UHGV-1381698 (vOTU-034008)

Viral Genome: UHGV-1381698

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1381698
vOTU ID	vOTU-034008
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0172278
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	58.58 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9799
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	39.98
Jumbo phage	No

Genome content
Genome length (bp)	23,515
GC content	40.85%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	31
CDS density	94%
Average CDS length (bps)	715.07
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 58.58)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1381698_1	1035189.HMPREF9954_1937	214.0	0	Belongs to the peptidase S14 family	N/A
COG	UHGV-1381698_1	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
PHROG	UHGV-1381698_2	phrog_10	123.2	2.6e-36	major head protein	head and packaging
UniRef90	UHGV-1381698_2	UniRef90_A0A6I1TX70	673.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1381698_2	1035189.HMPREF9954_1936	684.0	0	Phage capsid family	N/A
Pfam	UHGV-1381698_2	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1381698_2	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1381698_2	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1381698_2	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1381698_3	phrog_749	109.3	1.6e-32	N/A	unknown function
UniRef90	UHGV-1381698_3	UniRef90_UPI001CBB9ADC	167.0	0	phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-1381698_3	888049.HMPREF8578_0263	175.0	0	N/A	N/A
structural_annotation	UHGV-1381698_3	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1381698_4	phrog_933	61.8	8.6e-18	N/A	unknown function
UniRef90	UHGV-1381698_5	UniRef90_A0A6I1TUW4	249.0	0	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-1381698_5	888049.HMPREF8578_0262	226.0	0	N/A	N/A
structural_annotation	UHGV-1381698_5	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-1381698_6	UniRef90_A0A139RIK3	143.0	1.26005e-41	N/A	N/A
eggNOG-mapper	UHGV-1381698_6	1336234.JAGN01000004_gene522	82.0	3.56e-18	N/A	N/A
structural_annotation	UHGV-1381698_6	PF04883,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1381698_7	phrog_78	89.7	3e-26	tail terminator	connector
UniRef90	UHGV-1381698_7	UniRef90_A0A139RIS6	209.0	0	Putative phage protein	N/A
eggNOG-mapper	UHGV-1381698_7	1035189.HMPREF9954_1931	211.0	0	N/A	N/A
structural_annotation	UHGV-1381698_7	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1381698_8	phrog_88	135.8	2.5e-40	major tail protein	tail
UniRef90	UHGV-1381698_8	UniRef90_A0A1X1IKK5	355.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1381698_8	1035189.HMPREF9954_1930	344.0	0	Phage tail tube protein	N/A
Pfam	UHGV-1381698_8	PF04630	N/A	N/A	Phage tail tube protein	Phage_TTP_1
NCBIFam	UHGV-1381698_8	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1381698_8	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1381698_9	phrog_187	52.7	0.000000000000008	head-tail adaptor	connector
UniRef90	UHGV-1381698_9	UniRef90_A0A139NGQ9	135.0	2.32e-39	Putative phage protein	N/A
PHROG	UHGV-1381698_10	phrog_10068	62.9	3.7e-18	N/A	unknown function
PHROG	UHGV-1381698_11	phrog_7687	104.6	5.9e-31	N/A	unknown function
PHROG	UHGV-1381698_12	phrog_1293	1495.1	0	tail length tape measure protein	tail
UniRef90	UHGV-1381698_12	UniRef90_A0A1X1FZU9	1914.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1381698_12	1054460.SPPN_00445	1600.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1381698_12	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1381698_12	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1381698_12	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1381698_12	PF10145,TIGR01760	N/A	N/A	N/A	N/A
PHROG	UHGV-1381698_13	phrog_33	74.3	2.8e-21	distal tail protein Dit	tail
UniRef90	UHGV-1381698_13	UniRef90_A0A139RIM3	439.0	0	Phage-associated protein	N/A
eggNOG-mapper	UHGV-1381698_13	768726.HMPREF9178_1053	375.0	0	N/A	N/A
COG	UHGV-1381698_13	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1381698_13	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1381698_14	phrog_2270	791.3	0	N/A	unknown function
UniRef90	UHGV-1381698_14	UniRef90_A0A7X9R0S6	2004.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1381698_14	768726.HMPREF9178_1052	1707.0	0	N/A	N/A
Pfam	UHGV-1381698_14	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-1381698_14	PF02018	N/A	N/A	Carbohydrate binding domain	CBM_4_9
Pfam	UHGV-1381698_14	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
NCBIFam	UHGV-1381698_14	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1381698_14	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1381698_14	PF14594,PF21582,TIGR01665,NF033675,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1381698_15	phrog_12683	103.4	1.2e-30	N/A	unknown function
UniRef90	UHGV-1381698_15	UniRef90_A0A081R6K4	59.3	0.000000000369	ATP synthase F0 sector subunit C	N/A
eggNOG-mapper	UHGV-1381698_15	1000588.HMPREF9965_1688	58.2	0.000000000177	N/A	N/A
PHROG	UHGV-1381698_16	phrog_1554	247.4	0	N/A	unknown function
eggNOG-mapper	UHGV-1381698_16	1095737.HMPREF1110_1749	357.0	0	N/A	N/A
structural_annotation	UHGV-1381698_16	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1381698_17	phrog_4257	144.5	3.9937e-43	N/A	unknown function
UniRef90	UHGV-1381698_17	UniRef90_A0A139QI86	153.0	1.4013e-45	N/A	N/A
eggNOG-mapper	UHGV-1381698_17	1095737.HMPREF1110_1750	221.0	0	N/A	N/A
PHROG	UHGV-1381698_18	phrog_608	141.9	1.80067e-42	holin	lysis
UniRef90	UHGV-1381698_18	UniRef90_I0T448	175.0	0	Phage holin, LL-H family	N/A
eggNOG-mapper	UHGV-1381698_18	936580.HMPREF1516_0703	179.0	0	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1381698_18	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
NCBIFam	UHGV-1381698_18	TIGR01673.1	N/A	N/A	phage holin	N/A
PHROG	UHGV-1381698_19	phrog_998	332.5	0	endolysin	lysis
UniRef90	UHGV-1381698_19	UniRef90_A0A1X0WMG3	528.0	0	Lysin	N/A
eggNOG-mapper	UHGV-1381698_19	157924.Q9AF60_9CAUD	493.0	0	Bacteriophage peptidoglycan hydrolase	N/A
Pfam	UHGV-1381698_19	PF05382	N/A	N/A	Bacteriophage peptidoglycan hydrolase	Amidase_5
Pfam	UHGV-1381698_19	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
structural_annotation	UHGV-1381698_19	PF19127,PF05382,TIGR04035,NF008096,COG5263,COG3942	N/A	N/A	N/A	N/A
KOfam	UHGV-1381698_20	K14059	178.1	0	int; integrase	N/A
PHROG	UHGV-1381698_20	phrog_1	194.4	0	integrase	integration and excision
UniRef90	UHGV-1381698_20	UniRef90_A0A4D6AVC8	705.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1381698_20	12402.Q708S2_9CAUD	716.0	0	Phage integrase family	N/A
Pfam	UHGV-1381698_20	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1381698_20	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
structural_annotation	UHGV-1381698_20	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1381698_21	phrog_2158	243.9	0	abortive infection resistance protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1381698_21	UniRef90_A0A0T8EK36	624.0	0	Abortive infection bacteriophage resistance protein	N/A
eggNOG-mapper	UHGV-1381698_21	1123315.AUIP01000014_gene1920	415.0	0	Abi-like protein	N/A
PADLOC	UHGV-1381698_21	AbiD	151.8	9.80909e-45	AbiD	Abi
Pfam	UHGV-1381698_21	PF07751	N/A	N/A	Abi-like protein	Abi_2
COG	UHGV-1381698_21	COG4823	N/A	N/A	Abortive infection bacteriophage resistance protein	N/A
structural_annotation	UHGV-1381698_21	PF07751,COG4823	N/A	N/A	N/A	N/A
KOfam	UHGV-1381698_22	K02342	162.1	0	dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]	N/A
PHROG	UHGV-1381698_22	phrog_192	171.4	0	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1381698_22	UniRef90_A0A098APY9	579.0	0	Exonuclease	N/A
eggNOG-mapper	UHGV-1381698_22	1266845.Q783_01865	259.0	0	DNA polymerase III	N/A
PADLOC	UHGV-1381698_22	cd06127	104.2	2.2e-30	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; associated	CRISPR-CAS
Pfam	UHGV-1381698_22	PF00929	N/A	N/A	Exonuclease	RNase_T
Pfam	UHGV-1381698_22	PF00533	N/A	N/A	BRCA1 C Terminus (BRCT) domain	BRCT
NCBIFam	UHGV-1381698_22	TIGR00573.1	N/A	N/A	exonuclease, DNA polymerase III, epsilon subunit family	N/A
COG	UHGV-1381698_22	COG0847	N/A	N/A	DNA polymerase III, epsilon subunit or related 3'-5' exonuclease	N/A
structural_annotation	UHGV-1381698_22	PF00929,PF00533,MF_00157,NF005289,COG0847	N/A	N/A	N/A	N/A
PHROG	UHGV-1381698_23	phrog_87	76.8	2.4e-22	metallo-protease	other
UniRef90	UHGV-1381698_23	UniRef90_A0A0E9GZ75	236.0	0	N/A	N/A
eggNOG-mapper	UHGV-1381698_23	1035189.HMPREF9954_1970	132.0	5.38e-38	IrrE N-terminal-like domain	N/A
Pfam	UHGV-1381698_23	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1381698_23	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1381698_23	PF13058,MF_00745,NF003339,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-1381698_24	K22299	43.0	0.0000000000092	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1381698_24	phrog_8	84.9	1.3e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-1381698_24	UniRef90_A0A1X1L1L5	240.0	0	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-1381698_24	1282664.H354_07515	240.0	0	sequence-specific DNA binding	N/A
Pfam	UHGV-1381698_24	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1381698_24	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1381698_24	PF12844,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1381698_25	phrog_1468	93.5	8.1e-28	transcriptional repressor	transcription regulation
UniRef90	UHGV-1381698_25	UniRef90_E6KKA4	125.0	1.3e-36	HTH cro/C1-type domain-containing protein	N/A
COG	UHGV-1381698_25	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
PHROG	UHGV-1381698_26	phrog_8322	94.0	4.8e-28	N/A	unknown function
PHROG	UHGV-1381698_27	phrog_3168	161.2	0	N/A	unknown function
UniRef90	UHGV-1381698_27	UniRef90_Q7Y4L5	125.0	2.28e-36	Gp9	N/A
PHROG	UHGV-1381698_28	phrog_9949	126.2	7e-38	N/A	unknown function
AcrCatalog	UHGV-1381698_28	cluster_10982	110.0	2.44e-35	NA	N/A
KOfam	UHGV-1381698_29	K07741	221.4	0	antB; anti-repressor protein	N/A
PHROG	UHGV-1381698_29	phrog_63	199.1	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1381698_29	UniRef90_A0A1E8UD67	445.0	0	Oxidoreductase	N/A
eggNOG-mapper	UHGV-1381698_29	768726.HMPREF9178_1088	422.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-1381698_29	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-1381698_29	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1381698_29	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-1381698_29	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A