UHGV-1384617 (vOTU-058232)

Viral Genome: UHGV-1384617

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1384617
vOTU ID	vOTU-058232
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0284125
Associated BioSample	SAMN02334078
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	19
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9824
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	53.05
Jumbo phage	No

Genome content
Genome length (bp)	42,912
GC content	55.19%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	71
CDS density	91%
Average CDS length (bps)	548.24
Total tRNA genes	4
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1384617_1	phrog_4433	130.7	9.1e-38	N/A	unknown function
eggNOG-mapper	UHGV-1384617_1	573061.Clocel_3578	94.0	2.1e-20	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1384617_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-1384617_1	PF12120,NF000066	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1384617_2	1121865.OMW_01950	74.7	1.13e-16	N/A	N/A
structural_annotation	UHGV-1384617_2	PF17516,NF007197	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1384617_3	760568.Desku_0919	96.7	5.19e-22	N/A	N/A
structural_annotation	UHGV-1384617_3	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
KOfam	UHGV-1384617_4	K07741	138.9	5.8e-40	antB; anti-repressor protein	N/A
PHROG	UHGV-1384617_4	phrog_63	115.5	4.1e-33	anti-repressor Ant	transcription regulation
eggNOG-mapper	UHGV-1384617_4	1230342.CTM_16892	206.0	0	Phage antirepressor protein	N/A
Pfam	UHGV-1384617_4	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-1384617_4	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1384617_4	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-1384617_4	PF03374,PF08346,TIGR02681,COG3561,COG3645	N/A	N/A	N/A	N/A
KOfam	UHGV-1384617_9	K22300	71.0	1.9e-19	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1384617_9	phrog_8	55.4	0.0000000000000052	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-1384617_9	748224.HMPREF9436_01444	144.0	8.75812e-43	N/A	N/A
Pfam	UHGV-1384617_9	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1384617_9	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1384617_9	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1384617_11	phrog_4980	103.6	7.9e-31	superinfection exclusion	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-1384617_11	1397278.AYMV01000033_gene1566	68.9	0.000000000028	Host cell surface-exposed lipoprotein	N/A
Pfam	UHGV-1384617_11	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-1384617_11	PF07553	N/A	N/A	Host cell surface-exposed lipoprotein	Lipoprotein_Ltp
structural_annotation	UHGV-1384617_11	PF02631,MF_01114,NF001062,COG2137	N/A	N/A	N/A	N/A
KOfam	UHGV-1384617_15	K14059	153.0	2.8026e-44	int; integrase	N/A
PHROG	UHGV-1384617_15	phrog_1	191.0	0	integrase	integration and excision
eggNOG-mapper	UHGV-1384617_15	411471.SUBVAR_05137	257.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1384617_15	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1384617_15	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1384617_15	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1384617_17	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-1384617_18	phrog_20016	205.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1384617_18	1226322.HMPREF1545_00077	186.0	0	N/A	N/A
structural_annotation	UHGV-1384617_18	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1384617_19	phrog_16490	145.8	1.60028e-42	N/A	unknown function
eggNOG-mapper	UHGV-1384617_19	1408437.JNJN01000043_gene803	140.0	6.66e-38	N/A	N/A
PHROG	UHGV-1384617_20	phrog_22984	79.5	1.9e-22	N/A	unknown function
PHROG	UHGV-1384617_21	phrog_21718	122.2	2.6e-35	N/A	unknown function
eggNOG-mapper	UHGV-1384617_21	397290.C810_05210	100.0	1.06e-24	N/A	N/A
PHROG	UHGV-1384617_22	phrog_3754	102.7	2.5e-29	N/A	unknown function
eggNOG-mapper	UHGV-1384617_22	1235790.C805_00054	108.0	5.26e-29	N/A	N/A
KOfam	UHGV-1384617_24	K23779	58.8	0.000000000000001	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-1384617_24	phrog_1373	42.6	0.000000000061	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-1384617_24	944479.JQLX01000018_gene150	57.0	0.0000000865	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1384617_24	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1384617_24	COG0662	N/A	N/A	Mannose-6-phosphate isomerase, cupin superfamily	N/A
structural_annotation	UHGV-1384617_24	PF01381,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1384617_27	K24213	79.7	2.1e-22	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	N/A
PHROG	UHGV-1384617_27	phrog_5073	108.9	3.2e-31	tail fiber protein	tail
eggNOG-mapper	UHGV-1384617_27	411483.FAEPRAA2165_00757	168.0	6.02558e-44	N/A	N/A
Pfam	UHGV-1384617_27	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-1384617_27	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-1384617_28	phrog_15303	113.8	6.2e-33	N/A	unknown function
Pfam	UHGV-1384617_28	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
KOfam	UHGV-1384617_30	K07273	165.7	0	acm; lysozyme	N/A
PHROG	UHGV-1384617_30	phrog_291	120.2	1.6e-34	endolysin	lysis
eggNOG-mapper	UHGV-1384617_30	718252.FP2_04890	253.0	0	hydrolase, family 25	N/A
Pfam	UHGV-1384617_30	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1384617_30	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1384617_30	PF01183,NF007404,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-1384617_31	phrog_1382	50.6	0.000000000000096	N/A	unknown function
eggNOG-mapper	UHGV-1384617_31	33035.JPJF01000043_gene998	46.2	0.00000297	N/A	N/A
eggNOG-mapper	UHGV-1384617_33	748224.HMPREF9436_03323	81.3	0.00000000000000648	COG NOG18825 non supervised orthologous group	N/A
PHROG	UHGV-1384617_34	phrog_3558	214.6	0	tail protein	tail
eggNOG-mapper	UHGV-1384617_34	1235799.C818_04233	87.4	0.00000000000000184	Prophage endopeptidase tail	N/A
Pfam	UHGV-1384617_34	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-1384617_34	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1384617_34	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1384617_35	1235792.C808_00094	116.0	7.36e-29	phage tail	N/A
COG	UHGV-1384617_35	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1384617_35	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1384617_36	phrog_28775	126.0	2.4e-38	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1384617_36	1492737.FEM08_12070	138.0	2.71e-31	tape measure	N/A
Pfam	UHGV-1384617_36	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1384617_36	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1384617_36	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1384617_36	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1384617_39	phrog_885	69.3	3.7e-19	major tail protein	tail
eggNOG-mapper	UHGV-1384617_39	1111121.HMPREF1247_0789	168.0	0	N/A	N/A
structural_annotation	UHGV-1384617_39	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1384617_40	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-1384617_41	phrog_17977	41.5	0.00000000015	N/A	unknown function
structural_annotation	UHGV-1384617_41	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1384617_43	phrog_544	146.0	2.10055e-42	major head protein	head and packaging
eggNOG-mapper	UHGV-1384617_43	476272.RUMHYD_01776	327.0	0	N/A	N/A
PHROG	UHGV-1384617_46	phrog_5	48.9	0.0000000000012	tail completion or Neck1 protein	connector
eggNOG-mapper	UHGV-1384617_46	929506.CbC4_1219	91.3	2.12e-21	N/A	N/A
Pfam	UHGV-1384617_46	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1384617_46	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1384617_48	phrog_8680	200.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1384617_48	1423790.BN53_04265	182.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
Pfam	UHGV-1384617_48	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-1384617_48	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1384617_48	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-1384617_50	phrog_2468	80.8	4.1e-23	head morphogenesis	head and packaging
eggNOG-mapper	UHGV-1384617_50	1504822.CCNO01000013_gene286	110.0	7.69e-24	cell adhesion	N/A
Pfam	UHGV-1384617_50	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-1384617_50	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1384617_50	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1384617_51	phrog_21498	304.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1384617_51	78346.BRUM_0376	274.0	0	DNA binding	N/A
COG	UHGV-1384617_51	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1384617_51	PF05869,TIGR01712	N/A	N/A	N/A	N/A
PHROG	UHGV-1384617_52	phrog_64	117.7	3.4e-34	portal protein	head and packaging
eggNOG-mapper	UHGV-1384617_52	642492.Clole_2764	79.3	0.000000000000558	phage portal protein, SPP1	N/A
Pfam	UHGV-1384617_52	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1384617_52	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-1384617_53	K06909	137.6	9.2e-40	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1384617_53	phrog_10250	175.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1384617_53	411490.ANACAC_00783	484.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1384617_53	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-1384617_53	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-1384617_53	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1384617_53	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1384617_53	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1384617_54	1235790.C805_00037	111.0	3.83e-29	N/A	N/A
structural_annotation	UHGV-1384617_54	PF04218	N/A	N/A	N/A	N/A
PHROG	UHGV-1384617_55	phrog_36	73.0	3.8e-20	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-1384617_55	748224.HMPREF9436_01463	77.8	3.17e-16	N/A	N/A
Pfam	UHGV-1384617_55	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-1384617_55	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-1384617_57	K01160	58.8	0.0000000000000013	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1384617_57	phrog_34	60.5	2.9e-16	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1384617_57	875454.BAEW01000002_gene491	137.0	4.12e-40	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1384617_57	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1384617_57	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1384617_57	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1384617_58	phrog_7711	104.8	4.8e-30	N/A	unknown function
eggNOG-mapper	UHGV-1384617_58	1304866.K413DRAFT_1204	99.4	5.18e-25	N/A	N/A
structural_annotation	UHGV-1384617_61	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-1384617_62	K02086	63.1	3e-17	dnaD; DNA replication protein	N/A
PHROG	UHGV-1384617_62	phrog_186	72.2	6.7e-20	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1384617_62	877411.JMMA01000002_gene2052	63.5	0.00000000601	N/A	N/A
Pfam	UHGV-1384617_62	PF19808	N/A	N/A	N/A	DUF6291
Pfam	UHGV-1384617_62	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-1384617_62	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
structural_annotation	UHGV-1384617_62	PF19808,PF07261,TIGR01446,COG3935	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1384617_63	PF00436,MF_00720,NF004512,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1384617_64	phrog_2760	183.0	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1384617_64	1235794.C811_01355	154.0	3.14031e-42	RecT family	N/A
Pfam	UHGV-1384617_64	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1384617_64	TIGR01913.1	N/A	N/A	phage recombination protein Bet	N/A
COG	UHGV-1384617_64	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1384617_64	PF03837,TIGR01913,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-1384617_65	phrog_674	150.6	8.40779e-44	N/A	unknown function
eggNOG-mapper	UHGV-1384617_65	556268.OFAG_00840	87.8	2.86e-17	N/A	N/A
Pfam	UHGV-1384617_65	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-1384617_65	PF07083	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1384617_66	PF14120	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1384617_67	PF09537	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1384617_68	PF12270,NF040944	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1384617_69	PF10743,NF033787	N/A	N/A	N/A	N/A
PHROG	UHGV-1384617_71	phrog_27197	91.8	1.7e-27	N/A	unknown function
eggNOG-mapper	UHGV-1384617_71	394503.Ccel_3068	53.1	0.00000147	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1384617_71	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-1384617_71	NF007410	N/A	N/A	N/A	N/A