UHGV-1381193 (vOTU-058085)

Viral Genome: UHGV-1381193

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1381193
vOTU ID	vOTU-058085
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0286198
Associated BioSample	SAMN02334043
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.981
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	27.27
Jumbo phage	No

Genome content
Genome length (bp)	43,349
GC content	50.17%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	64
CDS density	94%
Average CDS length (bps)	635.11
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1381193_2	K01449	51.2	0.000000000000017	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1381193_2	phrog_30550	139.1	2.4e-41	N/A	unknown function
UniRef90	UHGV-1381193_2	UniRef90_R6CIF0	130.0	1.84e-35	Hydrolase_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1381193_2	1519439.JPJG01000077_gene920	113.0	3.3e-30	Cell Wall Hydrolase	N/A
Pfam	UHGV-1381193_2	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
structural_annotation	UHGV-1381193_2	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A
KOfam	UHGV-1381193_3	K00390	104.5	6.1e-31	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1381193_3	phrog_424	120.0	1.6e-35	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1381193_3	UniRef90_UPI00189C945C	350.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1381193_3	1235792.C808_04967	325.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
PADLOC	UHGV-1381193_3	BrxP_00001	75.8	1.1e-22	BrxP	BREX
Pfam	UHGV-1381193_3	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1381193_3	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1381193_3	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
COG	UHGV-1381193_4	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-1381193_6	phrog_38832	41.8	0.00000000000045	N/A	unknown function
eggNOG-mapper	UHGV-1381193_6	1232443.BAIA02000078_gene48	58.5	0.00000000211	N/A	N/A
Pfam	UHGV-1381193_7	PF00569	N/A	N/A	Zinc finger, ZZ type	ZZ
PHROG	UHGV-1381193_9	phrog_2164	47.2	0.00000000000034	N/A	unknown function
PHROG	UHGV-1381193_14	phrog_18716	143.8	3.89561e-43	N/A	unknown function
UniRef90	UHGV-1381193_14	UniRef90_A0A1J0GJP7	144.0	1.5106e-42	N/A	N/A
eggNOG-mapper	UHGV-1381193_14	665959.HMPREF1013_00856	113.0	7.24e-31	N/A	N/A
Pfam	UHGV-1381193_14	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-1381193_14	PF18909	N/A	N/A	N/A	N/A
PHROG	UHGV-1381193_17	phrog_4973	55.0	0.0000000000000013	N/A	unknown function
UniRef90	UHGV-1381193_17	UniRef90_A0A3D3Y0P8	73.6	0.00000000000000131	DNA-binding protein	N/A
Pfam	UHGV-1381193_17	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-1381193_17	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
UniRef90	UHGV-1381193_18	UniRef90_A0A3C0NNN3	58.2	0.000000162	HTH psq-type domain-containing protein	N/A
KOfam	UHGV-1381193_19	K06909	120.4	2e-35	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1381193_19	phrog_979	134.2	4.30002e-41	terminase large subunit	head and packaging
UniRef90	UHGV-1381193_19	UniRef90_A0A3C0NMI6	599.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-1381193_19	1410650.JHWL01000003_gene2834	525.0	0	N/A	N/A
Pfam	UHGV-1381193_19	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-1381193_19	TIGR01445.1	N/A	N/A	intein N-terminal splicing region	N/A
COG	UHGV-1381193_19	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1381193_19	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1381193_20	phrog_15471	120.7	1.1e-35	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1381193_20	UniRef90_A0A396QEH1	185.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1381193_20	1235800.C819_00490	119.0	2.71e-31	HNH endonuclease	N/A
Pfam	UHGV-1381193_20	PF13392	N/A	N/A	HNH endonuclease	HNH_3
PHROG	UHGV-1381193_21	phrog_28563	49.1	0.000000000000077	N/A	unknown function
UniRef90	UHGV-1381193_21	UniRef90_A0A7G9GB56	96.3	1.79e-24	INTEIN_C_TER domain-containing protein	N/A
NCBIFam	UHGV-1381193_21	TIGR01443.1	N/A	N/A	intein C-terminal splicing region	N/A
COG	UHGV-1381193_21	COG0587	N/A	N/A	DNA polymerase III, alpha subunit	N/A
PHROG	UHGV-1381193_22	phrog_156	295.0	0	portal protein	head and packaging
eggNOG-mapper	UHGV-1381193_22	1410650.JHWL01000003_gene2833	495.0	0	N/A	N/A
structural_annotation	UHGV-1381193_22	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-1381193_23	K07584	59.5	6.6e-17	N/A	N/A
PHROG	UHGV-1381193_23	phrog_4478	64.2	1.5e-18	peptidase	other
UniRef90	UHGV-1381193_23	UniRef90_A0A6N9P4C8	54.3	0.000000339	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-1381193_23	1123009.AUID01000013_gene1737	48.9	0.00000761	Cysteine protease Prp	N/A
Pfam	UHGV-1381193_23	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-1381193_23	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1381193_23	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-1381193_24	phrog_13908	175.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1381193_24	1410650.JHWL01000003_gene2831	95.9	9.12e-20	N/A	N/A
PHROG	UHGV-1381193_25	phrog_1357	199.2	0	major head protein	head and packaging
UniRef90	UHGV-1381193_25	UniRef90_A0A2V2CFL5	535.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1381193_25	1410650.JHWL01000003_gene2830	264.0	0	N/A	N/A
NCBIFam	UHGV-1381193_25	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1381193_25	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1381193_26	phrog_15239	40.5	0.000000000044	N/A	unknown function
PHROG	UHGV-1381193_27	phrog_12105	107.6	8.5e-32	N/A	unknown function
eggNOG-mapper	UHGV-1381193_27	1519439.JPJG01000060_gene1891	67.0	0.00000000000151	N/A	N/A
PHROG	UHGV-1381193_28	phrog_511	233.6	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1381193_28	1410650.JHWL01000003_gene2827	255.0	0	N/A	N/A
structural_annotation	UHGV-1381193_28	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-1381193_29	phrog_24267	87.5	1.8e-25	N/A	unknown function
UniRef90	UHGV-1381193_29	UniRef90_A2HGS9	64.3	0.00000000746	Tail fiber protein, putative	N/A
eggNOG-mapper	UHGV-1381193_29	1042156.CXIVA_07170	103.0	5.41e-22	tail collar domain protein	N/A
COG	UHGV-1381193_29	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1381193_29	COG4675	N/A	N/A	N/A	N/A
UniRef90	UHGV-1381193_30	UniRef90_R7AZF7	117.0	7.19e-26	N/A	N/A
eggNOG-mapper	UHGV-1381193_30	1410650.JHWL01000003_gene2815	116.0	5.06e-26	N/A	N/A
PHROG	UHGV-1381193_31	phrog_22978	466.6	0	N/A	unknown function
UniRef90	UHGV-1381193_31	UniRef90_R5G452	378.0	0	PBECR5 domain-containing protein	N/A
eggNOG-mapper	UHGV-1381193_31	1410650.JHWL01000003_gene2814	315.0	0	N/A	N/A
eggNOG-mapper	UHGV-1381193_32	1007096.BAGW01000031_gene143	58.2	0.00000127	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-1381193_32	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
PHROG	UHGV-1381193_33	phrog_37900	231.0	0	N/A	unknown function
UniRef90	UHGV-1381193_33	UniRef90_UPI00110725F0	364.0	0	N/A	N/A
eggNOG-mapper	UHGV-1381193_33	552398.HMPREF0866_03098	197.0	0	N/A	N/A
Pfam	UHGV-1381193_33	PF07523	N/A	N/A	Bacterial Ig-like domain (group 3)	Big_3
Pfam	UHGV-1381193_33	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1381193_33	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1381193_33	PF19190,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
UniRef90	UHGV-1381193_35	UniRef90_R6I1X1	189.0	0	COPII coat assembly protein SEC16 (Protein transport protein SEC16)	N/A
eggNOG-mapper	UHGV-1381193_35	552398.HMPREF0866_01159	106.0	2.6e-27	N/A	N/A
PHROG	UHGV-1381193_36	phrog_21357	57.7	1.2e-16	endolysin	lysis
UniRef90	UHGV-1381193_36	UniRef90_UPI001BB47323	96.7	1.01e-20	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-1381193_36	411462.DORLON_01769	65.1	0.00000000299	Lysozyme-like	N/A
Pfam	UHGV-1381193_36	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-1381193_36	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
structural_annotation	UHGV-1381193_36	PF10030,TIGR02594,COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-1381193_37	phrog_1863	64.7	8.8e-19	N/A	unknown function
eggNOG-mapper	UHGV-1381193_37	748224.HMPREF9436_01412	94.7	1.03e-24	N/A	N/A
PHROG	UHGV-1381193_38	phrog_10091	107.9	7.1e-32	holin	lysis
UniRef90	UHGV-1381193_38	UniRef90_D7GNX3	130.0	5.63e-38	Holin, phage phi LC3 family	N/A
eggNOG-mapper	UHGV-1381193_38	445975.COLSTE_02144	114.0	4.54e-32	Bacteriophage holin	N/A
Pfam	UHGV-1381193_38	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1381193_38	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1381193_38	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1381193_38	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1381193_39	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1381193_40	phrog_3754	99.9	2.3e-29	N/A	unknown function
eggNOG-mapper	UHGV-1381193_40	476272.RUMHYD_01764	146.0	7.42688e-44	N/A	N/A
PHROG	UHGV-1381193_41	phrog_21718	93.0	3.1e-27	N/A	unknown function
eggNOG-mapper	UHGV-1381193_41	397290.C810_05210	94.4	1.09e-22	N/A	N/A
PHROG	UHGV-1381193_42	phrog_22984	76.8	2.3e-22	N/A	unknown function
PHROG	UHGV-1381193_43	phrog_16490	158.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1381193_43	1408437.JNJN01000043_gene803	141.0	1.38e-38	N/A	N/A
PHROG	UHGV-1381193_45	phrog_20016	191.1	0	N/A	unknown function
UniRef90	UHGV-1381193_45	UniRef90_A0A285PT46	201.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1381193_45	1226322.HMPREF1545_00077	168.0	0	N/A	N/A
structural_annotation	UHGV-1381193_45	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1381193_46	PF12510	N/A	N/A	N/A	N/A
KOfam	UHGV-1381193_47	K14059	209.2	0	int; integrase	N/A
PHROG	UHGV-1381193_47	phrog_1	205.2	0	integrase	integration and excision
UniRef90	UHGV-1381193_47	UniRef90_UPI0008345DF0	241.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1381193_47	1203606.HMPREF1526_00215	187.0	0	Phage integrase family	N/A
Pfam	UHGV-1381193_47	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1381193_47	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1381193_47	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1381193_47	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1381193_48	1382304.JNIL01000001_gene3508	50.1	0.00000712	Helix-turn-helix XRE-family like proteins	N/A
COG	UHGV-1381193_48	COG3620	N/A	N/A	Predicted transcriptional regulator, contains an XRE-type HTH domain (archaeal members contain CBS pair)	N/A
structural_annotation	UHGV-1381193_48	PF13443,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1381193_51	UniRef90_A0A8D9PDV2	55.8	0.0000000137	DNA methyl phosphotriester repair domain protein	N/A
eggNOG-mapper	UHGV-1381193_51	1392493.JIAB01000001_gene1404	62.4	0.00000000011	repeat protein	N/A
COG	UHGV-1381193_51	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
UniRef90	UHGV-1381193_54	UniRef90_A0A1V0QCF9	85.5	1.08e-18	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1381193_54	1226322.HMPREF1545_00148	72.8	0.0000000000000194	Transcriptional	N/A
Pfam	UHGV-1381193_54	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1381193_54	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
UniRef90	UHGV-1381193_55	UniRef90_UPI0018995761	69.3	0.0000000000000473	helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-1381193_55	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1381193_55	PF10078,NF040507,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1381193_56	PF12728	N/A	N/A	N/A	N/A
PHROG	UHGV-1381193_57	phrog_253	104.2	1.2e-30	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1381193_57	UniRef90_A0A1C5N4H2	105.0	7.47e-26	Siphovirus Gp157	N/A
eggNOG-mapper	UHGV-1381193_57	1410670.JHXF01000015_gene2268	93.2	6.6e-22	Siphovirus Gp157	N/A
Pfam	UHGV-1381193_57	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1381193_57	PF05565	N/A	N/A	N/A	N/A
PHROG	UHGV-1381193_58	phrog_7838	123.2	2.2e-36	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1381193_58	UniRef90_A0A8D9UGW3	187.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-1381193_58	742767.HMPREF9456_02052	156.0	4.2039e-45	N/A	N/A
structural_annotation	UHGV-1381193_58	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
PHROG	UHGV-1381193_59	phrog_72	47.5	0.00000000000014	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1381193_59	UniRef90_A0A2Z4Q9W9	107.0	3.32e-26	NinB	N/A
eggNOG-mapper	UHGV-1381193_59	445972.ANACOL_01825	77.8	0.00000000000000118	N/A	N/A
structural_annotation	UHGV-1381193_59	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-1381193_60	phrog_7566	88.2	5.8e-26	N/A	unknown function
eggNOG-mapper	UHGV-1381193_60	508419.F8J187_9CAUD	98.2	1.25e-25	N/A	N/A
KOfam	UHGV-1381193_61	K03111	119.0	6.2e-35	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1381193_61	phrog_44	121.5	7.7e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1381193_61	UniRef90_R6IDK3	149.0	1.13505e-43	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1381193_61	877414.ATWA01000008_gene232	131.0	3.83e-37	Single-strand binding protein family	N/A
Pfam	UHGV-1381193_61	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1381193_61	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1381193_61	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1381193_61	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1381193_61	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1381193_62	phrog_59	119.4	1.8e-35	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1381193_62	UniRef90_UPI001EFA3BC2	144.0	2.21999e-40	NUMOD4 motif-containing HNH endonuclease	N/A
eggNOG-mapper	UHGV-1381193_62	945021.TEH_18310	140.0	5.66e-40	NUMOD4 motif	N/A
PADLOC	UHGV-1381193_62	HEase_00016	101.0	2.5e-31	homing endonuclease	RM
Pfam	UHGV-1381193_62	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-1381193_62	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-1381193_62	PF13392,PF20987	N/A	N/A	N/A	N/A
PHROG	UHGV-1381193_63	phrog_16304	60.4	2.8e-17	N/A	unknown function
UniRef90	UHGV-1381193_63	UniRef90_A0A316T7M6	105.0	2.2e-24	N/A	N/A
eggNOG-mapper	UHGV-1381193_63	1345695.CLSA_c35700	57.0	0.00000129	DnaD domain protein	N/A
Pfam	UHGV-1381193_63	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-1381193_63	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1381193_63	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-1381193_64	phrog_14105	49.3	0.000000000000059	N/A	unknown function
eggNOG-mapper	UHGV-1381193_64	268407.PWYN_12330	60.8	0.0000000077	dextransucrase activity	N/A
COG	UHGV-1381193_64	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A