eggNOG-mapper	UHGV-1377364_49	290397.Adeh_1108	84.3	9.25e-19	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	N/A
Pfam	UHGV-1377364_49	PF00692	N/A	N/A	dUTPase	dUTPase
COG	UHGV-1377364_49	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1377364_49	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-1377364_51	phrog_15768	66.0	5.4e-19	N/A	unknown function
eggNOG-mapper	UHGV-1377364_51	888059.HMPREF9071_2037	73.9	0.0000000000000506	N/A	N/A
Pfam	UHGV-1377364_51	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-1377364_51	PF19808,PF07261,TIGR01446,COG3935	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1377364_52	457412.RSAG_00329	67.4	0.000000000000263	N/A	N/A
PHROG	UHGV-1377364_53	phrog_72	44.3	0.0000000000027	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1377364_53	UniRef90_A0A285PU94	95.5	3.63e-21	Recombinase NinB	N/A
eggNOG-mapper	UHGV-1377364_53	1410650.JHWL01000003_gene2850	109.0	2.13e-27	N/A	N/A
structural_annotation	UHGV-1377364_53	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-1377364_54	phrog_14970	215.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1377364_54	411468.CLOSCI_00315	186.0	0	double-strand break repair protein	N/A
COG	UHGV-1377364_54	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-1377364_54	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1377364_55	phrog_253	175.7	0	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1377364_55	UniRef90_UPI00188A68AB	142.0	3.72e-40	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-1377364_55	1410650.JHWL01000003_gene2853	122.0	1.85e-33	Siphovirus Gp157	N/A
Pfam	UHGV-1377364_55	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1377364_55	PF05565,NF002139	N/A	N/A	N/A	N/A