UHGV-1382151 (vOTU-003807)

Viral Genome: UHGV-1382151

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1382151
vOTU ID	vOTU-003807
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0285357
Associated BioSample	SAMN00148398
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9787
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	36.3
Jumbo phage	No

Genome content
Genome length (bp)	43,145
GC content	32.27%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	70
CDS density	92%
Average CDS length (bps)	565.16
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1382151_1	phrog_24451	76.8	2.3e-22	N/A	unknown function
UniRef90	UHGV-1382151_1	UniRef90_A0A3P6KYQ0	92.0	6.49e-21	N/A	N/A
eggNOG-mapper	UHGV-1382151_1	931276.Cspa_c07590	72.8	0.0000000000000169	N/A	N/A
Pfam	UHGV-1382151_2	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
NCBIFam	UHGV-1382151_2	TIGR01669.1	N/A	N/A	XkdX family protein	N/A
structural_annotation	UHGV-1382151_2	PF09693,TIGR01669	N/A	N/A	N/A	N/A
PHROG	UHGV-1382151_4	phrog_9233	83.4	2.5e-24	holin	lysis
UniRef90	UHGV-1382151_4	UniRef90_A0A4Q7P349	118.0	1.51e-33	Dp-1 family holin	N/A
eggNOG-mapper	UHGV-1382151_4	742740.HMPREF9474_02251	115.0	3.21e-33	Putative phage holin Dp-1	N/A
Pfam	UHGV-1382151_4	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-1382151_4	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-1382151_5	phrog_14030	125.2	4.3e-37	N/A	unknown function
UniRef90	UHGV-1382151_5	UniRef90_A0A2A7MEX2	222.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-1382151_5	641107.CDLVIII_3774	219.0	0	Bacteriophage peptidoglycan hydrolase	N/A
Pfam	UHGV-1382151_5	PF05382	N/A	N/A	Bacteriophage peptidoglycan hydrolase	Amidase_5
Pfam	UHGV-1382151_5	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1382151_5	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1382151_5	PF05382,PF01471,NF038080,NF033742,COG3409,COG1388	N/A	N/A	N/A	N/A
KOfam	UHGV-1382151_7	K07813	47.7	0.00000000000016	agrB; accessory gene regulator B	N/A
Pfam	UHGV-1382151_7	PF04647	N/A	N/A	Accessory gene regulator B	AgrB
structural_annotation	UHGV-1382151_7	PF08281,NF001067,COG2739	N/A	N/A	N/A	N/A
UniRef90	UHGV-1382151_10	UniRef90_A0A8F0WFQ8	61.2	0.000000114	Outer capsid protein/viral fiber	N/A
eggNOG-mapper	UHGV-1382151_10	476272.RUMHYD_01770	91.7	5.25e-20	N/A	N/A
PHROG	UHGV-1382151_11	phrog_20016	67.4	1.6e-19	N/A	unknown function
UniRef90	UHGV-1382151_11	UniRef90_A0A395WF88	211.0	0	BclA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1382151_11	1235790.C805_00062	56.6	0.0000000325	N/A	N/A
Pfam	UHGV-1382151_11	PF18573	N/A	N/A	BclA C-terminal domain	BclA_C
structural_annotation	UHGV-1382151_11	PF18573,NF033147	N/A	N/A	N/A	N/A
UniRef90	UHGV-1382151_13	UniRef90_A0A7M1RRU0	83.2	8.03e-17	RNA polymerase sigma factor/ubiquitin-like protein	N/A
PHROG	UHGV-1382151_14	phrog_93	48.7	0.000000000000099	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1382151_14	UniRef90_A3DG80	76.6	9.69e-16	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1382151_14	203119.Cthe_1738	76.6	1.62e-16	VRR_NUC	N/A
COG	UHGV-1382151_14	COG1591	N/A	N/A	Holliday junction resolvase Hjc, archaeal type	N/A
structural_annotation	UHGV-1382151_14	PF08774,NF040854,COG3331	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1382151_15	PF05037,NF005674	N/A	N/A	N/A	N/A
PHROG	UHGV-1382151_16	phrog_434	95.6	3.6e-28	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1382151_16	UniRef90_A0A1C6L0E5	239.0	0	Putative phage-type endonuclease	N/A
eggNOG-mapper	UHGV-1382151_16	1121866.AUGK01000003_gene1405	224.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-1382151_16	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
COG	UHGV-1382151_16	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1382151_16	PF09588,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-1382151_17	phrog_355	52.4	0.0000000000000092	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1382151_17	UniRef90_UPI000E473058	92.8	2.13e-22	N/A	N/A
eggNOG-mapper	UHGV-1382151_17	411473.RUMCAL_00360	89.0	9.99e-22	N/A	N/A
structural_annotation	UHGV-1382151_17	PF14359,MF_03036,TIGR03646,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-1382151_18	phrog_1252	430.9	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1382151_18	UniRef90_R6MZ51	466.0	0	DNA polymerase elongation subunit (Family B)	N/A
eggNOG-mapper	UHGV-1382151_18	1121866.AUGK01000003_gene1403	392.0	0	DNA replication proofreading	N/A
COG	UHGV-1382151_18	COG0417	N/A	N/A	DNA polymerase B elongation subunit	N/A
structural_annotation	UHGV-1382151_18	PF04404,PF08490,MF_04100,TIGR00592,COG0417	N/A	N/A	N/A	N/A
Pfam	UHGV-1382151_19	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
COG	UHGV-1382151_19	COG3311	N/A	N/A	DNA-binding transcriptional regulator AlpA	N/A
structural_annotation	UHGV-1382151_21	PF17457	N/A	N/A	N/A	N/A
KOfam	UHGV-1382151_22	K14440	185.9	0	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-1382151_22	phrog_62	300.0	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1382151_22	UniRef90_A0A6G7WZZ8	431.0	0	DEAD/DEAH box helicase	N/A
eggNOG-mapper	UHGV-1382151_22	1219626.HMPREF1639_07295	357.0	0	SNF2 family N-terminal domain	N/A
PADLOC	UHGV-1382151_22	ZorD1_00007	116.2	3.1e-35	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-1382151_22	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-1382151_22	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-1382151_22	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-1382151_22	PF00176,PF00271,MF_01821,NF041790,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-1382151_23	phrog_99	106.2	3e-31	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1382151_23	UniRef90_A0A1G5EWE8	147.0	1.18001e-40	AP2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1382151_23	86416.Clopa_2526	115.0	7.22e-29	AP2 domain	N/A
structural_annotation	UHGV-1382151_23	PF00847,PF13392	N/A	N/A	N/A	N/A
UniRef90	UHGV-1382151_24	UniRef90_UPI001EE900B7	54.7	0.000000145	N/A	N/A
structural_annotation	UHGV-1382151_25	PF01104,NF041014	N/A	N/A	N/A	N/A
PHROG	UHGV-1382151_29	phrog_22529	85.4	4.5e-25	N/A	unknown function
UniRef90	UHGV-1382151_29	UniRef90_A0A3D3RIY2	100.0	4.97e-24	3D domain-containing protein	N/A
eggNOG-mapper	UHGV-1382151_29	457421.CBFG_00763	100.0	1.11e-23	3D domain protein	N/A
Pfam	UHGV-1382151_29	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-1382151_29	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
KOfam	UHGV-1382151_30	K00558	190.1	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1382151_30	phrog_116	214.2	0	DNA methyltransferase	other
UniRef90	UHGV-1382151_30	UniRef90_A0A1W7LPG6	256.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-1382151_30	1391647.AVSV01000003_gene1798	207.0	0	PFAM C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1382151_30	MTase_II_00058	231.7	0	Type II methyltransferase	RM
Pfam	UHGV-1382151_30	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1382151_30	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1382151_30	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1382151_30	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1382151_31	1232446.BAIE02000031_gene2713	84.3	1.74e-18	N/A	N/A
KOfam	UHGV-1382151_34	K06919	46.1	0.0000000000005	K06919; putative DNA primase/helicase	N/A
PHROG	UHGV-1382151_34	phrog_864	233.3	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1382151_34	UniRef90_A0A1M7S6C1	241.0	0	Putative DNA primase/helicase	N/A
eggNOG-mapper	UHGV-1382151_34	657322.FPR_09510	228.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-1382151_34	PF09250	N/A	N/A	Bifunctional DNA primase/polymerase, N-terminal	Prim-Pol
Pfam	UHGV-1382151_34	PF08708	N/A	N/A	Primase C terminal 1 (PriCT-1)	PriCT_1
Pfam	UHGV-1382151_34	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-1382151_34	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-1382151_34	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-1382151_34	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-1382151_34	PF05272,PF09250,PF08708,MF_00016,NF011296,COG5545	N/A	N/A	N/A	N/A
COG	UHGV-1382151_35	COG3311	N/A	N/A	DNA-binding transcriptional regulator AlpA	N/A
structural_annotation	UHGV-1382151_39	PF10571	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1382151_40	931276.Cspa_c57180	60.1	0.0000000206	DNA-packaging protein gp3	N/A
Pfam	UHGV-1382151_40	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1382151_40	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-1382151_49	phrog_1233	76.2	4.8e-22	N/A	unknown function
eggNOG-mapper	UHGV-1382151_49	476272.RUMHYD_01960	98.2	8.36e-25	N/A	N/A
PHROG	UHGV-1382151_53	phrog_38	168.5	0	terminase large subunit	head and packaging
eggNOG-mapper	UHGV-1382151_53	476272.RUMHYD_01940	338.0	0	TIGRFAM Phage	N/A
COG	UHGV-1382151_53	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1382151_53	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-1382151_54	phrog_64	197.5	0	portal protein	head and packaging
UniRef90	UHGV-1382151_54	UniRef90_UPI001BAB50B9	282.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1382151_54	1121866.AUGK01000003_gene1429	175.0	2.8026e-45	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1382151_54	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1382151_54	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1382151_56	phrog_1328	130.0	1.6e-38	major head protein	head and packaging
UniRef90	UHGV-1382151_56	UniRef90_UPI00164DD2D5	288.0	0	N/A	N/A
eggNOG-mapper	UHGV-1382151_56	398512.JQKC01000052_gene2672	216.0	0	N/A	N/A
Pfam	UHGV-1382151_56	PF17236	N/A	N/A	N/A	DUF5309
structural_annotation	UHGV-1382151_56	PF17236,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1382151_57	UniRef90_A0A3D4KY33	68.9	0.000000000000497	DNA-packaging protein	N/A
Pfam	UHGV-1382151_57	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1382151_58	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1382151_60	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1382151_61	1121333.JMLH01000047_gene1013	67.0	0.00000000000594	N/A	N/A
structural_annotation	UHGV-1382151_61	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1382151_62	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-1382151_64	phrog_1533	176.4	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1382151_64	1121866.AUGK01000003_gene1437	154.0	2.75e-35	phage tail tape measure protein	N/A
COG	UHGV-1382151_64	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-1382151_65	phrog_1194	64.9	1.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-1382151_65	742740.HMPREF9474_03515	110.0	2.09e-29	N/A	N/A
structural_annotation	UHGV-1382151_65	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1382151_66	phrog_13879	68.4	5.4e-32	N/A	unknown function
eggNOG-mapper	UHGV-1382151_66	1235800.C819_00474	104.0	3.22e-20	N/A	N/A
structural_annotation	UHGV-1382151_66	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1382151_67	phrog_18725	43.7	0.0000000000045	N/A	unknown function
eggNOG-mapper	UHGV-1382151_67	1298920.KI911353_gene4838	71.6	0.0000000000000442	N/A	N/A
COG	UHGV-1382151_68	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
PHROG	UHGV-1382151_70	phrog_314	75.1	1.3e-21	homing endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1382151_70	UniRef90_UPI000400761C	82.4	1.15e-16	GIY-YIG nuclease family protein	N/A
eggNOG-mapper	UHGV-1382151_70	476272.RUMHYD_01755	82.0	6.1e-17	GIY-YIG type nucleases (URI domain)	N/A
COG	UHGV-1382151_70	COG3860	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1382151_70	PF19835,PF07453,TIGR01453,COG2827	N/A	N/A	N/A	N/A