UHGV-1383948 (vOTU-001480)

Viral Genome: UHGV-1383948

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1383948
vOTU ID	vOTU-001480
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0285201
Associated BioSample	SAMEA3665056
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9801
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	25.38
Jumbo phage	No

Genome content
Genome length (bp)	43,177
GC content	50.31%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	64
CDS density	94%
Average CDS length (bps)	632.34
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1383948_1	K24213	41.5	0.000000000016	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	N/A
PHROG	UHGV-1383948_1	phrog_27197	63.1	5.3e-18	N/A	unknown function
eggNOG-mapper	UHGV-1383948_1	886882.PPSC2_p0363	92.4	1.29e-19	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1383948_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-1383948_1	NF007410	N/A	N/A	N/A	N/A
KOfam	UHGV-1383948_2	K01449	53.2	0.000000000000006	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1383948_2	phrog_30550	149.0	1.82169e-44	N/A	unknown function
UniRef90	UHGV-1383948_2	UniRef90_R6CIF0	128.0	8.52e-35	Hydrolase_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1383948_2	1519439.JPJG01000077_gene920	115.0	9.38e-31	Cell Wall Hydrolase	N/A
Pfam	UHGV-1383948_2	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
structural_annotation	UHGV-1383948_2	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A
PHROG	UHGV-1383948_3	phrog_954	195.7	0	DNA methyltransferase	other
UniRef90	UHGV-1383948_3	UniRef90_A0A810Q0N4	271.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1383948_3	1280698.AUJS01000007_gene1028	269.0	0	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA	N/A
PADLOC	UHGV-1383948_3	MTase_II_00074	207.9	0	Type II methyltransferase	RM
Pfam	UHGV-1383948_3	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-1383948_3	COG1092	N/A	N/A	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	N/A
structural_annotation	UHGV-1383948_3	PF05148,MF_03044,NF033398,COG1041	N/A	N/A	N/A	N/A
Pfam	UHGV-1383948_4	PF04448	N/A	N/A	N/A	DUF551
Pfam	UHGV-1383948_11	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1383948_11	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1383948_11	PF13560,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1383948_13	K00571	103.6	8.9e-31	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1383948_13	phrog_67	72.3	1.9e-30	DNA methyltransferase	other
UniRef90	UHGV-1383948_13	UniRef90_A0A8D9PDC5	328.0	0	Adenine specific DNA methyltransferase	N/A
eggNOG-mapper	UHGV-1383948_13	1268240.ATFI01000007_gene431	202.0	0	DNA methylase	N/A
PADLOC	UHGV-1383948_13	MTase_II_00172	139.4	2.89999e-41	Type II methyltransferase	RM
Pfam	UHGV-1383948_13	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1383948_13	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1383948_13	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1383948_14	phrog_2245	96.0	4.1e-28	nucleoside triphosphate pyrophosphohydrolase	other
eggNOG-mapper	UHGV-1383948_14	428125.CLOLEP_01814	98.6	4.17e-24	COG NOG14118 non supervised orthologous group	N/A
PHROG	UHGV-1383948_18	phrog_4973	55.0	0.0000000000000015	N/A	unknown function
UniRef90	UHGV-1383948_18	UniRef90_A0A3D3Y0P8	73.6	0.00000000000000131	DNA-binding protein	N/A
Pfam	UHGV-1383948_18	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-1383948_18	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
UniRef90	UHGV-1383948_20	UniRef90_A0A3C0NNN3	58.5	0.000000116	HTH psq-type domain-containing protein	N/A
KOfam	UHGV-1383948_21	K06909	135.6	4.9e-40	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1383948_21	phrog_979	140.5	5.395e-43	terminase large subunit	head and packaging
UniRef90	UHGV-1383948_21	UniRef90_A0A3C0NMI6	629.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-1383948_21	1410650.JHWL01000003_gene2834	553.0	0	N/A	N/A
Pfam	UHGV-1383948_21	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1383948_21	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1383948_21	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1383948_22	phrog_156	293.5	0	portal protein	head and packaging
eggNOG-mapper	UHGV-1383948_22	1410650.JHWL01000003_gene2833	496.0	0	N/A	N/A
structural_annotation	UHGV-1383948_22	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-1383948_23	K07584	60.3	4e-17	N/A	N/A
PHROG	UHGV-1383948_23	phrog_4478	65.8	5.2e-19	peptidase	other
UniRef90	UHGV-1383948_23	UniRef90_A0A6N9P4C8	55.1	0.000000171	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-1383948_23	1321815.HMPREF9193_01055	49.3	0.0000075	Cysteine protease Prp	N/A
Pfam	UHGV-1383948_23	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-1383948_23	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1383948_23	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-1383948_24	phrog_13908	176.4	0	N/A	unknown function
eggNOG-mapper	UHGV-1383948_24	1410650.JHWL01000003_gene2831	95.5	1.25e-19	N/A	N/A
PHROG	UHGV-1383948_25	phrog_1357	199.3	0	major head protein	head and packaging
UniRef90	UHGV-1383948_25	UniRef90_A0A2V2CFL5	535.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1383948_25	1410650.JHWL01000003_gene2830	265.0	0	N/A	N/A
NCBIFam	UHGV-1383948_25	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1383948_25	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1383948_26	phrog_15239	40.6	0.000000000043	N/A	unknown function
PHROG	UHGV-1383948_27	phrog_12105	109.3	2.7e-32	N/A	unknown function
eggNOG-mapper	UHGV-1383948_27	1519439.JPJG01000060_gene1891	67.8	0.000000000000757	N/A	N/A
PHROG	UHGV-1383948_28	phrog_511	207.2	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1383948_28	1410650.JHWL01000003_gene2827	255.0	0	N/A	N/A
structural_annotation	UHGV-1383948_28	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1383948_30	1410650.JHWL01000003_gene2815	90.1	2.05e-16	N/A	N/A
PHROG	UHGV-1383948_31	phrog_22978	313.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1383948_31	693746.OBV_01590	473.0	0	N/A	N/A
Pfam	UHGV-1383948_31	PF18814	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5	PBECR5
PHROG	UHGV-1383948_33	phrog_5302	197.0	0	tail protein	tail
UniRef90	UHGV-1383948_33	UniRef90_R6M197	170.0	2.60642e-43	Ig-like_bact domain-containing protein	N/A
eggNOG-mapper	UHGV-1383948_33	1151292.QEW_0671	73.9	0.0000000000316	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-1383948_33	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-1383948_33	PF14686,TIGR03000,COG1262	N/A	N/A	N/A	N/A
UniRef90	UHGV-1383948_35	UniRef90_R6I1X1	197.0	0	COPII coat assembly protein SEC16 (Protein transport protein SEC16)	N/A
eggNOG-mapper	UHGV-1383948_35	1203606.HMPREF1526_01926	82.0	6.12e-17	N/A	N/A
PHROG	UHGV-1383948_36	phrog_21357	52.2	0.000000000000006	endolysin	lysis
UniRef90	UHGV-1383948_36	UniRef90_UPI001BB47323	95.1	3.85e-20	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-1383948_36	1007096.BAGW01000022_gene2648	79.0	0.00000000000000791	CHAP domain	N/A
Pfam	UHGV-1383948_36	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-1383948_36	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1383948_36	PF10030,TIGR02594,COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-1383948_37	phrog_1863	58.0	1.2e-16	N/A	unknown function
eggNOG-mapper	UHGV-1383948_37	748224.HMPREF9436_01412	88.2	4.16e-22	N/A	N/A
PHROG	UHGV-1383948_38	phrog_10091	110.7	1e-32	holin	lysis
UniRef90	UHGV-1383948_38	UniRef90_A0A1Y4RHF4	131.0	2.63e-38	Phage holin	N/A
eggNOG-mapper	UHGV-1383948_38	445975.COLSTE_02144	115.0	7.85e-33	Bacteriophage holin	N/A
Pfam	UHGV-1383948_38	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1383948_38	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1383948_38	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1383948_38	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1383948_39	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1383948_40	phrog_3754	99.9	2.5e-29	N/A	unknown function
eggNOG-mapper	UHGV-1383948_40	476272.RUMHYD_01764	146.0	7.42688e-44	N/A	N/A
PHROG	UHGV-1383948_41	phrog_21718	93.4	2.4e-27	N/A	unknown function
eggNOG-mapper	UHGV-1383948_41	397290.C810_05210	93.2	3.06e-22	N/A	N/A
PHROG	UHGV-1383948_42	phrog_22984	76.8	2.4e-22	N/A	unknown function
PHROG	UHGV-1383948_43	phrog_16490	151.4	8.40779e-45	N/A	unknown function
eggNOG-mapper	UHGV-1383948_43	1408437.JNJN01000043_gene803	144.0	8.78999e-40	N/A	N/A
PHROG	UHGV-1383948_45	phrog_20016	190.4	0	N/A	unknown function
UniRef90	UHGV-1383948_45	UniRef90_A0A285PT46	201.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1383948_45	1226322.HMPREF1545_00077	166.0	0	N/A	N/A
structural_annotation	UHGV-1383948_45	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1383948_46	PF12510	N/A	N/A	N/A	N/A
KOfam	UHGV-1383948_47	K14059	152.6	4.2039e-45	int; integrase	N/A
PHROG	UHGV-1383948_47	phrog_1	156.3	0	integrase	integration and excision
UniRef90	UHGV-1383948_47	UniRef90_R6I1Y0	359.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-1383948_47	1384066.JAGT01000001_gene153	113.0	5.03e-26	Phage integrase family	N/A
Pfam	UHGV-1383948_47	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1383948_47	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1383948_47	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
COG	UHGV-1383948_48	COG3620	N/A	N/A	Predicted transcriptional regulator, contains an XRE-type HTH domain (archaeal members contain CBS pair)	N/A
structural_annotation	UHGV-1383948_48	PF13443,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1383948_51	UniRef90_A0A8D9PDV2	53.5	0.000000111	DNA methyl phosphotriester repair domain protein	N/A
eggNOG-mapper	UHGV-1383948_51	1392493.JIAB01000001_gene1404	59.3	0.00000000156	repeat protein	N/A
COG	UHGV-1383948_51	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
PHROG	UHGV-1383948_54	phrog_8	41.1	0.000000000037	transcriptional regulator	transcription regulation
UniRef90	UHGV-1383948_54	UniRef90_A0A1V0QCF9	82.8	3.76e-18	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1383948_54	1226322.HMPREF1545_00148	71.2	0.0000000000000256	Transcriptional	N/A
Pfam	UHGV-1383948_54	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1383948_54	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1383948_54	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1383948_55	UniRef90_UPI0018995761	69.3	0.0000000000000405	helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-1383948_55	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1383948_55	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
Pfam	UHGV-1383948_56	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1383948_56	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1383948_58	phrog_253	109.7	2.7e-32	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1383948_58	UniRef90_A0A1C5N4H2	111.0	4.14e-28	Siphovirus Gp157	N/A
eggNOG-mapper	UHGV-1383948_58	1410670.JHXF01000015_gene2268	91.7	2.62e-21	Siphovirus Gp157	N/A
Pfam	UHGV-1383948_58	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1383948_58	PF05565	N/A	N/A	N/A	N/A
PHROG	UHGV-1383948_59	phrog_7838	118.9	4.9e-35	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1383948_59	UniRef90_A0A8D9UGW3	186.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-1383948_59	742767.HMPREF9456_02052	156.0	4.2039e-45	N/A	N/A
structural_annotation	UHGV-1383948_59	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
PHROG	UHGV-1383948_60	phrog_72	47.8	0.00000000000013	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1383948_60	UniRef90_A0A2Z4Q9W9	107.0	3.32e-26	NinB	N/A
eggNOG-mapper	UHGV-1383948_60	445972.ANACOL_01825	77.4	0.00000000000000165	N/A	N/A
structural_annotation	UHGV-1383948_60	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-1383948_61	phrog_7566	89.2	2.8e-26	N/A	unknown function
eggNOG-mapper	UHGV-1383948_61	508419.F8J187_9CAUD	95.9	1.07e-24	N/A	N/A
KOfam	UHGV-1383948_62	K03111	117.9	1.6e-34	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1383948_62	phrog_44	123.0	2.7e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1383948_62	UniRef90_R6IDK3	153.0	2.8026e-45	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1383948_62	1007096.BAGW01000023_gene151	135.0	6.15e-39	Single-strand binding protein family	N/A
Pfam	UHGV-1383948_62	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1383948_62	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1383948_62	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1383948_62	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1383948_62	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1383948_63	phrog_16304	102.5	4.8e-30	N/A	unknown function
UniRef90	UHGV-1383948_63	UniRef90_UPI001E560709	104.0	6.42e-24	N/A	N/A
eggNOG-mapper	UHGV-1383948_63	1345695.CLSA_c35700	55.8	0.00000324	DnaD domain protein	N/A
Pfam	UHGV-1383948_63	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-1383948_63	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1383948_63	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-1383948_64	phrog_4433	67.3	2.8e-19	N/A	unknown function
eggNOG-mapper	UHGV-1383948_64	886882.PPSC2_p0363	98.6	1.19e-22	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1383948_64	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A