UHGV-1383075 (vOTU-077633)

Viral Genome: UHGV-1383075

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1383075
vOTU ID	vOTU-077633
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0274630
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	96.73 (High-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.977
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	23.75
Jumbo phage	No

Genome content
Genome length (bp)	41,156
GC content	39.00%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	70
CDS density	92%
Average CDS length (bps)	543.34
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 96.73)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1383075_2	97139.C824_00043	58.2	0.000000000976	N/A	N/A
PHROG	UHGV-1383075_3	phrog_7245	116.1	1.3e-34	anti-restriction protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1383075_3	UniRef90_A0A845QZZ2	140.0	4.62e-34	N/A	N/A
eggNOG-mapper	UHGV-1383075_3	97139.C824_00155	147.0	1.62e-37	N/A	N/A
Pfam	UHGV-1383075_3	PF08401	N/A	N/A	N-terminal domain of anti-restriction factor ArdC	ArdcN
Pfam	UHGV-1383075_3	PF18818	N/A	N/A	Zincin-like metallopeptidase	MPTase-PolyVal
COG	UHGV-1383075_3	COG4227	N/A	N/A	Antirestriction protein ArdC	N/A
structural_annotation	UHGV-1383075_3	PF18818,PF08401,COG4227	N/A	N/A	N/A	N/A
PHROG	UHGV-1383075_24	phrog_918	106.8	8e-32	N/A	unknown function
UniRef90	UHGV-1383075_24	UniRef90_UPI001D0B68F4	135.0	1.25e-39	N/A	N/A
eggNOG-mapper	UHGV-1383075_24	411473.RUMCAL_00361	111.0	8.06e-31	N/A	N/A
Pfam	UHGV-1383075_24	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1383075_24	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-1383075_29	phrog_10714	44.1	0.0000000000035	N/A	unknown function
eggNOG-mapper	UHGV-1383075_29	1123263.AUKY01000015_gene1588	52.4	0.000000224	N/A	N/A
PHROG	UHGV-1383075_32	phrog_5968	180.7	0	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1383075_32	UniRef90_UPI000FCB03D8	209.0	0	phage replisome organizer N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1383075_32	755731.Clo1100_1616	193.0	0	Phage replisome organizer	N/A
Pfam	UHGV-1383075_32	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-1383075_32	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
COG	UHGV-1383075_32	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1383075_32	PF09681,TIGR01714,COG3388	N/A	N/A	N/A	N/A
PHROG	UHGV-1383075_35	phrog_4973	64.7	1.4e-18	N/A	unknown function
Pfam	UHGV-1383075_35	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
KOfam	UHGV-1383075_36	K03111	51.0	0.000000000000035	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1383075_36	phrog_44	55.7	0.0000000000000011	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1383075_36	UniRef90_A0A6G7Y1U6	59.7	0.00000000955	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1383075_36	1121440.AUMA01000010_gene392	54.7	0.000000231	PFAM single-strand binding protein Primosomal replication protein n	N/A
Pfam	UHGV-1383075_36	PF00436	N/A	N/A	Single-strand binding protein family	SSB
COG	UHGV-1383075_36	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1383075_36	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-1383075_37	K01160	49.1	0.00000000000015	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1383075_37	phrog_1682	65.7	7.1e-19	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1383075_37	UniRef90_F8J189	98.6	5.33e-24	Putative Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-1383075_37	508419.F8J189_9CAUD	98.6	8.95e-25	magnesium ion binding	N/A
Pfam	UHGV-1383075_37	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
structural_annotation	UHGV-1383075_37	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1383075_38	phrog_1389	42.5	0.000000000011	N/A	unknown function
eggNOG-mapper	UHGV-1383075_38	1347392.CCEZ01000060_gene3269	57.8	0.00000000314	N/A	N/A
structural_annotation	UHGV-1383075_38	PF11056,TIGR04376,COG1842	N/A	N/A	N/A	N/A
PHROG	UHGV-1383075_39	phrog_7566	74.4	1.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-1383075_39	1235800.C819_00511	66.2	0.00000000000172	N/A	N/A
PHROG	UHGV-1383075_40	phrog_298	81.1	1e-23	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1383075_40	UniRef90_A0A3D5XTJ3	117.0	2.45e-29	Cas_Cas4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1383075_40	1399942.U3PDT7_9CAUD	93.2	1e-20	nuclease activity	N/A
Pfam	UHGV-1383075_40	PF12705	N/A	N/A	PD-(D/E)XK nuclease superfamily	PDDEXK_1
structural_annotation	UHGV-1383075_40	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-1383075_41	phrog_6244	83.9	2.2e-24	N/A	unknown function
eggNOG-mapper	UHGV-1383075_41	1399942.U3PIX9_9CAUD	55.1	0.0000000227	N/A	N/A
structural_annotation	UHGV-1383075_41	PF05565	N/A	N/A	N/A	N/A
PHROG	UHGV-1383075_42	phrog_155	79.4	5.5e-23	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1383075_42	UniRef90_UPI001E498420	113.0	1.25e-27	ERF family protein	N/A
eggNOG-mapper	UHGV-1383075_42	1415775.U729_2586	98.6	1.07e-22	ERF superfamily	N/A
Pfam	UHGV-1383075_42	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1383075_42	PF04404	N/A	N/A	N/A	N/A
Pfam	UHGV-1383075_44	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
UniRef90	UHGV-1383075_45	UniRef90_UPI001F4BDA5E	56.2	0.00000000948	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1383075_45	445972.ANACOL_01800	47.0	0.00000497	N/A	N/A
Pfam	UHGV-1383075_45	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1383075_45	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-1383075_45	PF05339,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1383075_46	K22300	54.6	0.0000000000000025	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1383075_46	phrog_8	57.2	4.4e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1383075_46	UniRef90_A0A1G6F4M6	66.6	0.00000000000494	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
eggNOG-mapper	UHGV-1383075_46	697329.Rumal_3450	57.0	0.0000000244	N/A	N/A
PADLOC	UHGV-1383075_46	retron_type_VI_hth_cluster2_1	44.5	0.0000000000045	N/A	Retron
Pfam	UHGV-1383075_46	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1383075_46	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
KOfam	UHGV-1383075_47	K14059	176.3	0	int; integrase	N/A
PHROG	UHGV-1383075_47	phrog_1	162.1	0	integrase	integration and excision
UniRef90	UHGV-1383075_47	UniRef90_UPI00189AE8E1	219.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-1383075_47	1123263.AUKY01000072_gene2117	127.0	1.78e-30	Phage integrase family	N/A
Pfam	UHGV-1383075_47	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1383075_47	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1383075_47	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1383075_48	phrog_5073	50.4	0.000000000000028	tail fiber protein	tail
Pfam	UHGV-1383075_48	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
KOfam	UHGV-1383075_49	K16628	51.8	0.0000000000000017	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-1383075_49	phrog_819	105.8	1e-31	tail protein	tail
eggNOG-mapper	UHGV-1383075_49	290402.Cbei_3387	89.4	9.73e-19	N/A	N/A
Pfam	UHGV-1383075_49	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-1383075_51	PF16640,TIGR04488	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1383075_52	871968.DESME_08840	124.0	2.49e-25	N/A	N/A
PHROG	UHGV-1383075_54	phrog_37604	82.4	4.9e-24	N/A	unknown function
eggNOG-mapper	UHGV-1383075_54	1232443.BAIA02000078_gene10	76.6	7.65e-16	N/A	N/A
PHROG	UHGV-1383075_55	phrog_881	67.1	1.6e-19	holin	lysis
UniRef90	UHGV-1383075_55	UniRef90_UPI0018A8FD4D	73.2	0.00000000000000289	phage holin	N/A
eggNOG-mapper	UHGV-1383075_55	1680.BADO_1216	72.4	0.00000000000000105	Putative phage holin Dp-1	N/A
Pfam	UHGV-1383075_55	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-1383075_55	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-1383075_56	phrog_11037	48.8	0.000000000000094	N/A	unknown function
UniRef90	UHGV-1383075_56	UniRef90_A0A2V2EB84	92.4	1.12e-18	EF-hand domain-containing protein	N/A
eggNOG-mapper	UHGV-1383075_56	428127.EUBDOL_01569	77.8	0.0000000000000893	N/A	N/A
structural_annotation	UHGV-1383075_56	PF08460,PF01551,NF040883,NF033202,COG0739,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-1383075_57	phrog_5717	61.6	8.2e-18	tail protein	tail
UniRef90	UHGV-1383075_57	UniRef90_A0A4P8I8Q2	57.8	0.000000951	Putative minor structural protein	N/A
eggNOG-mapper	UHGV-1383075_57	1217705.F900_01087	66.2	0.0000000000815	N/A	N/A
NCBIFam	UHGV-1383075_58	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-1383075_58	NF040910	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1383075_59	PF10618	N/A	N/A	N/A	N/A
PHROG	UHGV-1383075_60	phrog_24267	69.7	4.5e-20	N/A	unknown function
UniRef90	UHGV-1383075_60	UniRef90_C1MK33	72.8	0.000000000000532	Predicted protein	N/A
eggNOG-mapper	UHGV-1383075_60	35344.A0A097PAT0_BPT12	77.0	0.0000000000000319	N-acetylmuramoyl-L-alanine amidase activity	N/A
structural_annotation	UHGV-1383075_60	COG4675	N/A	N/A	N/A	N/A
UniRef90	UHGV-1383075_62	UniRef90_A0A847CX66	480.0	0	N/A	N/A
eggNOG-mapper	UHGV-1383075_62	871968.DESME_08885	129.0	1.05e-28	N/A	N/A
structural_annotation	UHGV-1383075_62	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1383075_63	PF11650	N/A	N/A	N/A	N/A
PHROG	UHGV-1383075_64	phrog_422	102.6	4e-30	major head protein	head and packaging
UniRef90	UHGV-1383075_64	UniRef90_UPI001C115D36	196.0	0	chitobiase/beta-hexosaminidase C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1383075_64	1408437.JNJN01000001_gene1710	177.0	0	N/A	N/A
structural_annotation	UHGV-1383075_64	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1383075_65	755731.Clo1100_2435	65.9	0.00000000131	N/A	N/A
PHROG	UHGV-1383075_66	phrog_156	158.0	0	portal protein	head and packaging
eggNOG-mapper	UHGV-1383075_66	1408437.JNJN01000001_gene1708	333.0	0	N/A	N/A
structural_annotation	UHGV-1383075_66	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1383075_68	K21523	65.3	2.9e-20	gp17; terminase, large subunit [EC:3.1.-.-]	N/A
PHROG	UHGV-1383075_68	phrog_2	97.6	2e-28	terminase large subunit	head and packaging
UniRef90	UHGV-1383075_68	UniRef90_UPI00189AAAC0	440.0	0	DNA packaging protein	N/A
eggNOG-mapper	UHGV-1383075_68	693746.OBV_23980	424.0	0	phage Terminase large subunit	N/A
COG	UHGV-1383075_68	COG4373	N/A	N/A	Mu-like prophage FluMu protein gp28	N/A
structural_annotation	UHGV-1383075_68	PF03237,PF17289,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1383075_69	phrog_606	48.2	0.00000000000002	terminase small subunit	head and packaging
Pfam	UHGV-1383075_69	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package