UHGV-1389381 (vOTU-063679)

Viral Genome: UHGV-1389381

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1389381
vOTU ID	vOTU-063679
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0279747
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	97.95 (High-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9816
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	40.2
Jumbo phage	No

Genome content
Genome length (bp)	42,183
GC content	41.10%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	64
CDS density	91%
Average CDS length (bps)	598.17
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 97.95)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1389381_1	97139.C824_00161	57.0	0.00000000356	N/A	N/A
KOfam	UHGV-1389381_8	K18830	43.3	0.0000000000074	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1389381_8	phrog_8	50.1	0.000000000000062	transcriptional regulator	transcription regulation
UniRef90	UHGV-1389381_8	UniRef90_A0A8F9ZYT3	56.2	0.0000000424	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1389381_8	861455.HMPREF9184_01626	51.6	0.00000078	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-1389381_8	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1389381_8	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1389381_11	TIGR02869	N/A	N/A	N/A	N/A
PHROG	UHGV-1389381_12	phrog_6038	56.9	3.3e-16	N/A	unknown function
UniRef90	UHGV-1389381_13	UniRef90_A0A8D9PE04	191.0	0	Cyanate hydratase	N/A
PHROG	UHGV-1389381_17	phrog_1218	81.3	3.3e-25	exonuclease	DNA, RNA and nucleotide metabolism
Pfam	UHGV-1389381_17	PF12705	N/A	N/A	PD-(D/E)XK nuclease superfamily	PDDEXK_1
structural_annotation	UHGV-1389381_17	PF12705,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-1389381_18	phrog_124	109.4	4e-32	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1389381_18	UniRef90_A0A8D9PDX3	427.0	0	AAA domain protein	N/A
eggNOG-mapper	UHGV-1389381_18	1499967.BAYZ01000197_gene3023	64.3	0.0000000016	plasmid maintenance	N/A
Pfam	UHGV-1389381_18	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-1389381_18	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-1389381_18	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
KOfam	UHGV-1389381_19	K09125	119.5	3.5e-35	yhhQ; queuosine precursor transporter	N/A
PHROG	UHGV-1389381_19	phrog_4899	44.9	0.0000000000021	N/A	unknown function
UniRef90	UHGV-1389381_19	UniRef90_UPI000E3E4EB9	275.0	0	VUT family protein	N/A
eggNOG-mapper	UHGV-1389381_19	1504822.CCNO01000014_gene1279	276.0	0	queuosine salvage	N/A
Pfam	UHGV-1389381_19	PF02592	N/A	N/A	Putative vitamin uptake transporter	Vut_1
COG	UHGV-1389381_19	COG1738	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1389381_19	PF02592,MF_02088,TIGR00697,COG1738	N/A	N/A	N/A	N/A
KOfam	UHGV-1389381_20	K00059	130.5	1.4e-38	fabG, OAR1; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]	N/A
PHROG	UHGV-1389381_20	phrog_3142	76.0	3.6e-22	FabG-like 3-oxoacyl-(acyl-carrier-protein) reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1389381_20	UniRef90_UPI0013D2E343	242.0	0	SDR family oxidoreductase	N/A
eggNOG-mapper	UHGV-1389381_20	457412.RSAG_02088	221.0	0	Enoyl-(Acyl carrier protein) reductase	N/A
Pfam	UHGV-1389381_20	PF00106	N/A	N/A	short chain dehydrogenase	adh_short
COG	UHGV-1389381_20	COG1028	N/A	N/A	NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family	N/A
structural_annotation	UHGV-1389381_20	PF13561,MF_01647,NF005474,COG1028	N/A	N/A	N/A	N/A
PHROG	UHGV-1389381_21	phrog_3724	58.3	1.5e-16	N/A	unknown function
eggNOG-mapper	UHGV-1389381_21	1178540.BA70_16405	50.8	0.00000307	N/A	N/A
Pfam	UHGV-1389381_21	PF05037	N/A	N/A	N/A	DUF669
structural_annotation	UHGV-1389381_21	PF05037,NF011800	N/A	N/A	N/A	N/A
KOfam	UHGV-1389381_22	K02316	100.8	1.8e-30	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-1389381_22	phrog_18685	137.1	8.10007e-41	N/A	unknown function
UniRef90	UHGV-1389381_22	UniRef90_A0A8D9PDW5	1196.0	0	DNA directed DNA polymerase	N/A
eggNOG-mapper	UHGV-1389381_22	360911.EAT1b_0006	158.0	1.14e-36	DNA primase activity	N/A
PADLOC	UHGV-1389381_22	drt-cluster192	47.2	1.1e-22	DRT	DRT
Pfam	UHGV-1389381_22	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
Pfam	UHGV-1389381_22	PF13662	N/A	N/A	Toprim domain	Toprim_4
Pfam	UHGV-1389381_22	PF00493	N/A	N/A	MCM P-loop domain	MCM
COG	UHGV-1389381_22	COG1241	N/A	N/A	DNA replicative helicase MCM subunit Mcm2, Cdc46/Mcm family	N/A
structural_annotation	UHGV-1389381_22	PF00493,PF01807,PF13155,PF14947,MF_00974,MF_01314,NF040949,TIGR01391,COG1241	N/A	N/A	N/A	N/A
UniRef90	UHGV-1389381_23	UniRef90_A0A8D9UHA8	104.0	1.37e-27	AspA family protein	N/A
structural_annotation	UHGV-1389381_23	PF21100,MF_01911,NF040642,COG0640	N/A	N/A	N/A	N/A
PHROG	UHGV-1389381_24	phrog_229	57.7	2.9e-16	MazG-like pyrophosphatase	other
UniRef90	UHGV-1389381_24	UniRef90_A0A7C6S799	94.0	1.3e-22	Nucleoside triphosphate pyrophosphohydrolase family protein	N/A
eggNOG-mapper	UHGV-1389381_24	445335.CBN_1365	68.6	0.000000000000143	MazG nucleotide pyrophosphohydrolase domain	N/A
Pfam	UHGV-1389381_24	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-1389381_24	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-1389381_24	PF01503,MF_01020,TIGR03188,COG0140	N/A	N/A	N/A	N/A
PHROG	UHGV-1389381_25	phrog_236	95.9	8.5e-28	nucleotide kinase	other
UniRef90	UHGV-1389381_25	UniRef90_UPI000CBEDF51	92.8	8.74e-22	N/A	N/A
eggNOG-mapper	UHGV-1389381_25	1117108.PAALTS15_09970	77.4	0.0000000000000012	N/A	N/A
Pfam	UHGV-1389381_25	PF11753	N/A	N/A	N/A	DUF3310
PHROG	UHGV-1389381_26	phrog_19058	160.5	0	N/A	unknown function
UniRef90	UHGV-1389381_26	UniRef90_A0A7T8IX45	265.0	0	DNA guanine transglycosylase	N/A
eggNOG-mapper	UHGV-1389381_26	47716.JOFH01000038_gene1963	68.6	0.000000000121	N/A	N/A
structural_annotation	UHGV-1389381_26	PF20314,MF_00168,TIGR00449,COG0343	N/A	N/A	N/A	N/A
Pfam	UHGV-1389381_27	PF00551	N/A	N/A	Formyl transferase	Formyl_trans_N
COG	UHGV-1389381_27	COG0299	N/A	N/A	Folate-dependent phosphoribosylglycinamide formyltransferase PurN	N/A
structural_annotation	UHGV-1389381_27	PF00551,MF_01930,TIGR00655,COG0299	N/A	N/A	N/A	N/A
KOfam	UHGV-1389381_28	K02335	379.3	0	polA; DNA polymerase I [EC:2.7.7.7]	N/A
PHROG	UHGV-1389381_28	phrog_17	378.6	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1389381_28	UniRef90_A0A7C6W992	952.0	0	DNA polymerase I	N/A
eggNOG-mapper	UHGV-1389381_28	935948.KE386495_gene2287	253.0	0	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity	N/A
PADLOC	UHGV-1389381_28	drt-cluster58	93.7	3.1e-27	DRT	DRT
Pfam	UHGV-1389381_28	PF01612	N/A	N/A	3'-5' exonuclease	DNA_pol_A_exo1
Pfam	UHGV-1389381_28	PF00476	N/A	N/A	DNA polymerase family A	DNA_pol_A
COG	UHGV-1389381_28	COG0749	N/A	N/A	DNA polymerase I, 3'-5' exonuclease and polymerase domains	N/A
structural_annotation	UHGV-1389381_28	PF00476,PF01612,MF_04101,NF004397,COG0749	N/A	N/A	N/A	N/A
KOfam	UHGV-1389381_29	K14440	186.0	0	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-1389381_29	phrog_62	287.2	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1389381_29	UniRef90_A0A7C6S767	461.0	0	DEAD/DEAH box helicase	N/A
eggNOG-mapper	UHGV-1389381_29	871584.D9ZNF7_9CAUD	129.0	2.08e-29	helicase activity	N/A
PADLOC	UHGV-1389381_29	ZorD1_00007	111.2	1.1e-32	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-1389381_29	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-1389381_29	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
structural_annotation	UHGV-1389381_29	PF00176,PF00271,MF_01821,NF041790,COG0553	N/A	N/A	N/A	N/A
UniRef90	UHGV-1389381_31	UniRef90_A0A8D9PDZ3	181.0	0	Holliday junction resolvase	N/A
structural_annotation	UHGV-1389381_31	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1389381_32	445972.ANACOL_01884	55.8	0.0000000262	N/A	N/A
PHROG	UHGV-1389381_34	phrog_16490	89.7	3.8e-26	N/A	unknown function
eggNOG-mapper	UHGV-1389381_34	1408437.JNJN01000043_gene803	114.0	1.89e-28	N/A	N/A
PHROG	UHGV-1389381_35	phrog_22984	50.0	0.000000000000062	N/A	unknown function
UniRef90	UHGV-1389381_36	UniRef90_A0A8D9PDT7	127.0	1.12e-36	Membrane fusogenic activity protein	N/A
UniRef90	UHGV-1389381_38	UniRef90_A0A6P1MDZ1	202.0	0	Peptidase_C39_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1389381_38	397291.C804_01109	198.0	0	Phage lysozyme	N/A
Pfam	UHGV-1389381_38	PF13529	N/A	N/A	Peptidase_C39 like family	Peptidase_C39_2
COG	UHGV-1389381_38	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
structural_annotation	UHGV-1389381_38	PF03412,COG4990	N/A	N/A	N/A	N/A
PHROG	UHGV-1389381_39	phrog_9428	73.1	2.9e-21	N/A	unknown function
UniRef90	UHGV-1389381_39	UniRef90_A0A316LVP0	52.4	0.00000229	Serine/threonine protein kinase	N/A
eggNOG-mapper	UHGV-1389381_39	411483.FAEPRAA2165_01925	50.1	0.00000315	N/A	N/A
PHROG	UHGV-1389381_40	phrog_13256	56.0	4.9e-16	N/A	unknown function
eggNOG-mapper	UHGV-1389381_40	871968.DESME_08815	50.4	0.000000189	N/A	N/A
PHROG	UHGV-1389381_44	phrog_863	64.7	2.5e-19	tail fiber assembly	tail
eggNOG-mapper	UHGV-1389381_44	1232449.BAHV02000010_gene2732	68.9	0.0000000000512	N/A	N/A
Pfam	UHGV-1389381_44	PF21722	N/A	N/A	Glycine-rich domain	Gly_rich_2
structural_annotation	UHGV-1389381_44	PF21722	N/A	N/A	N/A	N/A
PHROG	UHGV-1389381_46	phrog_18725	48.6	0.00000000000015	N/A	unknown function
PHROG	UHGV-1389381_47	phrog_13879	319.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1389381_47	742740.HMPREF9474_03516	119.0	4.04e-25	N/A	N/A
structural_annotation	UHGV-1389381_47	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-1389381_48	phrog_1194	74.9	8.6e-22	N/A	unknown function
eggNOG-mapper	UHGV-1389381_48	585501.HMPREF6123_0824	95.5	1.23e-23	N/A	N/A
Pfam	UHGV-1389381_48	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1389381_48	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1389381_49	phrog_1535	148.2	0	tail length tape measure protein	tail
UniRef90	UHGV-1389381_49	UniRef90_A0A8D9PDW4	394.0	0	Minor tail protein	N/A
eggNOG-mapper	UHGV-1389381_49	445972.ANACOL_01854	207.0	0	tape measure	N/A
COG	UHGV-1389381_49	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
structural_annotation	UHGV-1389381_49	PF09325	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1389381_51	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1389381_52	phrog_1407	66.3	4.5e-19	major tail protein	tail
UniRef90	UHGV-1389381_52	UniRef90_A0A8D9UH75	217.0	0	Major tail protein	N/A
eggNOG-mapper	UHGV-1389381_52	398512.JQKC01000005_gene5456	62.8	0.000000000106	N/A	N/A
Pfam	UHGV-1389381_52	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
structural_annotation	UHGV-1389381_52	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
Pfam	UHGV-1389381_53	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1389381_53	PF12691	N/A	N/A	N/A	N/A
UniRef90	UHGV-1389381_54	UniRef90_A0A8D9PDS5	147.0	2.84464e-43	Minor capsid protein	N/A
structural_annotation	UHGV-1389381_54	PF11114,TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1389381_55	PF10665,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1389381_56	phrog_477	48.7	0.00000000000011	head-tail adaptor Ad1	connector
UniRef90	UHGV-1389381_56	UniRef90_A0A8D9UHB0	139.0	4.38e-39	Putative head tail connector protein	N/A
eggNOG-mapper	UHGV-1389381_56	760568.Desku_1116	59.7	0.00000000516	N/A	N/A
Pfam	UHGV-1389381_56	PF20557	N/A	N/A	Putative DnaT-like ssDNA binding protein	DnaT_2
structural_annotation	UHGV-1389381_56	PF20557	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1389381_57	1469948.JPNB01000003_gene91	59.3	0.0000000361	S-layer homology domain	N/A
COG	UHGV-1389381_57	COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-1389381_58	phrog_422	236.7	0	major head protein	head and packaging
UniRef90	UHGV-1389381_58	UniRef90_A0A3P6K1X9	258.0	0	Lj928 prophage protein	N/A
eggNOG-mapper	UHGV-1389381_58	1415774.U728_722	261.0	0	N/A	N/A
structural_annotation	UHGV-1389381_58	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1389381_59	phrog_194	85.4	8.8e-26	head scaffolding protein	head and packaging
UniRef90	UHGV-1389381_59	UniRef90_A0A8D9PDR7	103.0	6.19e-24	Minor structural protein	N/A
eggNOG-mapper	UHGV-1389381_59	1294142.CINTURNW_1028	60.8	0.0000000112	Phage minor structural protein GP20	N/A
Pfam	UHGV-1389381_59	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1389381_59	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1389381_60	phrog_533	82.6	2.3e-24	portal protein	head and packaging
UniRef90	UHGV-1389381_60	UniRef90_A0A8D9PDR4	606.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1389381_60	86416.Clopa_2538	259.0	0	PFAM Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1389381_60	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1389381_60	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1389381_61	K06909	138.0	8.39994e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1389381_61	phrog_10250	141.1	5.09933e-42	N/A	unknown function
UniRef90	UHGV-1389381_61	UniRef90_A0A8D9PDX0	700.0	0	Large terminase	N/A
eggNOG-mapper	UHGV-1389381_61	1329516.JPST01000014_gene657	335.0	0	Phage terminase, large subunit	N/A
Pfam	UHGV-1389381_61	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-1389381_61	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1389381_61	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1389381_61	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1389381_64	PF13973,TIGR00739,COG4481	N/A	N/A	N/A	N/A