UHGV-1379792 (vOTU-022080)

Viral Genome: UHGV-1379792

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1379792
vOTU ID	vOTU-022080
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0246706
Associated BioSample	SAMEA3541482
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	86.89 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	11
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9815
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	18.23
Jumbo phage	No

Genome content
Genome length (bp)	36,204
GC content	56.24%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	65
CDS density	93%
Average CDS length (bps)	520.52
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 86.89)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1379792_2	K18843	61.3	2.3e-17	hicB; antitoxin HicB	N/A
PHROG	UHGV-1379792_2	phrog_497	81.3	1.7e-23	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1379792_2	UniRef90_A0A0S2W5Q3	239.0	0	N/A	N/A
eggNOG-mapper	UHGV-1379792_2	397290.C810_04356	194.0	0	HicB_like antitoxin of bacterial toxin-antitoxin system	N/A
Pfam	UHGV-1379792_2	PF15919	N/A	N/A	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
COG	UHGV-1379792_2	COG1598	N/A	N/A	Antitoxin component HicB of the HicAB toxin-antitoxin system	N/A
structural_annotation	UHGV-1379792_2	PF15919,COG1598	N/A	N/A	N/A	N/A
KOfam	UHGV-1379792_3	K07339	45.4	0.0000000000013	hicA; mRNA interferase HicA [EC:3.1.-.-]	N/A
PHROG	UHGV-1379792_3	phrog_353	85.6	3.2e-25	toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1379792_3	UniRef90_A0A1I3T1Z8	109.0	2.07e-30	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	N/A
eggNOG-mapper	UHGV-1379792_3	243275.TDE_1838	92.0	4.15e-24	HicA toxin of bacterial toxin-antitoxin,	N/A
Pfam	UHGV-1379792_3	PF07927	N/A	N/A	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
COG	UHGV-1379792_3	COG1724	N/A	N/A	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	N/A
structural_annotation	UHGV-1379792_3	PF07927,COG1724	N/A	N/A	N/A	N/A
PHROG	UHGV-1379792_4	phrog_194	48.1	0.00000000000019	head scaffolding protein	head and packaging
UniRef90	UHGV-1379792_4	UniRef90_A0A6B9SU02	147.0	1.01e-40	Fibronectin autolysin	N/A
PHROG	UHGV-1379792_5	phrog_544	115.5	5e-34	major head protein	head and packaging
UniRef90	UHGV-1379792_5	UniRef90_A0A1C6B5R0	334.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1379792_5	476272.RUMHYD_01776	313.0	0	N/A	N/A
structural_annotation	UHGV-1379792_5	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1379792_6	1226322.HMPREF1545_00051	194.0	0	N/A	N/A
PHROG	UHGV-1379792_8	phrog_17977	77.3	1.4e-22	N/A	unknown function
UniRef90	UHGV-1379792_8	UniRef90_UPI00141211AB	108.0	2.68e-28	head-tail adaptor protein	N/A
Pfam	UHGV-1379792_8	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-1379792_8	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1379792_9	phrog_17405	48.5	0.00000000000013	head protein	head and packaging
UniRef90	UHGV-1379792_9	UniRef90_A0A415JI88	121.0	2.83e-33	N/A	N/A
structural_annotation	UHGV-1379792_9	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-1379792_10	phrog_885	98.7	4.6e-29	major tail protein	tail
UniRef90	UHGV-1379792_10	UniRef90_UPI000BE41A82	58.5	0.000000623	chitobiase/beta-hexosaminidase C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1379792_10	1111121.HMPREF1247_0789	178.0	0	N/A	N/A
structural_annotation	UHGV-1379792_10	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-1379792_11	UniRef90_A0A285PXU7	78.6	4.28e-16	Consensus disorder prediction	N/A
PHROG	UHGV-1379792_13	phrog_17658	63.9	2.8e-18	N/A	unknown function
UniRef90	UHGV-1379792_13	UniRef90_UPI0014004675	74.3	0.000000000000172	SHOCT domain-containing protein	N/A
eggNOG-mapper	UHGV-1379792_13	1280692.AUJL01000004_gene836	71.6	0.000000000000148	N/A	N/A
structural_annotation	UHGV-1379792_13	PF18116	N/A	N/A	N/A	N/A
PHROG	UHGV-1379792_14	phrog_58	196.1	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1379792_14	1160721.RBI_II00528	224.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-1379792_14	COG1006	N/A	N/A	Multisubunit Na+/H+ antiporter, MnhC subunit	N/A
structural_annotation	UHGV-1379792_14	PF20155,COG3941	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1379792_15	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1379792_16	phrog_13879	489.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1379792_16	1235797.C816_02659	721.0	0	N/A	N/A
structural_annotation	UHGV-1379792_16	PF14594,PF06588,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1379792_17	1226322.HMPREF1545_00062	57.4	0.000000398	N/A	N/A
structural_annotation	UHGV-1379792_17	PF00354	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1379792_18	552398.HMPREF0866_02181	57.4	0.00000024	N/A	N/A
UniRef90	UHGV-1379792_20	UniRef90_A0A8J6JAX9	53.1	0.0000000232	XkdX family protein	N/A
structural_annotation	UHGV-1379792_20	PF09693,TIGR01669	N/A	N/A	N/A	N/A
PHROG	UHGV-1379792_21	phrog_37604	182.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1379792_21	1232443.BAIA02000078_gene10	132.0	3.07e-37	N/A	N/A
PHROG	UHGV-1379792_22	phrog_1129	63.7	2.2e-18	holin	lysis
UniRef90	UHGV-1379792_22	UniRef90_UPI001D084907	122.0	1.95e-34	phage holin family protein	N/A
eggNOG-mapper	UHGV-1379792_22	1007096.BAGW01000036_gene2663	109.0	3.7e-30	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1379792_22	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1379792_22	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-1379792_24	K01448	123.6	2.2e-36	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1379792_24	phrog_435	122.5	3.5e-36	endolysin	lysis
UniRef90	UHGV-1379792_24	UniRef90_UPI001C107E48	102.0	5.56e-20	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1379792_24	1410668.JNKC01000001_gene1675	158.0	4.99983e-42	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1379792_24	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-1379792_24	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
COG	UHGV-1379792_24	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1379792_24	PF01520,PF09992,PF01471,MF_00562,TIGR02883,COG0860,COG4632,COG3409	N/A	N/A	N/A	N/A
UniRef90	UHGV-1379792_25	UniRef90_A0A1C6JAI6	75.9	2.48e-16	RNA polymerase sigma factor, sigma-70 family	N/A
structural_annotation	UHGV-1379792_25	PF16509,MF_00674,NF008895,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1379792_27	phrog_3754	100.5	1.6e-29	N/A	unknown function
eggNOG-mapper	UHGV-1379792_27	476272.RUMHYD_01764	179.0	0	N/A	N/A
PHROG	UHGV-1379792_28	phrog_21718	119.9	1.6e-35	N/A	unknown function
eggNOG-mapper	UHGV-1379792_28	397290.C810_05210	75.5	0.00000000000000515	N/A	N/A
PHROG	UHGV-1379792_29	phrog_22984	107.8	5.2e-32	N/A	unknown function
PHROG	UHGV-1379792_30	phrog_16490	213.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1379792_30	658655.HMPREF0988_00917	184.0	0	N/A	N/A
PHROG	UHGV-1379792_31	phrog_20016	171.2	0	N/A	unknown function
UniRef90	UHGV-1379792_31	UniRef90_A0A285PT46	158.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1379792_31	1226322.HMPREF1545_00077	144.0	1.26958e-42	N/A	N/A
structural_annotation	UHGV-1379792_31	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1379792_32	476272.RUMHYD_01772	51.2	0.00000584	N/A	N/A
eggNOG-mapper	UHGV-1379792_33	1226322.HMPREF1545_00079	134.0	3.53e-39	N/A	N/A
KOfam	UHGV-1379792_34	K14059	220.3	0	int; integrase	N/A
PHROG	UHGV-1379792_34	phrog_1	219.5	0	integrase	integration and excision
UniRef90	UHGV-1379792_34	UniRef90_UPI0018A8CCD8	551.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-1379792_34	1408437.JNJN01000039_gene380	178.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-1379792_34	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1379792_34	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1379792_34	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1379792_34	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1379792_35	UniRef90_A0A3D1I232	77.4	1.25e-16	zinc_ribbon_2 domain-containing protein	N/A
structural_annotation	UHGV-1379792_35	TIGR04165,COG3478	N/A	N/A	N/A	N/A
PHROG	UHGV-1379792_36	phrog_87	86.3	2.7e-25	metallo-protease	other
UniRef90	UHGV-1379792_36	UniRef90_A0A174DB16	168.0	0	Metallopeptidase immA	N/A
eggNOG-mapper	UHGV-1379792_36	1294142.CINTURNW_0291	134.0	2.83e-38	IrrE N-terminal-like domain	N/A
Pfam	UHGV-1379792_36	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1379792_36	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1379792_36	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-1379792_37	phrog_8	46.2	0.00000000000088	transcriptional regulator	transcription regulation
UniRef90	UHGV-1379792_37	UniRef90_A0A416DHG0	130.0	4.34e-36	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1379792_37	742740.HMPREF9474_03481	118.0	4.07e-32	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1379792_37	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1379792_37	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-1379792_37	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1379792_38	UniRef90_A0A1C7FQD9	105.0	6.67e-28	Transcriptional regulator	N/A
Pfam	UHGV-1379792_38	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1379792_40	PF12728,NF040990,COG3311	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1379792_42	PF13560	N/A	N/A	N/A	N/A
KOfam	UHGV-1379792_45	K19171	74.9	2e-22	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-1379792_45	phrog_77	213.1	0	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1379792_45	UniRef90_UPI001959E3D8	645.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1379792_45	1203606.HMPREF1526_00309	403.0	0	nuclear chromosome segregation	N/A
Pfam	UHGV-1379792_45	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-1379792_45	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1379792_45	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
PHROG	UHGV-1379792_46	phrog_862	53.8	0.0000000000000033	N/A	unknown function
UniRef90	UHGV-1379792_46	UniRef90_A0A2P9FIG4	55.1	0.00000996	N/A	N/A
eggNOG-mapper	UHGV-1379792_46	1203606.HMPREF1526_00310	195.0	0	N/A	N/A
structural_annotation	UHGV-1379792_46	PF05037,COG2965	N/A	N/A	N/A	N/A
KOfam	UHGV-1379792_47	K06167	69.6	4.1e-20	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-1379792_47	phrog_392	186.2	0	metal-dependent hydrolase	other
UniRef90	UHGV-1379792_47	UniRef90_UPI00195A5026	303.0	0	MBL fold metallo-hydrolase	N/A
eggNOG-mapper	UHGV-1379792_47	1203606.HMPREF1526_00311	192.0	0	Metallo-beta-lactamase superfamily	N/A
Pfam	UHGV-1379792_47	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
dbAPIS	UHGV-1379792_47	APIS058	N/A	N/A	N/A	N/A
COG	UHGV-1379792_47	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-1379792_47	PF02112,MF_01818,NF041851,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-1379792_48	phrog_997	116.1	2e-34	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1379792_48	UniRef90_R6MCS9	107.0	1.6e-27	N/A	N/A
eggNOG-mapper	UHGV-1379792_48	1519439.JPJG01000059_gene1910	140.0	1.90002e-41	N/A	N/A
PHROG	UHGV-1379792_49	phrog_1029	245.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1379792_49	1203606.HMPREF1526_01890	260.0	0	N/A	N/A
structural_annotation	UHGV-1379792_49	PF10065,COG5532	N/A	N/A	N/A	N/A
PHROG	UHGV-1379792_50	phrog_2562	99.1	5.8e-29	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1379792_50	UniRef90_A0A1C6D5S6	266.0	0	N/A	N/A
eggNOG-mapper	UHGV-1379792_50	1235790.C805_00030	174.0	0	N/A	N/A
Pfam	UHGV-1379792_50	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-1379792_50	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1379792_51	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-1379792_53	K00558	219.1	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1379792_53	phrog_116	248.2	0	DNA methyltransferase	other
UniRef90	UHGV-1379792_53	UniRef90_H1CIV2	1000.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1379792_53	1121334.KB911073_gene1852	625.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-1379792_53	MTase_II_00020	87.6	1.2e-28	Type II methyltransferase	RM
Pfam	UHGV-1379792_53	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1379792_53	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1379792_53	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1379792_54	552398.HMPREF0866_03131	58.5	0.0000000000735	N/A	N/A
PHROG	UHGV-1379792_55	phrog_424	86.0	4.9e-25	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1379792_55	UniRef90_UPI0018774E0E	310.0	0	reductase	N/A
eggNOG-mapper	UHGV-1379792_55	1235835.C814_01169	300.0	0	N/A	N/A
COG	UHGV-1379792_55	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1379792_55	PF01507,NF006327	N/A	N/A	N/A	N/A
PHROG	UHGV-1379792_56	phrog_38832	71.1	9.6e-21	N/A	unknown function
eggNOG-mapper	UHGV-1379792_56	445972.ANACOL_00165	72.0	0.00000000000115	N/A	N/A
structural_annotation	UHGV-1379792_56	PF07073	N/A	N/A	N/A	N/A
PHROG	UHGV-1379792_57	phrog_1384	126.8	1.5e-37	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-1379792_57	665956.HMPREF1032_03086	262.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-1379792_57	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1379792_62	PF19070	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1379792_64	NF041677	N/A	N/A	N/A	N/A