UHGV-1379844 (vOTU-033976)

Viral Genome: UHGV-1379844

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1379844
vOTU ID	vOTU-033976
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0266034
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	69.12 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9812
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	29.05
Jumbo phage	No

Genome content
Genome length (bp)	39,515
GC content	37.01%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	59
CDS density	83%
Average CDS length (bps)	554.90
Total tRNA genes	2
Suppressor tRNA genes	1

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 69.12)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1379844_1	phrog_130	138.6	4.90006e-41	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1379844_1	UniRef90_A0A8D9PGL6	231.0	0	P22_AR protein	N/A
eggNOG-mapper	UHGV-1379844_1	996306.SSUR61_1007	139.0	8.19e-39	BRO family, N-terminal domain	N/A
Pfam	UHGV-1379844_1	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-1379844_1	COG3617	N/A	N/A	Prophage antirepressor	N/A
PHROG	UHGV-1379844_3	phrog_32192	77.6	1.2e-22	N/A	unknown function
UniRef90	UHGV-1379844_3	UniRef90_UPI001D0221FF	145.0	6.06762e-43	alanine-zipper protein	N/A
eggNOG-mapper	UHGV-1379844_3	397290.C810_05153	49.3	0.00000549	N/A	N/A
KOfam	UHGV-1379844_4	K18830	61.4	1.6e-17	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1379844_4	phrog_2967	57.6	1.8e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1379844_4	UniRef90_A0A1Q6LL24	141.0	8.39994e-41	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1379844_4	97138.C820_01960	110.0	1.77e-29	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-1379844_4	retron_type_VI_hth_cluster2_1	41.5	0.000000000025	N/A	Retron
Pfam	UHGV-1379844_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1379844_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1379844_4	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1379844_5	1234679.BN424_1825	52.4	0.00000735	N/A	N/A
structural_annotation	UHGV-1379844_5	PF03843,MF_01959,TIGR00752,COG3065	N/A	N/A	N/A	N/A
KOfam	UHGV-1379844_6	K07273	152.9	2.8026e-45	acm; lysozyme	N/A
PHROG	UHGV-1379844_6	phrog_291	144.4	9.40271e-43	endolysin	lysis
UniRef90	UHGV-1379844_6	UniRef90_A0A8D9UIP9	825.0	0	Lysozyme	N/A
eggNOG-mapper	UHGV-1379844_6	411470.RUMGNA_00451	199.0	0	COG COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase)	N/A
Pfam	UHGV-1379844_6	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1379844_6	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-1379844_6	PF01183,NF007404,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-1379844_8	phrog_2566	53.2	0.0000000000000042	N/A	unknown function
PHROG	UHGV-1379844_9	phrog_6616	134.8	4.60046e-42	tail protein	tail
UniRef90	UHGV-1379844_9	UniRef90_A0A8D9PGP3	1212.0	0	Minor structural protein	N/A
eggNOG-mapper	UHGV-1379844_9	1232453.BAIF02000058_gene1641	200.0	0	Phage minor structural protein	N/A
COG	UHGV-1379844_9	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1379844_9	PF16466,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1379844_10	phrog_1401	53.4	0.0000000000000042	N/A	unknown function
structural_annotation	UHGV-1379844_10	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-1379844_12	phrog_130	112.2	5.5e-33	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1379844_12	UniRef90_A0A8D9PG17	384.0	0	Prophage antirepressor	N/A
eggNOG-mapper	UHGV-1379844_12	658655.HMPREF0988_00912	248.0	0	Phage antirepressor protein KilAC domain	N/A
Pfam	UHGV-1379844_12	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1379844_12	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1379844_12	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1379844_12	PF03374,PF02498,COG3645	N/A	N/A	N/A	N/A
UniRef90	UHGV-1379844_14	UniRef90_A0A358PPW9	81.3	3.4e-19	CopG family transcriptional regulator	N/A
structural_annotation	UHGV-1379844_14	PF01402,NF041793,COG4453	N/A	N/A	N/A	N/A
UniRef90	UHGV-1379844_15	UniRef90_A0A8D9UIY0	341.0	0	N/A	N/A
eggNOG-mapper	UHGV-1379844_15	1121115.AXVN01000171_gene912	58.5	0.0000002	N/A	N/A
Pfam	UHGV-1379844_15	PF16729	N/A	N/A	N/A	DUF5067
structural_annotation	UHGV-1379844_15	PF16729,TIGR04087,COG3353	N/A	N/A	N/A	N/A
PHROG	UHGV-1379844_16	phrog_28918	157.1	0	N/A	unknown function
UniRef90	UHGV-1379844_16	UniRef90_A0A2H4J4V9	86.7	0.000000000000186	Putative Tmp	N/A
eggNOG-mapper	UHGV-1379844_16	1298920.KI911353_gene2649	311.0	0	tape measure	N/A
COG	UHGV-1379844_16	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-1379844_18	phrog_36112	69.3	4.1e-20	N/A	unknown function
UniRef90	UHGV-1379844_18	UniRef90_A0A8D9PG71	305.0	0	Tail assembly chaperone protein	N/A
eggNOG-mapper	UHGV-1379844_18	1298920.KI911353_gene2651	117.0	3.12e-31	N/A	N/A
structural_annotation	UHGV-1379844_18	PF16478	N/A	N/A	N/A	N/A
UniRef90	UHGV-1379844_19	UniRef90_A0A8D9PGN2	300.0	0	Major tail protein	N/A
structural_annotation	UHGV-1379844_19	PF16463,TIGR02126,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1379844_20	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1379844_21	1298920.KI911353_gene2654	182.0	0	N/A	N/A
AcrCatalog	UHGV-1379844_21	cluster_24841	86.7	2.18e-23	NA	N/A
eggNOG-mapper	UHGV-1379844_22	1298920.KI911353_gene2656	63.2	0.000000000138	N/A	N/A
structural_annotation	UHGV-1379844_22	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1379844_23	phrog_18218	139.6	8.39938e-42	N/A	unknown function
UniRef90	UHGV-1379844_23	UniRef90_A0A8D9PGR5	193.0	0	Holin	N/A
eggNOG-mapper	UHGV-1379844_23	411902.CLOBOL_03424	80.1	4.9e-18	N/A	N/A
structural_annotation	UHGV-1379844_23	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1379844_24	phrog_1863	53.3	0.000000000000002	N/A	unknown function
eggNOG-mapper	UHGV-1379844_24	1232452.BAIB02000007_gene1606	53.5	0.000000456	N/A	N/A
eggNOG-mapper	UHGV-1379844_25	397290.C810_01402	70.9	0.0000000000000352	N/A	N/A
UniRef90	UHGV-1379844_26	UniRef90_A0A8D9UIY7	172.0	0	Rho termination factor	N/A
structural_annotation	UHGV-1379844_26	PF21169	N/A	N/A	N/A	N/A
PHROG	UHGV-1379844_27	phrog_544	278.1	0	major head protein	head and packaging
UniRef90	UHGV-1379844_27	UniRef90_A0A8D9PGL1	642.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1379844_27	608534.GCWU000341_02293	332.0	0	N/A	N/A
NCBIFam	UHGV-1379844_27	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1379844_27	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1379844_29	phrog_64	136.8	1.2e-40	portal protein	head and packaging
UniRef90	UHGV-1379844_29	UniRef90_A0A8D9PG58	1059.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1379844_29	397290.C810_01397	461.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1379844_29	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1379844_29	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-1379844_30	UniRef90_A0A8D9UIR9	160.0	0	RimK-related lysine biosynthesis protein	N/A
PHROG	UHGV-1379844_31	phrog_36	66.0	6.4e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-1379844_31	UniRef90_A0A352SH29	85.9	2.82e-19	RNA polymerase subunit sigma-70 (Fragment)	N/A
eggNOG-mapper	UHGV-1379844_31	97138.C820_00772	68.9	0.000000000000581	sigma factor activity	N/A
Pfam	UHGV-1379844_31	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-1379844_31	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1379844_31	PF07374,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-1379844_32	phrog_38	155.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-1379844_32	UniRef90_A0A8D9PG33	1191.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1379844_32	1232453.BAIF02000058_gene1623	352.0	0	TIGRFAM Phage	N/A
COG	UHGV-1379844_32	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1379844_32	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1379844_34	PF10122,COG4416	N/A	N/A	N/A	N/A
UniRef90	UHGV-1379844_38	UniRef90_A0A8D9PGW1	131.0	7.69e-39	HTH psq-type domain-containing protein	N/A
structural_annotation	UHGV-1379844_38	PF05225,COG2886	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1379844_39	1397699.JNIS01000001_gene2447	107.0	7.22e-24	Conserved phage C-terminus (Phg_2220_C)	N/A
structural_annotation	UHGV-1379844_39	PF07106,NF040642,COG3355	N/A	N/A	N/A	N/A
PHROG	UHGV-1379844_40	phrog_236	102.2	9.4e-30	nucleotide kinase	other
UniRef90	UHGV-1379844_40	UniRef90_A0A8D9PGN7	260.0	0	Nucelotide kinase	N/A
eggNOG-mapper	UHGV-1379844_40	1123263.AUKY01000015_gene1590	85.5	2.54e-20	N/A	N/A
Pfam	UHGV-1379844_40	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-1379844_40	PF11753	N/A	N/A	N/A	N/A
PHROG	UHGV-1379844_41	phrog_229	115.7	3.8e-34	MazG-like pyrophosphatase	other
UniRef90	UHGV-1379844_41	UniRef90_A0A8D9PGJ8	242.0	0	MazG domain-containing protein	N/A
eggNOG-mapper	UHGV-1379844_41	428125.CLOLEP_01391	104.0	2.38e-27	MazG nucleotide pyrophosphohydrolase domain	N/A
Pfam	UHGV-1379844_41	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-1379844_41	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-1379844_41	PF03819,MF_01020,TIGR03188,COG1694	N/A	N/A	N/A	N/A
UniRef90	UHGV-1379844_42	UniRef90_A0A8D9UIS5	212.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1379844_42	658655.HMPREF0988_00895	142.0	1.73e-40	N/A	N/A
KOfam	UHGV-1379844_45	K07727	57.5	4e-16	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-1379844_45	UniRef90_A0A415M7P1	140.0	3.59994e-42	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1379844_45	411470.RUMGNA_00075	105.0	6.57e-29	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1379844_45	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1379844_45	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1379844_48	PF08207,MF_00085,NF003076,COG0231	N/A	N/A	N/A	N/A
KOfam	UHGV-1379844_51	K19090	137.4	1.10001e-40	cas5t; CRISPR-associated protein Cas5t	N/A
UniRef90	UHGV-1379844_51	UniRef90_UPI0015707911	138.0	7.32e-37	CRISPR-associated protein Cas5	N/A
eggNOG-mapper	UHGV-1379844_51	1123511.KB905865_gene1767	102.0	1.09e-23	CRISPR-associated protein Cas5	N/A
PADLOC	UHGV-1379844_51	cas_Cas5t	78.5	1.5e-22	CRISPR-associated protein Cas5, subtype I-B/TNEAP	CRISPR-CAS
COG	UHGV-1379844_51	COG1688	N/A	N/A	CRISPR/Cas system-associated protein Cas5, RAMP superfamily	N/A
structural_annotation	UHGV-1379844_51	PF09704,TIGR01895,COG1688	N/A	N/A	N/A	N/A
PHROG	UHGV-1379844_53	phrog_1233	62.3	8.4e-18	N/A	unknown function
UniRef90	UHGV-1379844_53	UniRef90_A0A345BPX6	87.8	2.11e-20	Metal-dependent hydrolase	N/A
eggNOG-mapper	UHGV-1379844_53	658655.HMPREF0988_00914	95.1	5.2e-24	N/A	N/A
Pfam	UHGV-1379844_53	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
KOfam	UHGV-1379844_54	K07741	58.7	2e-16	antB; anti-repressor protein	N/A
PHROG	UHGV-1379844_54	phrog_373	89.2	5.9e-26	anti-repressor	transcription regulation
UniRef90	UHGV-1379844_54	UniRef90_A0A292SST5	541.0	0	AntA domain-containing protein	N/A
eggNOG-mapper	UHGV-1379844_54	397290.C810_01343	283.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-1379844_54	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
COG	UHGV-1379844_54	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-1379844_54	PF08346,TIGR02681,COG3561	N/A	N/A	N/A	N/A
UniRef90	UHGV-1379844_56	UniRef90_A0A292SSH8	112.0	1.01e-31	CopG family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1379844_56	469604.HMPREF0946_00961	64.3	0.000000000000296	N/A	N/A
structural_annotation	UHGV-1379844_56	PF12651,NF041793,COG4710	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1379844_57	658655.HMPREF0988_00915	108.0	1.84e-26	N/A	N/A
PHROG	UHGV-1379844_58	phrog_20016	226.5	0	N/A	unknown function
UniRef90	UHGV-1379844_58	UniRef90_A0A285PT46	161.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1379844_58	397290.C810_05214	230.0	0	N/A	N/A
structural_annotation	UHGV-1379844_58	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1379844_59	phrog_16490	147.4	3.22299e-44	N/A	unknown function
eggNOG-mapper	UHGV-1379844_59	397290.C810_01328	172.0	0	N/A	N/A