UHGV-1384785 (vOTU-106047)

Viral Genome: UHGV-1384785

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1384785
vOTU ID	vOTU-106047
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-4373402
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	50.43 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9818
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	47.99
Jumbo phage	No

Genome content
Genome length (bp)	21,749
GC content	32.94%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	25
CDS density	96%
Average CDS length (bps)	830.88
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 50.43)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1384785_1	UniRef90_UPI001749FBD7	130.0	4.07e-37	DEAD/DEAH box helicase family protein	N/A
eggNOG-mapper	UHGV-1384785_1	386043.lwe1326	107.0	3.44e-26	SNF2 family N-terminal domain	N/A
Pfam	UHGV-1384785_1	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
COG	UHGV-1384785_1	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
KOfam	UHGV-1384785_4	K01447	46.6	0.00000000000057	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1384785_4	phrog_635	153.1	1.4013e-45	endolysin	lysis
UniRef90	UHGV-1384785_4	UniRef90_A0A6H1F0K8	528.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-1384785_4	562981.HMPREF0428_01802	528.0	0	Ami_2	N/A
Pfam	UHGV-1384785_4	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1384785_4	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-1384785_4	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1384785_4	PF01510,PF18342,MF_04111,NF041850,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-1384785_5	phrog_1129	42.9	0.0000000000033	holin	lysis
Pfam	UHGV-1384785_5	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
PHROG	UHGV-1384785_7	phrog_27035	234.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1384785_7	1005705.HMPREF9967_1058	132.0	1.29e-29	domain, Protein	N/A
COG	UHGV-1384785_7	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
PHROG	UHGV-1384785_8	phrog_199	60.5	2.2e-17	holin	lysis
UniRef90	UHGV-1384785_8	UniRef90_A0A6H1EZP6	214.0	0	Phage holin family protein	N/A
eggNOG-mapper	UHGV-1384785_8	562981.HMPREF0428_01805	214.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1384785_8	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1384785_8	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-1384785_8	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1384785_10	phrog_1060	57.6	1.4e-16	N/A	unknown function
UniRef90	UHGV-1384785_10	UniRef90_A0A420YQX1	184.0	0	N/A	N/A
eggNOG-mapper	UHGV-1384785_10	1321820.HMPREF1983_00919	54.7	0.000000252	N/A	N/A
Pfam	UHGV-1384785_10	PF07104	N/A	N/A	N/A	DUF1366
structural_annotation	UHGV-1384785_10	PF07104,TIGR00638	N/A	N/A	N/A	N/A
PHROG	UHGV-1384785_11	phrog_12312	225.3	0	virion structural protein	head and packaging
UniRef90	UHGV-1384785_11	UniRef90_UPI00195A94EB	1555.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1384785_11	1123315.AUIP01000003_gene255	595.0	0	heme binding	N/A
Pfam	UHGV-1384785_11	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-1384785_11	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
NCBIFam	UHGV-1384785_11	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1384785_11	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1384785_12	phrog_202	104.6	6.7e-31	distal tail protein Dit	tail
UniRef90	UHGV-1384785_12	UniRef90_UPI00195821E5	470.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-1384785_12	1123315.AUIP01000003_gene254	199.0	0	Phage tail protein	N/A
Pfam	UHGV-1384785_12	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-1384785_12	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-1384785_12	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1384785_12	PF05709,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1384785_13	phrog_58	337.1	0	tail length tape measure protein	tail
UniRef90	UHGV-1384785_13	UniRef90_UPI00195F12AA	788.0	0	tape measure protein	N/A
eggNOG-mapper	UHGV-1384785_13	1399942.U3PFW9_9CAUD	332.0	0	N-acetylmuramoyl-L-alanine amidase activity	N/A
Pfam	UHGV-1384785_13	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1384785_13	TIGR02675.1	N/A	N/A	tape measure protein	N/A
structural_annotation	UHGV-1384785_13	PF20155,TIGR02675,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1384785_14	phrog_441	74.1	2.3e-21	tail assembly chaperone	tail
UniRef90	UHGV-1384785_14	UniRef90_D7RWD7	76.3	3.16e-16	Gp13	N/A
eggNOG-mapper	UHGV-1384785_14	764561.D7RWD7_9CAUD	76.3	5.29e-17	N/A	N/A
PHROG	UHGV-1384785_15	phrog_441	85.5	7e-25	tail assembly chaperone	tail
UniRef90	UHGV-1384785_15	UniRef90_UPI0019577594	220.0	0	tail assembly chaperone	N/A
eggNOG-mapper	UHGV-1384785_15	1095737.HMPREF1110_1743	116.0	2.74e-32	Phage tail assembly chaperone protein, TAC	N/A
Pfam	UHGV-1384785_15	PF12363	N/A	N/A	Phage tail assembly chaperone protein, TAC	Phage_TAC_12
structural_annotation	UHGV-1384785_15	PF12363	N/A	N/A	N/A	N/A
PHROG	UHGV-1384785_16	phrog_238	200.8	0	major tail protein	tail
UniRef90	UHGV-1384785_16	UniRef90_UPI00195CDFE0	322.0	0	phage major tail protein, TP901-1 family	N/A
eggNOG-mapper	UHGV-1384785_16	764561.D7RWD5_9CAUD	218.0	0	Phage major tail protein 2	N/A
Pfam	UHGV-1384785_16	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
NCBIFam	UHGV-1384785_16	TIGR02126.1	N/A	N/A	phage major tail protein, TP901-1 family	N/A
structural_annotation	UHGV-1384785_16	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1384785_17	phrog_176	122.7	1.9e-36	tail terminator	connector
UniRef90	UHGV-1384785_17	UniRef90_UPI00195CDF4B	258.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-1384785_17	663241.C9E2J9_9CAUD	178.0	0	N/A	N/A
structural_annotation	UHGV-1384785_17	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-1384785_18	phrog_5	64.8	2.2e-18	tail completion or Neck1 protein	connector
UniRef90	UHGV-1384785_18	UniRef90_UPI0019593F93	197.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1384785_18	1123315.AUIP01000003_gene248	100.0	5.84e-26	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1384785_18	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1384785_18	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1384785_18	PF05069,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1384785_19	phrog_348	67.5	2.2e-19	minor head protein	head and packaging
UniRef90	UHGV-1384785_19	UniRef90_A0A380JX45	96.3	8.29e-24	N/A	N/A
eggNOG-mapper	UHGV-1384785_19	663952.SDD27957_09115	99.0	1.35e-25	N/A	N/A
structural_annotation	UHGV-1384785_19	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1384785_20	phrog_132	75.4	6.8e-22	head-tail adaptor	connector
UniRef90	UHGV-1384785_20	UniRef90_UPI000C7F9E37	226.0	0	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1384785_20	1123302.KB904182_gene68	115.0	5.03e-32	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1384785_20	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1384785_20	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-1384785_21	phrog_29	232.5	0	major head protein	head and packaging
UniRef90	UHGV-1384785_21	UniRef90_UPI001957DD3A	639.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-1384785_21	1123302.KB904182_gene69	433.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1384785_21	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1384785_21	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1384785_22	phrog_909	88.7	5.2e-26	major head protein	head and packaging
UniRef90	UHGV-1384785_22	UniRef90_A0A4D6A2S3	182.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1384785_22	1123302.KB904182_gene70	182.0	0	N/A	N/A
structural_annotation	UHGV-1384785_22	PF02924	N/A	N/A	N/A	N/A
PHROG	UHGV-1384785_23	phrog_172	112.1	6.1e-33	head scaffolding protein	head and packaging
UniRef90	UHGV-1384785_23	UniRef90_UPI00195EC086	341.0	0	N/A	N/A
eggNOG-mapper	UHGV-1384785_23	1123315.AUIP01000003_gene242	112.0	2.39e-28	N/A	N/A
Pfam	UHGV-1384785_23	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1384785_23	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1384785_25	phrog_115	284.0	0	minor head protein	head and packaging
UniRef90	UHGV-1384785_25	UniRef90_UPI0019573A4B	557.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1384785_25	1123315.AUIP01000003_gene236	280.0	0	head morphogenesis protein, SPP1 gp7 family	N/A
Pfam	UHGV-1384785_25	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1384785_25	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1384785_25	COG2369	N/A	N/A	N/A	N/A