UHGV-1383597 (vOTU-058191)

Viral Genome: UHGV-1383597

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1383597
vOTU ID	vOTU-058191
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0286003
Associated BioSample	SAMN02334054
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	11
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9812
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	15.05
Jumbo phage	No

Genome content
Genome length (bp)	43,325
GC content	52.79%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	74
CDS density	91%
Average CDS length (bps)	530.19
Total tRNA genes	2
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1383597_2	K00390	101.0	1.2e-29	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1383597_2	phrog_424	125.4	3.1e-37	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1383597_2	UniRef90_UPI001D087498	420.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1383597_2	1408437.JNJN01000032_gene2312	328.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-1383597_2	BrxP_00001	66.7	3.3e-20	BrxP	BREX
Pfam	UHGV-1383597_2	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1383597_2	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1383597_2	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-1383597_3	K00558	162.0	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1383597_3	phrog_363	241.6	0	DNA methyltransferase	other
UniRef90	UHGV-1383597_3	UniRef90_G4KRB8	335.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-1383597_3	693746.OBV_01900	335.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-1383597_3	DruM2_00001	119.8	4.1e-35	DNA cytosine methylase	Druantia
Pfam	UHGV-1383597_3	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1383597_3	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1383597_3	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1383597_3	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1383597_6	693746.OBV_43260	55.8	0.00000000129	N/A	N/A
structural_annotation	UHGV-1383597_6	PF09035,NF040990	N/A	N/A	N/A	N/A
PHROG	UHGV-1383597_8	phrog_5810	72.5	6.8e-21	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1383597_8	742740.HMPREF9474_03117	194.0	0	N/A	N/A
structural_annotation	UHGV-1383597_8	PF01475,NF006999,COG0735	N/A	N/A	N/A	N/A
KOfam	UHGV-1383597_9	K03111	127.0	2.4e-37	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1383597_9	phrog_44	128.0	7.1e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1383597_9	UniRef90_A0A810QFR8	186.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1383597_9	693746.OBV_12860	176.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1383597_9	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1383597_9	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1383597_9	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1383597_9	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1383597_9	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
UniRef90	UHGV-1383597_10	UniRef90_A0A3D1LDS4	147.0	2.38221e-44	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-1383597_10	445972.ANACOL_01826	91.3	5.02e-23	HNH nucleases	N/A
Pfam	UHGV-1383597_10	PF01844	N/A	N/A	HNH endonuclease	HNH
PHROG	UHGV-1383597_11	phrog_72	57.6	2.2e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1383597_11	UniRef90_UPI001F3F3E5C	164.0	0	recombination protein NinB	N/A
eggNOG-mapper	UHGV-1383597_11	445972.ANACOL_01825	119.0	1.72e-31	N/A	N/A
structural_annotation	UHGV-1383597_11	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-1383597_12	phrog_14970	201.3	0	N/A	unknown function
UniRef90	UHGV-1383597_12	UniRef90_UPI00123F00F5	155.0	2.158e-43	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-1383597_12	397291.C804_03856	144.0	1.38e-39	double-strand break repair protein	N/A
Pfam	UHGV-1383597_12	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-1383597_12	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-1383597_12	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1383597_13	phrog_374	188.9	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1383597_13	UniRef90_A0A0R1VMU2	159.0	0	Pathogenesis-related transcriptional factor and ERF protein	N/A
eggNOG-mapper	UHGV-1383597_13	756499.Desde_1078	154.0	1.82169e-44	N/A	N/A
structural_annotation	UHGV-1383597_13	PF17375	N/A	N/A	N/A	N/A
PHROG	UHGV-1383597_16	phrog_4973	78.5	7.2e-23	N/A	unknown function
UniRef90	UHGV-1383597_16	UniRef90_UPI001D0904CC	93.2	2.09e-23	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1383597_16	584708.Apau_1668	62.0	0.0000000000138	Helix-turn-helix domain	N/A
Pfam	UHGV-1383597_16	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-1383597_16	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
COG	UHGV-1383597_17	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1383597_17	NF007257,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1383597_18	K07448	120.0	2.2e-35	mrr; restriction system protein	N/A
PHROG	UHGV-1383597_18	phrog_19856	45.1	0.00000000000089	N/A	unknown function
UniRef90	UHGV-1383597_18	UniRef90_S0JAU4	131.0	1.08e-33	Mrr_cat domain-containing protein	N/A
eggNOG-mapper	UHGV-1383597_18	689781.AUJX01000015_gene1540	132.0	4.64e-35	restriction endonuclease	N/A
PADLOC	UHGV-1383597_18	ZorD1_00005	70.2	2.5e-20	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-1383597_18	PF04471	N/A	N/A	Restriction endonuclease	Mrr_cat
COG	UHGV-1383597_18	COG1787	N/A	N/A	Endonuclease, HJR/Mrr/RecB family	N/A
structural_annotation	UHGV-1383597_18	PF04471,PF09397,NF003162,COG1787	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1383597_19	PF01381,MF_02017,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1383597_20	K14059	110.3	2.8e-32	int; integrase	N/A
PHROG	UHGV-1383597_20	phrog_1	125.6	5.5e-37	integrase	integration and excision
UniRef90	UHGV-1383597_20	UniRef90_UPI00195CC1EE	302.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1383597_20	1235835.C814_03141	151.0	2.08e-40	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1383597_20	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1383597_20	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1383597_20	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1383597_21	1378168.N510_03079	66.6	0.0000000000623	N/A	N/A
PHROG	UHGV-1383597_24	phrog_36767	61.3	1.2e-17	N/A	unknown function
UniRef90	UHGV-1383597_24	UniRef90_UPI00067E7E25	79.7	8.19e-18	N/A	N/A
structural_annotation	UHGV-1383597_25	PF18812,COG2929	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1383597_26	PF11950,NF008958	N/A	N/A	N/A	N/A
UniRef90	UHGV-1383597_27	UniRef90_A0A843IZ65	63.5	0.0000000000106	Sigma70_r4 domain-containing protein	N/A
Pfam	UHGV-1383597_27	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
COG	UHGV-1383597_27	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1383597_27	PF04545,MF_00245,TIGR02985,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-1383597_28	K11062	108.8	4.8e-32	entD; probable enterotoxin D	N/A
PHROG	UHGV-1383597_28	phrog_1794	110.0	2.9e-32	amidase	lysis
UniRef90	UHGV-1383597_28	UniRef90_A0A3D4VSU2	164.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1383597_28	411470.RUMGNA_02087	150.0	4.53001e-40	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1383597_28	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1383597_28	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1383597_28	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-1383597_29	phrog_13256	61.3	9.7e-18	N/A	unknown function
eggNOG-mapper	UHGV-1383597_29	1226322.HMPREF1545_00166	75.1	6.48e-17	N/A	N/A
PHROG	UHGV-1383597_31	phrog_937	49.0	0.00000000000011	hemolysin	other
eggNOG-mapper	UHGV-1383597_31	1519439.JPJG01000023_gene533	73.2	0.00000000000000359	N/A	N/A
KOfam	UHGV-1383597_32	K01104	41.5	0.000000000011	E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]	N/A
UniRef90	UHGV-1383597_32	UniRef90_UPI001BF10870	194.0	0	Tyrosine-protein phosphatase	N/A
eggNOG-mapper	UHGV-1383597_32	610130.Closa_0587	69.3	0.000000000248	Tyrosine phosphatase family	N/A
Pfam	UHGV-1383597_32	PF13350	N/A	N/A	Tyrosine phosphatase family	Y_phosphatase3
COG	UHGV-1383597_32	COG2365	N/A	N/A	Protein tyrosine/serine phosphatase Oca4	N/A
structural_annotation	UHGV-1383597_32	PF13350,TIGR01244,COG2365	N/A	N/A	N/A	N/A
KOfam	UHGV-1383597_33	K16628	47.4	0.000000000000057	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-1383597_33	phrog_819	49.5	0.000000000000051	tail protein	tail
eggNOG-mapper	UHGV-1383597_33	1519439.JPJG01000060_gene1892	83.2	0.0000000000000703	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-1383597_33	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1383597_33	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-1383597_33	PF10651,NF033814	N/A	N/A	N/A	N/A
PHROG	UHGV-1383597_37	phrog_32308	68.6	6.3e-20	N/A	unknown function
eggNOG-mapper	UHGV-1383597_37	1122918.KB907248_gene4487	82.0	0.000000000000179	N/A	N/A
structural_annotation	UHGV-1383597_37	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1383597_38	phrog_1194	84.1	1.3e-24	N/A	unknown function
eggNOG-mapper	UHGV-1383597_38	1121333.JMLH01000047_gene1008	75.1	8.82e-16	N/A	N/A
Pfam	UHGV-1383597_38	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1383597_38	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1383597_39	phrog_1535	97.9	7.4e-40	tail length tape measure protein	tail
UniRef90	UHGV-1383597_39	UniRef90_A0A173WM72	85.1	0.000000000000321	Phage-related protein	N/A
eggNOG-mapper	UHGV-1383597_39	1123263.AUKY01000015_gene1620	94.0	9.65e-17	Phage tail tape measure protein TP901	N/A
COG	UHGV-1383597_39	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-1383597_40	1121333.JMLH01000047_gene1011	51.2	0.00000108	N/A	N/A
UniRef90	UHGV-1383597_41	UniRef90_UPI001D0975F6	95.1	5.5e-23	N/A	N/A
eggNOG-mapper	UHGV-1383597_42	1298920.KI911353_gene2652	180.0	0	N/A	N/A
structural_annotation	UHGV-1383597_42	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1383597_43	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1383597_44	476272.RUMHYD_01963	81.3	5.22e-17	N/A	N/A
eggNOG-mapper	UHGV-1383597_45	1298920.KI911353_gene2656	85.1	1.91e-19	N/A	N/A
UniRef90	UHGV-1383597_46	UniRef90_A0A1V5X694	83.2	1.08e-18	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1383597_46	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1383597_46	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1383597_47	phrog_544	71.4	1e-20	major head protein	head and packaging
eggNOG-mapper	UHGV-1383597_47	428127.EUBDOL_01555	228.0	0	N/A	N/A
structural_annotation	UHGV-1383597_47	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1383597_50	phrog_6577	42.4	0.000000000003	N/A	unknown function
UniRef90	UHGV-1383597_50	UniRef90_A0A3D3Y4T2	273.0	0	Phage_Mu_F domain-containing protein	N/A
Pfam	UHGV-1383597_50	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-1383597_50	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1383597_50	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1383597_51	phrog_64	213.3	0	portal protein	head and packaging
UniRef90	UHGV-1383597_51	UniRef90_A0A3D3Y472	795.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1383597_51	1123263.AUKY01000015_gene1609	384.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1383597_51	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1383597_51	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1383597_52	phrog_38	193.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-1383597_52	UniRef90_UPI000419A6BC	409.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1383597_52	1232453.BAIF02000058_gene1623	413.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-1383597_52	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1383597_52	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1383597_52	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
UniRef90	UHGV-1383597_53	UniRef90_A0A318EMC2	66.6	0.000000000296	DNA-packaging protein gp3	N/A
eggNOG-mapper	UHGV-1383597_53	877421.AUJT01000054_gene66	56.2	0.000000148	N/A	N/A
Pfam	UHGV-1383597_53	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
PHROG	UHGV-1383597_54	phrog_33872	40.8	0.000000000013	N/A	unknown function
structural_annotation	UHGV-1383597_55	PF10723	N/A	N/A	N/A	N/A
KOfam	UHGV-1383597_58	K03466	182.7	0	ftsK, spoIIIE; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family	N/A
PHROG	UHGV-1383597_58	phrog_1358	142.3	1.90016e-42	FtsK/SpoIIIE-like protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1383597_58	UniRef90_A0A3D3Y6X7	336.0	0	FtsK domain-containing protein	N/A
eggNOG-mapper	UHGV-1383597_58	1121445.ATUZ01000013_gene1292	137.0	3.09e-34	PFAM cell divisionFtsK SpoIIIE	N/A
PADLOC	UHGV-1383597_58	SspH_00004	77.4	9.1e-23	SspH	SSP
Pfam	UHGV-1383597_58	PF01580	N/A	N/A	FtsK/SpoIIIE family	FtsK_SpoIIIE
COG	UHGV-1383597_58	COG1674	N/A	N/A	DNA segregation ATPase FtsK/SpoIIIE or related protein	N/A
structural_annotation	UHGV-1383597_58	PF01580,MF_00350,TIGR03925,COG4128	N/A	N/A	N/A	N/A
PHROG	UHGV-1383597_60	phrog_1770	51.7	0.000000000000018	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1383597_60	536233.CLO_1822	143.0	3.80999e-41	N/A	N/A
structural_annotation	UHGV-1383597_60	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
Pfam	UHGV-1383597_61	PF13556	N/A	N/A	PucR C-terminal helix-turn-helix domain	HTH_30
Pfam	UHGV-1383597_61	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
COG	UHGV-1383597_61	COG3835	N/A	N/A	Sugar diacid utilization regulator CdaR	N/A
structural_annotation	UHGV-1383597_62	PF10013	N/A	N/A	N/A	N/A
UniRef90	UHGV-1383597_63	UniRef90_UPI0019D1E2CF	258.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-1383597_63	1410632.JHWW01000006_gene695	197.0	0	N/A	N/A
Pfam	UHGV-1383597_63	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
structural_annotation	UHGV-1383597_63	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-1383597_64	phrog_31336	48.6	0.000000000000089	N/A	unknown function
UniRef90	UHGV-1383597_64	UniRef90_A0A5C7LKL9	75.5	0.00000000000000126	N/A	N/A
eggNOG-mapper	UHGV-1383597_64	1357732.A0A059PYA6_9CAUD	64.3	0.00000000000664	N/A	N/A
Pfam	UHGV-1383597_64	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-1383597_64	PF18909	N/A	N/A	N/A	N/A
Pfam	UHGV-1383597_65	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1383597_65	NF041588	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1383597_69	PF20549,MF_00436,NF005100,COG5475	N/A	N/A	N/A	N/A
PHROG	UHGV-1383597_73	phrog_38832	71.9	9.1e-27	N/A	unknown function
eggNOG-mapper	UHGV-1383597_73	665956.HMPREF1032_00143	88.6	5.99e-20	N/A	N/A