UHGV-1387336 (vOTU-085488)

Viral Genome: UHGV-1387336

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1387336
vOTU ID	vOTU-085488
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0270511
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	95.76 (High-quality)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.981
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	33.14
Jumbo phage	No

Genome content
Genome length (bp)	40,375
GC content	60.27%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	66
CDS density	93%
Average CDS length (bps)	568.59
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 95.76)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1387336_2	UniRef90_A0A098GES5	97.1	3.1e-24	Putative phage associated protein	N/A
structural_annotation	UHGV-1387336_2	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
PHROG	UHGV-1387336_6	phrog_474	101.1	1.6e-29	phosphofructokinase	other
UniRef90	UHGV-1387336_6	UniRef90_A0A2V2EHL9	145.0	2.31214e-43	N/A	N/A
eggNOG-mapper	UHGV-1387336_6	1203606.HMPREF1526_00237	97.4	5.05e-25	N/A	N/A
Pfam	UHGV-1387336_6	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-1387336_6	PF19905	N/A	N/A	N/A	N/A
KOfam	UHGV-1387336_8	K02315	116.5	2.6e-34	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1387336_8	phrog_50	109.6	3.1e-32	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1387336_8	UniRef90_A0A810Q3X8	353.0	0	IstB_IS21 domain-containing protein	N/A
eggNOG-mapper	UHGV-1387336_8	445972.ANACOL_01829	184.0	0	N/A	N/A
Pfam	UHGV-1387336_8	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-1387336_8	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1387336_8	PF01695,MF_01158,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-1387336_9	phrog_2149	69.5	5e-20	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1387336_9	742740.HMPREF9474_03117	185.0	0	N/A	N/A
structural_annotation	UHGV-1387336_9	PF01978,NF000243,COG0735	N/A	N/A	N/A	N/A
KOfam	UHGV-1387336_10	K07455	288.8	0	recT; recombination protein RecT	N/A
PHROG	UHGV-1387336_10	phrog_148	268.2	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1387336_10	UniRef90_A0A1Y4W4R3	367.0	0	Recombinase RecT	N/A
eggNOG-mapper	UHGV-1387336_10	1226322.HMPREF1545_00015	365.0	0	RecT family	N/A
Pfam	UHGV-1387336_10	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1387336_10	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-1387336_10	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1387336_10	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-1387336_11	phrog_434	310.3	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1387336_11	UniRef90_A0A1Y4W4B5	445.0	0	YqaJ domain-containing protein	N/A
eggNOG-mapper	UHGV-1387336_11	1121344.JHZO01000003_gene985	351.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-1387336_11	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-1387336_11	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-1387336_11	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1387336_11	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-1387336_14	phrog_1029	226.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1387336_14	1203606.HMPREF1526_01890	249.0	0	N/A	N/A
structural_annotation	UHGV-1387336_14	PF10065,COG5532	N/A	N/A	N/A	N/A
PHROG	UHGV-1387336_15	phrog_997	110.0	1.5e-32	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1387336_15	UniRef90_R6MCS9	99.8	1.13e-24	N/A	N/A
eggNOG-mapper	UHGV-1387336_15	1519439.JPJG01000059_gene1910	137.0	2.9e-40	N/A	N/A
KOfam	UHGV-1387336_16	K07319	105.8	3.1e-31	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-1387336_16	phrog_16	236.0	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1387336_16	UniRef90_A0A1Q6JHY3	1505.0	0	DNA methylase N-4	N/A
eggNOG-mapper	UHGV-1387336_16	1007096.BAGW01000031_gene119	1346.0	0	DEAD-like helicases superfamily	N/A
PADLOC	UHGV-1387336_16	MTase_II_00157	41.6	6.7e-16	Type II methyltransferase	RM
Pfam	UHGV-1387336_16	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-1387336_16	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1387336_16	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-1387336_16	PF01555,PF16203,PF04851,MF_01821,MF_00472,NF041790,NF008572,COG0553,COG0863	N/A	N/A	N/A	N/A
UniRef90	UHGV-1387336_18	UniRef90_A0A8D9PDM8	66.2	0.000000000000623	Pyocin activator protein	N/A
structural_annotation	UHGV-1387336_18	PF11112,COG3311	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1387336_19	1256908.HMPREF0373_02563	51.2	0.0000017	Helix-turn-helix domain	N/A
Pfam	UHGV-1387336_19	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-1387336_19	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1387336_19	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1387336_20	UniRef90_A0A3B0CI93	107.0	2.84e-29	N/A	N/A
eggNOG-mapper	UHGV-1387336_20	1235790.C805_01708	105.0	4.03e-29	N/A	N/A
Pfam	UHGV-1387336_20	PF13783	N/A	N/A	N/A	DUF4177
UniRef90	UHGV-1387336_21	UniRef90_A0A3D3Y0G5	110.0	3.21e-28	HTH cro/C1-type domain-containing protein	N/A
structural_annotation	UHGV-1387336_21	NF041951,COG3655	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1387336_22	742723.HMPREF9477_00931	47.8	0.0000095	N/A	N/A
structural_annotation	UHGV-1387336_22	COG1321	N/A	N/A	N/A	N/A
Pfam	UHGV-1387336_24	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1387336_24	COG1426	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1387336_24	PF12844	N/A	N/A	N/A	N/A
KOfam	UHGV-1387336_25	K14059	155.3	0	int; integrase	N/A
PHROG	UHGV-1387336_25	phrog_1	149.9	2.10195e-44	integrase	integration and excision
UniRef90	UHGV-1387336_25	UniRef90_A0A1C5W824	502.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1387336_25	445972.ANACOL_01797	281.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1387336_25	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-1387336_25	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1387336_25	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1387336_25	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
UniRef90	UHGV-1387336_26	UniRef90_A0A7M1RTM1	73.6	0.000000000000445	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-1387336_26	1408437.JNJN01000043_gene801	76.6	0.00000000000000518	N/A	N/A
structural_annotation	UHGV-1387336_27	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1387336_28	phrog_16490	62.7	7.9e-18	N/A	unknown function
PHROG	UHGV-1387336_29	phrog_22984	46.1	0.00000000000089	N/A	unknown function
structural_annotation	UHGV-1387336_31	COG4451	N/A	N/A	N/A	N/A
PHROG	UHGV-1387336_33	phrog_25567	59.4	4.3e-17	N/A	unknown function
COG	UHGV-1387336_33	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-1387336_33	NF040522,COG2944	N/A	N/A	N/A	N/A
UniRef90	UHGV-1387336_35	UniRef90_A0A8D9PDQ3	78.2	3.45e-17	ECF sigma factor	N/A
structural_annotation	UHGV-1387336_35	PF04545,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-1387336_36	K08640	95.6	8.4e-28	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-1387336_36	phrog_18955	247.8	0	N/A	unknown function
UniRef90	UHGV-1387336_36	UniRef90_UPI001C1061EB	503.0	0	D-Ala-D-Ala carboxypeptidase family metallohydrolase	N/A
eggNOG-mapper	UHGV-1387336_36	1235797.C816_04171	485.0	0	Peptidase M15	N/A
Pfam	UHGV-1387336_36	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
Pfam	UHGV-1387336_36	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-1387336_36	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1387336_36	PF09992,PF08291,COG4632,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-1387336_37	phrog_1129	66.5	2.8e-19	holin	lysis
UniRef90	UHGV-1387336_37	UniRef90_A0A1C7FPV3	122.0	1.94e-34	Enolase	N/A
eggNOG-mapper	UHGV-1387336_37	1226322.HMPREF1545_00069	139.0	4.7504e-42	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1387336_37	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1387336_37	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1387336_38	phrog_18593	103.0	2.7e-30	N/A	unknown function
UniRef90	UHGV-1387336_38	UniRef90_A0A2Y9CAD1	146.0	8.67404e-43	Carbohydrate binding domain-containing protein	N/A
eggNOG-mapper	UHGV-1387336_38	552398.HMPREF0866_04507	86.3	2.12e-19	N/A	N/A
Pfam	UHGV-1387336_38	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-1387336_38	PF14600	N/A	N/A	N/A	N/A
KOfam	UHGV-1387336_41	K06236	111.7	4.2e-33	COL1A; collagen type I alpha	N/A
PHROG	UHGV-1387336_41	phrog_819	82.8	8.3e-37	tail protein	tail
eggNOG-mapper	UHGV-1387336_41	877414.ATWA01000062_gene1616	88.2	5.55e-16	N/A	N/A
Pfam	UHGV-1387336_41	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-1387336_41	PF10651,NF033814,COG5513	N/A	N/A	N/A	N/A
PHROG	UHGV-1387336_42	phrog_23092	60.1	2.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-1387336_42	1226322.HMPREF1545_02839	54.7	0.0000000331	N/A	N/A
PHROG	UHGV-1387336_43	phrog_937	49.8	0.000000000000062	hemolysin	other
eggNOG-mapper	UHGV-1387336_43	1519439.JPJG01000023_gene533	65.9	0.000000000000938	N/A	N/A
PHROG	UHGV-1387336_46	phrog_18725	91.9	6e-27	N/A	unknown function
eggNOG-mapper	UHGV-1387336_46	693746.OBV_18220	150.0	4.74003e-41	N/A	N/A
PHROG	UHGV-1387336_47	phrog_13879	236.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1387336_47	693746.OBV_18210	545.0	0	N/A	N/A
structural_annotation	UHGV-1387336_47	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-1387336_48	phrog_1194	61.2	1.6e-17	N/A	unknown function
eggNOG-mapper	UHGV-1387336_48	1226322.HMPREF1545_00060	238.0	0	N/A	N/A
structural_annotation	UHGV-1387336_48	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1387336_49	phrog_1535	72.5	5.70328e-43	tail length tape measure protein	tail
UniRef90	UHGV-1387336_49	UniRef90_A0A810PX76	145.0	6.85e-33	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1387336_49	1235797.C816_04182	293.0	0	SLT domain	N/A
COG	UHGV-1387336_49	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1387336_49	PF16789,TIGR02473	N/A	N/A	N/A	N/A
PHROG	UHGV-1387336_50	phrog_706	122.7	2.6e-36	N/A	unknown function
UniRef90	UHGV-1387336_50	UniRef90_UPI00164D7633	228.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1387336_50	693746.OBV_18170	223.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1387336_50	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1387336_50	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1387336_51	phrog_11299	70.0	3.8e-20	N/A	unknown function
eggNOG-mapper	UHGV-1387336_51	693746.OBV_18160	95.9	1.92e-23	N/A	N/A
structural_annotation	UHGV-1387336_51	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1387336_52	phrog_3099	96.3	3.4e-28	N/A	unknown function
eggNOG-mapper	UHGV-1387336_52	1226322.HMPREF1545_00056	252.0	0	N/A	N/A
structural_annotation	UHGV-1387336_52	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-1387336_53	phrog_3266	68.3	1e-19	tail completion	connector
eggNOG-mapper	UHGV-1387336_53	693746.OBV_18140	191.0	0	N/A	N/A
structural_annotation	UHGV-1387336_53	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1387336_54	phrog_556	61.4	1.3e-17	minor head protein	head and packaging
UniRef90	UHGV-1387336_54	UniRef90_UPI0006805998	141.0	3.82e-40	minor capsid protein	N/A
eggNOG-mapper	UHGV-1387336_54	642492.Clole_0824	55.5	0.000000118	Minor capsid protein	N/A
Pfam	UHGV-1387336_54	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1387336_54	PF11114	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1387336_55	PF20536,MF_01370,TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-1387336_56	phrog_541	54.6	0.0000000000000017	head-tail adaptor	connector
eggNOG-mapper	UHGV-1387336_56	693746.OBV_18110	105.0	5.57e-28	N/A	N/A
PHROG	UHGV-1387336_57	phrog_212	254.6	0	major head protein	head and packaging
UniRef90	UHGV-1387336_57	UniRef90_A0A354MR33	525.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1387336_57	1232449.BAHV02000010_gene2714	335.0	0	N/A	N/A
structural_annotation	UHGV-1387336_57	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1387336_58	phrog_194	92.5	5.7e-27	head scaffolding protein	head and packaging
UniRef90	UHGV-1387336_58	UniRef90_UPI00164D9F94	211.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1387336_58	693746.OBV_18080	158.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-1387336_58	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1387336_58	PF06810	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1387336_59	888060.HMPREF9081_0480	47.4	0.00000131	N/A	N/A
structural_annotation	UHGV-1387336_59	PF02699,MF_00369,TIGR00739,COG1862	N/A	N/A	N/A	N/A
PHROG	UHGV-1387336_60	phrog_581	233.1	0	minor head protein	head and packaging
UniRef90	UHGV-1387336_60	UniRef90_UPI0006814CA4	511.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1387336_60	693746.OBV_18050	687.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1387336_60	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-1387336_60	PF21814	N/A	N/A	N/A	DUF6883
COG	UHGV-1387336_60	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1387336_60	PF06152,PF12636	N/A	N/A	N/A	N/A
PHROG	UHGV-1387336_61	phrog_533	200.7	0	portal protein	head and packaging
UniRef90	UHGV-1387336_61	UniRef90_UPI000680A1DB	610.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1387336_61	693746.OBV_18040	434.0	0	N/A	N/A
structural_annotation	UHGV-1387336_61	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1387336_63	K06909	387.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1387336_63	phrog_3717	147.4	7.56701e-44	terminase large subunit	head and packaging
UniRef90	UHGV-1387336_63	UniRef90_UPI00164D9352	748.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1387336_63	665956.HMPREF1032_02957	578.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1387336_63	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1387336_63	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1387336_63	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1387336_63	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1387336_63	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1387336_64	phrog_2412	81.6	9.8e-24	N/A	unknown function
eggNOG-mapper	UHGV-1387336_64	742738.HMPREF9460_02504	143.0	1.47977e-42	N/A	N/A
PHROG	UHGV-1387336_65	phrog_36	96.7	2.2e-28	transcriptional regulator	transcription regulation
UniRef90	UHGV-1387336_65	UniRef90_A0A3D3FGT2	92.4	6.85e-21	Sigma70_r4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1387336_65	689781.AUJX01000031_gene120	84.0	2.18e-18	N/A	N/A
Pfam	UHGV-1387336_65	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
COG	UHGV-1387336_65	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A