UHGV-1384230 (vOTU-156111)

Viral Genome: UHGV-1384230

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1384230
vOTU ID	vOTU-156111
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0246528
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	85.87 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9805
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	10.2
Jumbo phage	No

Genome content
Genome length (bp)	36,177
GC content	52.65%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	62
CDS density	88%
Average CDS length (bps)	515.03
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 85.87)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1384230_1	phrog_36	52.5	0.0000000000000093	transcriptional regulator	transcription regulation
structural_annotation	UHGV-1384230_1	PF07374,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
Pfam	UHGV-1384230_3	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-1384230_3	PF14354	N/A	N/A	N/A	N/A
KOfam	UHGV-1384230_4	K01160	59.7	9.3e-17	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1384230_4	phrog_34	59.4	6.8e-17	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1384230_4	UniRef90_A0A844DBG8	235.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1384230_4	561177.ANHYDRO_01396	133.0	1.21e-38	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1384230_4	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1384230_4	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1384230_4	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1384230_5	phrog_7711	105.4	4.1e-31	N/A	unknown function
eggNOG-mapper	UHGV-1384230_5	1304866.K413DRAFT_1204	99.4	5.56e-25	N/A	N/A
PHROG	UHGV-1384230_7	phrog_757	119.6	2.2e-35	DNA methyltransferase	other
UniRef90	UHGV-1384230_7	UniRef90_UPI001C00B13F	335.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1384230_7	748224.HMPREF9436_03069	221.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-1384230_7	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-1384230_8	phrog_757	47.7	0.00000000000024	DNA methyltransferase	other
UniRef90	UHGV-1384230_8	UniRef90_A0A7J2R6L5	70.1	0.00000000000000751	DNA cytosine methyltransferase (Fragment)	N/A
eggNOG-mapper	UHGV-1384230_8	748224.HMPREF9436_03069	99.4	3.08e-25	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-1384230_8	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-1384230_11	phrog_5968	75.6	6e-22	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1384230_11	UniRef90_UPI001C02E649	358.0	0	DnaD domain protein	N/A
eggNOG-mapper	UHGV-1384230_11	718252.FP2_01000	169.0	0	N/A	N/A
NCBIFam	UHGV-1384230_11	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
COG	UHGV-1384230_11	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1384230_11	PF09681,MF_01819,TIGR01714,TIGR01446,COG3935	N/A	N/A	N/A	N/A
KOfam	UHGV-1384230_12	K25373	43.9	0.0000000000032	ACRV1; acrosomal protein SP-10	N/A
PHROG	UHGV-1384230_12	phrog_14105	233.4	0	N/A	unknown function
UniRef90	UHGV-1384230_12	UniRef90_U2BMS0	223.0	0	Pentapeptide repeat protein	N/A
eggNOG-mapper	UHGV-1384230_12	742740.HMPREF9474_02379	145.0	3.67e-40	dextransucrase activity	N/A
Pfam	UHGV-1384230_12	PF01469	N/A	N/A	Pentapeptide repeats (8 copies)	Pentapeptide_2
COG	UHGV-1384230_12	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
KOfam	UHGV-1384230_13	K03111	130.7	1.8e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1384230_13	phrog_44	134.8	4.2e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1384230_13	UniRef90_A0A844DI52	306.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1384230_13	718252.FP2_06770	187.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1384230_13	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1384230_13	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1384230_13	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1384230_13	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1384230_13	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1384230_14	phrog_561	108.7	6.6e-32	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1384230_14	UniRef90_A0A1G8PW75	142.0	7.56e-38	RecT family protein	N/A
eggNOG-mapper	UHGV-1384230_14	563192.HMPREF0179_00147	153.0	2.24068e-42	N/A	N/A
structural_annotation	UHGV-1384230_14	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1384230_16	PF14120	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1384230_18	PF09537	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1384230_19	PF12270,NF040944	N/A	N/A	N/A	N/A
UniRef90	UHGV-1384230_20	UniRef90_UPI00130EBC54	142.0	8.25365e-43	N/A	N/A
eggNOG-mapper	UHGV-1384230_20	445972.ANACOL_01800	49.7	0.000000686	N/A	N/A
COG	UHGV-1384230_20	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-1384230_20	PF05339,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1384230_21	phrog_373	138.5	4.90006e-41	anti-repressor	transcription regulation
UniRef90	UHGV-1384230_21	UniRef90_UPI001CBC74BC	310.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1384230_21	1291743.LOSG293_110590	157.0	4.62428e-44	Phage regulatory protein	N/A
Pfam	UHGV-1384230_21	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-1384230_21	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-1384230_21	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-1384230_21	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1384230_26	PF01775,MF_00273,NF001981,COG2157	N/A	N/A	N/A	N/A
KOfam	UHGV-1384230_27	K18830	59.1	9.3e-17	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1384230_27	phrog_8	46.2	0.00000000000083	transcriptional regulator	transcription regulation
UniRef90	UHGV-1384230_27	UniRef90_A0A844DFR0	240.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1384230_27	748224.HMPREF9436_01444	165.0	0	N/A	N/A
Pfam	UHGV-1384230_27	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1384230_27	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1384230_27	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1384230_29	phrog_888	63.5	3.7e-35	N/A	unknown function
UniRef90	UHGV-1384230_29	UniRef90_A0A6N7TMA2	419.0	0	SHOCT domain-containing protein	N/A
eggNOG-mapper	UHGV-1384230_29	1415774.U728_165	88.2	4.23e-18	Short C-terminal domain	N/A
Pfam	UHGV-1384230_29	PF14471	N/A	N/A	N/A	DUF4428
Pfam	UHGV-1384230_29	PF09851	N/A	N/A	Short C-terminal domain	SHOCT
structural_annotation	UHGV-1384230_29	PF15947,PF14471	N/A	N/A	N/A	N/A
UniRef90	UHGV-1384230_32	UniRef90_A0A6N7TLT0	170.0	0	Helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-1384230_32	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1384230_33	K14059	119.3	5.8e-35	int; integrase	N/A
PHROG	UHGV-1384230_33	phrog_1	104.6	1.3e-30	integrase	integration and excision
UniRef90	UHGV-1384230_33	UniRef90_UPI00130DFBFE	741.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1384230_33	748224.HMPREF9436_03382	630.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1384230_33	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1384230_33	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1384230_33	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1384230_33	PF00589,PF14659,MF_01808,NF007246,COG4973	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1384230_35	476272.RUMHYD_01772	55.1	0.000000184	N/A	N/A
structural_annotation	UHGV-1384230_35	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-1384230_36	phrog_20016	207.2	0	N/A	unknown function
UniRef90	UHGV-1384230_36	UniRef90_A0A285PT46	207.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1384230_36	1226322.HMPREF1545_00077	182.0	0	N/A	N/A
structural_annotation	UHGV-1384230_36	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1384230_38	phrog_16490	197.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1384230_38	397290.C810_01328	124.0	5.8e-31	N/A	N/A
PHROG	UHGV-1384230_39	phrog_22984	70.3	2.7e-20	N/A	unknown function
PHROG	UHGV-1384230_40	phrog_21718	86.8	2.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-1384230_40	397290.C810_05210	81.6	2.07e-17	N/A	N/A
PHROG	UHGV-1384230_41	phrog_3754	92.5	4.6e-27	N/A	unknown function
eggNOG-mapper	UHGV-1384230_41	1485543.JMME01000025_gene2462	100.0	7.76e-26	N/A	N/A
KOfam	UHGV-1384230_43	K23779	45.4	0.0000000000016	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
Pfam	UHGV-1384230_43	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1384230_43	PF01381,TIGR03070,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1384230_45	phrog_15303	78.8	6e-23	N/A	unknown function
PHROG	UHGV-1384230_46	phrog_1863	73.4	1.7e-21	N/A	unknown function
eggNOG-mapper	UHGV-1384230_46	718252.FP2_04900	144.0	5.1848e-44	N/A	N/A
KOfam	UHGV-1384230_47	K07273	153.7	1.4013e-45	acm; lysozyme	N/A
PHROG	UHGV-1384230_47	phrog_291	106.9	2.2e-31	endolysin	lysis
UniRef90	UHGV-1384230_47	UniRef90_A0A564U0D3	401.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-1384230_47	718252.FP2_04890	239.0	0	hydrolase, family 25	N/A
Pfam	UHGV-1384230_47	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1384230_47	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1384230_47	PF01183,TIGR04053,COG3757	N/A	N/A	N/A	N/A
KOfam	UHGV-1384230_48	K10804	40.0	9.2e-24	tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]	N/A
Pfam	UHGV-1384230_48	PF00657	N/A	N/A	GDSL-like Lipase/Acylhydrolase	Lipase_GDSL
Pfam	UHGV-1384230_48	PF13472	N/A	N/A	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
PHROG	UHGV-1384230_49	phrog_3558	192.7	0	tail protein	tail
UniRef90	UHGV-1384230_49	UniRef90_UPI001C01D15B	150.0	7.52e-35	phage tail protein	N/A
eggNOG-mapper	UHGV-1384230_49	1235799.C818_04233	94.7	8.38e-18	Prophage endopeptidase tail	N/A
Pfam	UHGV-1384230_49	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-1384230_49	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1384230_49	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
UniRef90	UHGV-1384230_50	UniRef90_R6QN45	90.1	3.74e-18	Putative phage tail component domain protein	N/A
eggNOG-mapper	UHGV-1384230_50	411490.ANACAC_00709	82.4	4.68e-16	phage tail	N/A
COG	UHGV-1384230_50	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1384230_50	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1384230_51	phrog_28775	128.6	4.7e-38	tail length tape measure protein	tail
UniRef90	UHGV-1384230_51	UniRef90_A0A844DDD5	1077.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-1384230_51	1492737.FEM08_12070	143.0	7.75e-33	tape measure	N/A
Pfam	UHGV-1384230_51	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1384230_51	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1384230_51	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1384230_51	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1384230_54	phrog_885	60.7	2e-17	major tail protein	tail
eggNOG-mapper	UHGV-1384230_54	457396.CSBG_01054	58.9	0.0000000739	Chitobiase/beta-hexosaminidase C-terminal domain	N/A
COG	UHGV-1384230_54	COG2273	N/A	N/A	Beta-glucanase, GH16 family	N/A
structural_annotation	UHGV-1384230_54	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1384230_55	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-1384230_56	phrog_17977	49.7	0.000000000000057	N/A	unknown function
UniRef90	UHGV-1384230_56	UniRef90_A0A844DHJ8	239.0	0	Phage head closure protein	N/A
structural_annotation	UHGV-1384230_56	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1384230_58	phrog_247	209.4	0	major head protein	head and packaging
UniRef90	UHGV-1384230_58	UniRef90_UPI001BA5448B	229.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-1384230_58	33035.JPJF01000106_gene3132	353.0	0	N/A	N/A
Pfam	UHGV-1384230_58	PF20036	N/A	N/A	Major capsid protein 13-like	Gp13-like
structural_annotation	UHGV-1384230_58	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1384230_59	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1384230_61	phrog_5	51.4	0.000000000000027	tail completion or Neck1 protein	connector
UniRef90	UHGV-1384230_61	UniRef90_A0A844DDB3	293.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1384230_61	1123309.AQYB01000018_gene814	94.0	1.41e-22	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1384230_61	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1384230_61	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1384230_61	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1384230_62	phrog_8680	186.1	0	N/A	unknown function
UniRef90	UHGV-1384230_62	UniRef90_A0A844D688	347.0	0	N/A	N/A
eggNOG-mapper	UHGV-1384230_62	411902.CLOBOL_05725	171.0	0	N/A	N/A
Pfam	UHGV-1384230_62	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-1384230_62	PF14386	N/A	N/A	N/A	N/A