UHGV-1378996 (vOTU-033962)

Viral Genome: UHGV-1378996

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1378996
vOTU ID	vOTU-033962
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0170592
Associated BioSample	SAMN02334086
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	60.8 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9827
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	14.7
Jumbo phage	No

Genome content
Genome length (bp)	23,279
GC content	42.03%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	32
CDS density	93%
Average CDS length (bps)	679.50
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 60.8)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1378996_1	phrog_24159	46.6	0.00000000000024	tail fiber protein	tail
eggNOG-mapper	UHGV-1378996_1	476272.RUMHYD_01994	75.1	0.00000000000122	N/A	N/A
PHROG	UHGV-1378996_2	phrog_6616	562.4	0	tail protein	tail
UniRef90	UHGV-1378996_2	UniRef90_A0A0J1FXD9	530.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1378996_2	476272.RUMHYD_01992	327.0	0	N/A	N/A
PHROG	UHGV-1378996_3	phrog_1194	68.3	9.9e-20	N/A	unknown function
eggNOG-mapper	UHGV-1378996_3	33035.JPJF01000093_gene2242	150.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-1378996_3	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1378996_4	phrog_1535	260.9	0	tail length tape measure protein	tail
UniRef90	UHGV-1378996_4	UniRef90_A0A1C5PIN9	899.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1378996_4	33035.JPJF01000093_gene2243	511.0	0	phage tail tape measure protein	N/A
COG	UHGV-1378996_4	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1378996_4	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1378996_5	phrog_8355	113.1	6.2e-34	N/A	unknown function
UniRef90	UHGV-1378996_5	UniRef90_UPI001F1300CC	259.0	0	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-1378996_5	1280692.AUJL01000027_gene2152	110.0	1.46e-29	N/A	N/A
Pfam	UHGV-1378996_5	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1378996_5	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1378996_6	phrog_8300	108.0	4.8e-32	N/A	unknown function
eggNOG-mapper	UHGV-1378996_6	33035.JPJF01000093_gene2245	118.0	2.28e-33	N/A	N/A
structural_annotation	UHGV-1378996_6	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1378996_7	phrog_820	104.5	5.8e-31	major tail protein	tail
eggNOG-mapper	UHGV-1378996_7	33035.JPJF01000093_gene2246	222.0	0	N/A	N/A
structural_annotation	UHGV-1378996_7	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1378996_8	phrog_2595	81.7	7.8e-24	head-tail connector protein	connector
UniRef90	UHGV-1378996_8	UniRef90_UPI00164BAA81	271.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1378996_8	1282664.H354_06686	107.0	4.53e-28	N/A	N/A
Pfam	UHGV-1378996_8	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1378996_8	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1378996_9	phrog_556	63.4	3.3e-18	minor head protein	head and packaging
eggNOG-mapper	UHGV-1378996_9	742740.HMPREF9474_03509	167.0	0	N/A	N/A
PHROG	UHGV-1378996_10	phrog_8710	145.2	1.49939e-43	N/A	unknown function
eggNOG-mapper	UHGV-1378996_10	742740.HMPREF9474_03508	157.0	0	N/A	N/A
structural_annotation	UHGV-1378996_10	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1378996_11	phrog_541	88.6	5.3e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-1378996_11	33035.JPJF01000093_gene2250	171.0	0	N/A	N/A
PHROG	UHGV-1378996_12	phrog_1378	74.8	9e-22	N/A	unknown function
eggNOG-mapper	UHGV-1378996_12	1280692.AUJL01000027_gene2159	69.7	0.00000000000000807	N/A	N/A
PHROG	UHGV-1378996_13	phrog_422	339.6	0	major head protein	head and packaging
UniRef90	UHGV-1378996_13	UniRef90_A0A3R6PT58	510.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-1378996_13	33035.JPJF01000093_gene2252	512.0	0	N/A	N/A
structural_annotation	UHGV-1378996_13	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1378996_14	phrog_2303	149.4	2.24208e-44	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1378996_14	1304866.K413DRAFT_0806	178.0	0	N/A	N/A
PHROG	UHGV-1378996_16	phrog_581	248.5	0	minor head protein	head and packaging
UniRef90	UHGV-1378996_16	UniRef90_UPI00164A2DDC	1026.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1378996_16	33035.JPJF01000093_gene2255	484.0	0	N/A	N/A
Pfam	UHGV-1378996_16	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1378996_16	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-1378996_16	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1378996_17	phrog_533	285.3	0	portal protein	head and packaging
UniRef90	UHGV-1378996_17	UniRef90_UPI001F14233C	978.0	0	capsid protein	N/A
eggNOG-mapper	UHGV-1378996_17	742740.HMPREF9474_03501	528.0	0	N/A	N/A
structural_annotation	UHGV-1378996_17	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1378996_18	K06909	97.1	2.2e-28	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1378996_18	phrog_29775	40.4	0.000000000043	N/A	unknown function
UniRef90	UHGV-1378996_18	UniRef90_UPI00164A3891	962.0	0	terminase	N/A
eggNOG-mapper	UHGV-1378996_18	394503.Ccel_3050	659.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-1378996_18	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1378996_18	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1378996_19	phrog_309	192.3	0	terminase small subunit	head and packaging
UniRef90	UHGV-1378996_19	UniRef90_UPI000AC737F1	234.0	0	helix-turn-helix domain containing protein	N/A
eggNOG-mapper	UHGV-1378996_19	411470.RUMGNA_02210	186.0	0	transposase activity	N/A
Pfam	UHGV-1378996_19	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
COG	UHGV-1378996_19	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-1378996_19	PF07141	N/A	N/A	N/A	N/A
PHROG	UHGV-1378996_20	phrog_36	65.6	9.4e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-1378996_20	UniRef90_UPI001F14539B	250.0	0	N/A	N/A
eggNOG-mapper	UHGV-1378996_20	1235800.C819_02243	189.0	0	N/A	N/A
Pfam	UHGV-1378996_20	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-1378996_20	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
UniRef90	UHGV-1378996_22	UniRef90_A0A3R6LT65	155.0	0	ABC transporter ATP-binding protein	N/A
UniRef90	UHGV-1378996_23	UniRef90_A0A413SPC3	144.0	2.62043e-43	N/A	N/A
Pfam	UHGV-1378996_23	PF20037	N/A	N/A	N/A	DUF6440
structural_annotation	UHGV-1378996_23	PF20037	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1378996_25	PF09889,COG4068	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1378996_26	411459.RUMOBE_01111	77.4	4.37e-16	N/A	N/A
KOfam	UHGV-1378996_27	K00571	117.4	1.5e-34	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1378996_27	phrog_67	98.5	3.3e-29	DNA methyltransferase	other
UniRef90	UHGV-1378996_27	UniRef90_UPI001D09885E	515.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-1378996_27	658655.HMPREF0988_00878	480.0	0	DNA methylase	N/A
PADLOC	UHGV-1378996_27	MTase_II_00157	89.2	6e-26	Type II methyltransferase	RM
Pfam	UHGV-1378996_27	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1378996_27	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1378996_27	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1378996_28	phrog_424	84.7	9.5e-25	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1378996_28	UniRef90_UPI001C01C809	505.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1378996_28	397291.C804_05723	384.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-1378996_28	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1378996_28	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1378996_28	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1378996_30	phrog_20593	55.1	6.7e-16	N/A	unknown function
PHROG	UHGV-1378996_31	phrog_599	48.5	0.00000000000018	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1378996_31	UniRef90_A0A3R6D179	197.0	0	Restriction alleviation protein, Lar family	N/A
Pfam	UHGV-1378996_31	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-1378996_31	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
structural_annotation	UHGV-1378996_31	TIGR03655	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1378996_32	742740.HMPREF9474_03128	73.2	1.75e-16	N/A	N/A