UHGV-1383009 (vOTU-002354)

Viral Genome: UHGV-1383009

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1383009
vOTU ID	vOTU-002354
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0289801
Associated BioSample	SAMN05827122
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9809
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	36.17
Jumbo phage	No

Genome content
Genome length (bp)	44,112
GC content	42.84%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	75
CDS density	87%
Average CDS length (bps)	512.72
Total tRNA genes	2
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1383009_1	411461.DORFOR_00721	47.8	0.000000837	N/A	N/A
KOfam	UHGV-1383009_2	K00571	170.4	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1383009_2	phrog_67	171.3	0	DNA methyltransferase	other
UniRef90	UHGV-1383009_2	UniRef90_A0A3M8B7W2	285.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1383009_2	755731.Clo1100_1145	253.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-1383009_2	MTase_II_00037	153.6	0	Type II methyltransferase	RM
Pfam	UHGV-1383009_2	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1383009_2	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1383009_2	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1383009_3	phrog_541	85.1	5.2e-25	head-tail adaptor	connector
eggNOG-mapper	UHGV-1383009_3	476272.RUMHYD_01778	122.0	3.1e-33	N/A	N/A
PHROG	UHGV-1383009_4	phrog_247	230.7	0	major head protein	head and packaging
UniRef90	UHGV-1383009_4	UniRef90_UPI001BA5448B	290.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-1383009_4	33035.JPJF01000106_gene3132	556.0	0	N/A	N/A
structural_annotation	UHGV-1383009_4	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1383009_5	UniRef90_UPI001C0EBA51	306.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1383009_5	742765.HMPREF9457_02126	69.7	0.00000000000616	COG NOG36366 non supervised orthologous group	N/A
structural_annotation	UHGV-1383009_7	PF00210,MF_01441,NF011597,COG1528	N/A	N/A	N/A	N/A
PHROG	UHGV-1383009_8	phrog_20016	75.3	5.9e-22	N/A	unknown function
UniRef90	UHGV-1383009_8	UniRef90_A0A316MV88	233.0	0	BclA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1383009_8	397290.C810_05214	67.0	0.00000000000364	N/A	N/A
structural_annotation	UHGV-1383009_8	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1383009_9	476272.RUMHYD_01770	85.1	2.36e-17	N/A	N/A
PHROG	UHGV-1383009_11	phrog_21718	72.4	7e-21	N/A	unknown function
eggNOG-mapper	UHGV-1383009_11	1235790.C805_00058	103.0	1.14e-25	N/A	N/A
UniRef90	UHGV-1383009_12	UniRef90_A0A417UWY7	129.0	1.1e-36	CTP synthase	N/A
eggNOG-mapper	UHGV-1383009_12	476272.RUMHYD_01766	62.4	0.0000000000335	N/A	N/A
PHROG	UHGV-1383009_13	phrog_581	250.3	0	minor head protein	head and packaging
UniRef90	UHGV-1383009_13	UniRef90_A0A1C6CDG2	541.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-1383009_13	33035.JPJF01000106_gene3134	398.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1383009_13	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1383009_13	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1383009_13	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1383009_14	phrog_14030	162.8	0	N/A	unknown function
UniRef90	UHGV-1383009_14	UniRef90_UPI001F3A7341	287.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1383009_14	742741.HMPREF9475_00446	236.0	0	N/A	N/A
structural_annotation	UHGV-1383009_14	PF18342,NF041850,COG3807	N/A	N/A	N/A	N/A
PHROG	UHGV-1383009_15	phrog_533	284.7	0	portal protein	head and packaging
UniRef90	UHGV-1383009_15	UniRef90_A0A1C6CDM8	711.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-1383009_15	33035.JPJF01000106_gene3135	530.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-1383009_15	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1383009_16	K06909	419.1	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1383009_16	phrog_3717	183.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1383009_16	UniRef90_A0A1C6CDG5	818.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-1383009_16	33035.JPJF01000106_gene3136	702.0	0	Terminase small subunit	N/A
Pfam	UHGV-1383009_16	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
Pfam	UHGV-1383009_16	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1383009_16	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1383009_16	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1383009_16	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1383009_16	PF04466,PF17288,PF03592,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1383009_20	phrog_2118	109.9	2.5e-32	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1383009_20	UniRef90_A0A3R6UQD9	171.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1383009_20	610130.Closa_0730	130.0	1.95e-37	HNH endonuclease	N/A
Pfam	UHGV-1383009_20	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1383009_20	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1383009_20	PF13395,TIGR02646,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-1383009_21	phrog_38832	44.8	0.0000000000017	N/A	unknown function
UniRef90	UHGV-1383009_21	UniRef90_A0A415TX35	79.7	1.95e-16	BAH domain-containing protein	N/A
UniRef90	UHGV-1383009_24	UniRef90_A0A415TX35	161.0	0	BAH domain-containing protein	N/A
PHROG	UHGV-1383009_26	phrog_8684	100.1	1.9e-29	N/A	unknown function
UniRef90	UHGV-1383009_26	UniRef90_A0A395X9H4	185.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-1383009_26	457412.RSAG_01162	183.0	0	YopX protein	N/A
Pfam	UHGV-1383009_26	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-1383009_26	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1383009_27	phrog_20593	41.7	0.0000000000054	N/A	unknown function
UniRef90	UHGV-1383009_31	UniRef90_A0A353MVX8	63.9	0.00000000000111	DNA methyltransferase (Fragment)	N/A
eggNOG-mapper	UHGV-1383009_31	742740.HMPREF9474_04317	70.5	0.0000000000000766	C-5 cytosine-specific DNA methylase	N/A
COG	UHGV-1383009_31	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
AcrCatalog	UHGV-1383009_33	cluster_11670	75.1	3.03e-20	NA	N/A
PHROG	UHGV-1383009_36	phrog_15768	112.1	1.19993e-41	N/A	unknown function
UniRef90	UHGV-1383009_36	UniRef90_R6RVQ1	198.0	0	Chromosome segregation ATPases	N/A
eggNOG-mapper	UHGV-1383009_36	343509.SG1178	75.5	0.00000000000033	N/A	N/A
AcrCatalog	UHGV-1383009_36	cluster_14472	165.0	0	NA	N/A
Pfam	UHGV-1383009_36	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-1383009_36	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-1383009_37	phrog_244	75.1	1.3e-21	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1383009_37	742740.HMPREF9474_03491	169.0	0	N/A	N/A
structural_annotation	UHGV-1383009_37	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-1383009_38	phrog_2113	63.2	3e-18	N/A	unknown function
structural_annotation	UHGV-1383009_38	PF01978,TIGR01610,COG3388	N/A	N/A	N/A	N/A
PHROG	UHGV-1383009_39	phrog_7566	96.2	1.9e-28	N/A	unknown function
UniRef90	UHGV-1383009_39	UniRef90_A0A2T3EXD0	173.0	0	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-1383009_39	1304866.K413DRAFT_1198	60.1	0.000000000184	N/A	N/A
PHROG	UHGV-1383009_40	phrog_72	64.6	1.3e-18	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1383009_40	1304866.K413DRAFT_1197	135.0	8.58e-38	N/A	N/A
structural_annotation	UHGV-1383009_40	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-1383009_41	phrog_14970	295.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1383009_41	411470.RUMGNA_02193	236.0	0	double-strand break repair protein	N/A
COG	UHGV-1383009_41	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
PHROG	UHGV-1383009_42	phrog_253	119.7	2.2e-35	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1383009_42	UniRef90_A0A1C6CBG4	195.0	0	Siphovirus Gp157	N/A
eggNOG-mapper	UHGV-1383009_42	411470.RUMGNA_02192	132.0	2.82e-37	Siphovirus Gp157	N/A
Pfam	UHGV-1383009_42	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1383009_42	PF05565	N/A	N/A	N/A	N/A
UniRef90	UHGV-1383009_44	UniRef90_UPI001BC23C38	78.2	9.56e-17	Nitrogenase molybdenum-iron protein subunit beta	N/A
PHROG	UHGV-1383009_45	phrog_5070	176.6	0	N/A	unknown function
UniRef90	UHGV-1383009_45	UniRef90_UPI001898F13F	124.0	3.32e-31	polymer-forming cytoskeletal protein	N/A
eggNOG-mapper	UHGV-1383009_45	768710.DesyoDRAFT_1067	108.0	2e-26	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	N/A
Pfam	UHGV-1383009_45	PF18836	N/A	N/A	YdcK Beta solenoid repeat	B_solenoid_ydck
COG	UHGV-1383009_45	COG1044	N/A	N/A	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	N/A
structural_annotation	UHGV-1383009_45	NF040481,COG2171	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-1383009_46	cluster_17974	102.0	6.19e-32	NA	N/A
structural_annotation	UHGV-1383009_48	PF21291,NF041951,COG1513	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1383009_49	COG1321	N/A	N/A	N/A	N/A
UniRef90	UHGV-1383009_52	UniRef90_A0A6N7WNE9	91.7	4.13e-23	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1383009_52	610130.Closa_1362	89.4	4.3e-23	Helix-turn-helix domain	N/A
Pfam	UHGV-1383009_52	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-1383009_52	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
structural_annotation	UHGV-1383009_52	PF12728,NF040990,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-1383009_53	phrog_8	43.2	0.0000000000083	transcriptional regulator	transcription regulation
UniRef90	UHGV-1383009_53	UniRef90_A0A7M2RFN8	111.0	4.24e-29	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1383009_53	610130.Closa_1361	97.8	1.73e-24	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1383009_53	PF07022	N/A	N/A	Bacteriophage CI repressor helix-turn-helix domain	Phage_CI_repr
COG	UHGV-1383009_53	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-1383009_53	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1383009_54	phrog_87	66.9	2.4e-19	metallo-protease	other
UniRef90	UHGV-1383009_54	UniRef90_A0A173TZ87	144.0	1.95005e-41	Metallopeptidase immA	N/A
eggNOG-mapper	UHGV-1383009_54	476272.RUMHYD_01733	108.0	5.36e-28	IrrE N-terminal-like domain	N/A
Pfam	UHGV-1383009_54	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1383009_54	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
UniRef90	UHGV-1383009_55	UniRef90_A0A412ELU3	68.9	0.000000000921	SHOCT domain-containing protein	N/A
eggNOG-mapper	UHGV-1383009_55	1449343.JQLQ01000002_gene1561	62.4	0.0000000133	N/A	N/A
Pfam	UHGV-1383009_55	PF09851	N/A	N/A	Short C-terminal domain	SHOCT
structural_annotation	UHGV-1383009_55	PF15947,PF14471	N/A	N/A	N/A	N/A
KOfam	UHGV-1383009_56	K14059	89.1	7.7e-26	int; integrase	N/A
PHROG	UHGV-1383009_56	phrog_1	94.4	1.6e-27	integrase	integration and excision
UniRef90	UHGV-1383009_56	UniRef90_A0A174XEY3	466.0	0	Integrase family protein	N/A
eggNOG-mapper	UHGV-1383009_56	478749.BRYFOR_05407	447.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1383009_56	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1383009_56	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1383009_56	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1383009_57	phrog_13890	48.6	0.000000000000093	N/A	unknown function
UniRef90	UHGV-1383009_57	UniRef90_A0A416MW54	114.0	4.93e-32	Arc family DNA-binding protein	N/A
eggNOG-mapper	UHGV-1383009_57	1235790.C805_00066	50.4	0.000000161	N/A	N/A
Pfam	UHGV-1383009_57	PF03869	N/A	N/A	Arc-like DNA binding domain	Arc
structural_annotation	UHGV-1383009_57	PF03869	N/A	N/A	N/A	N/A
COG	UHGV-1383009_61	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
structural_annotation	UHGV-1383009_61	PF07675,NF038128	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1383009_63	411902.CLOBOL_00122	125.0	1.09e-34	N/A	N/A
PHROG	UHGV-1383009_64	phrog_18725	57.1	3.5e-16	N/A	unknown function
eggNOG-mapper	UHGV-1383009_64	411902.CLOBOL_00123	123.0	3.41e-34	N/A	N/A
PHROG	UHGV-1383009_65	phrog_32744	165.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1383009_65	411902.CLOBOL_00124	456.0	0	N/A	N/A
structural_annotation	UHGV-1383009_65	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-1383009_66	phrog_1194	60.8	1.9e-17	N/A	unknown function
eggNOG-mapper	UHGV-1383009_66	411902.CLOBOL_00125	129.0	1.32e-36	N/A	N/A
structural_annotation	UHGV-1383009_66	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
KOfam	UHGV-1383009_67	K10421	45.7	0.00000000000049	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-1383009_67	phrog_37543	714.5	0	N/A	unknown function
UniRef90	UHGV-1383009_67	UniRef90_UPI001DBC5439	276.0	0	PspA/IM30 family protein	N/A
eggNOG-mapper	UHGV-1383009_67	411459.RUMOBE_01384	210.0	0	phage tail tape measure protein	N/A
COG	UHGV-1383009_67	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1383009_68	phrog_706	141.0	6.89999e-42	N/A	unknown function
UniRef90	UHGV-1383009_68	UniRef90_UPI00192502EA	201.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1383009_68	411902.CLOBOL_00127	193.0	0	N/A	N/A
Pfam	UHGV-1383009_68	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1383009_68	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1383009_69	phrog_11299	110.3	1.4e-32	N/A	unknown function
eggNOG-mapper	UHGV-1383009_69	411459.RUMOBE_01382	107.0	8.43e-28	N/A	N/A
structural_annotation	UHGV-1383009_69	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1383009_70	phrog_3099	117.7	8.8e-35	N/A	unknown function
eggNOG-mapper	UHGV-1383009_70	476272.RUMHYD_01782	148.0	4.97461e-43	N/A	N/A
structural_annotation	UHGV-1383009_70	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1383009_71	phrog_3266	94.3	9.7e-28	tail completion	connector
eggNOG-mapper	UHGV-1383009_71	476272.RUMHYD_01781	148.0	2.53635e-43	N/A	N/A
structural_annotation	UHGV-1383009_71	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1383009_72	phrog_556	59.4	5.8e-18	minor head protein	head and packaging
UniRef90	UHGV-1383009_72	UniRef90_UPI0008B4CFF0	207.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1383009_72	476272.RUMHYD_01780	161.0	0	N/A	N/A
structural_annotation	UHGV-1383009_72	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1383009_73	phrog_3366	104.9	6.5e-31	N/A	unknown function
eggNOG-mapper	UHGV-1383009_73	476272.RUMHYD_01779	147.0	2.28412e-43	N/A	N/A
structural_annotation	UHGV-1383009_73	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1383009_74	phrog_18218	134.2	3.8e-40	N/A	unknown function
UniRef90	UHGV-1383009_74	UniRef90_A0A8D9PGR5	148.0	3.36312e-44	Holin	N/A
eggNOG-mapper	UHGV-1383009_74	411902.CLOBOL_03424	76.6	1.12e-16	N/A	N/A
structural_annotation	UHGV-1383009_74	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1383009_75	phrog_419	100.3	2.2e-29	N/A	unknown function
UniRef90	UHGV-1383009_75	UniRef90_A0A4U9RIR3	120.0	9.48e-34	N/A	N/A
eggNOG-mapper	UHGV-1383009_75	476272.RUMHYD_03324	124.0	8.3e-36	N/A	N/A
structural_annotation	UHGV-1383009_75	PF14083	N/A	N/A	N/A	N/A