UHGV-1390631 (vOTU-034170)

Viral Genome: UHGV-1390631

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1390631
vOTU ID	vOTU-034170
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0213764
Associated BioSample	SAMN05414981
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	71.14 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	7
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9825
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	8.56
Jumbo phage	No

Genome content
Genome length (bp)	30,432
GC content	55.86%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	33
CDS density	95%
Average CDS length (bps)	875.64
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 71.14)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1390631_6	K06909	131.2	9e-39	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1390631_6	phrog_979	128.1	8.99999e-40	terminase large subunit	head and packaging
UniRef90	UHGV-1390631_6	UniRef90_A0A3D5TIM8	633.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-1390631_6	1410650.JHWL01000003_gene2834	612.0	0	N/A	N/A
Pfam	UHGV-1390631_6	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1390631_6	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1390631_6	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1390631_7	phrog_156	324.2	0	portal protein	head and packaging
eggNOG-mapper	UHGV-1390631_7	1410650.JHWL01000003_gene2833	572.0	0	N/A	N/A
structural_annotation	UHGV-1390631_7	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
KOfam	UHGV-1390631_8	K07584	42.0	0.000000000015	N/A	N/A
PHROG	UHGV-1390631_8	phrog_4478	52.5	0.0000000000000059	peptidase	other
eggNOG-mapper	UHGV-1390631_8	1231377.C426_1790	53.1	0.000000253	Pfam:Peptidase_C108	N/A
Pfam	UHGV-1390631_8	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-1390631_8	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1390631_8	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-1390631_9	phrog_13908	226.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1390631_9	1410650.JHWL01000003_gene2831	98.2	5.74e-21	N/A	N/A
PHROG	UHGV-1390631_10	phrog_1357	268.9	0	major head protein	head and packaging
UniRef90	UHGV-1390631_10	UniRef90_A0A2V2GQW4	381.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1390631_10	748224.HMPREF9436_02545	349.0	0	N/A	N/A
NCBIFam	UHGV-1390631_10	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1390631_10	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1390631_11	phrog_15239	50.7	0.000000000000028	N/A	unknown function
PHROG	UHGV-1390631_12	phrog_12105	120.1	1e-35	N/A	unknown function
eggNOG-mapper	UHGV-1390631_12	1226322.HMPREF1545_03850	65.9	0.00000000000426	N/A	N/A
PHROG	UHGV-1390631_13	phrog_511	204.4	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1390631_13	1410650.JHWL01000003_gene2827	302.0	0	N/A	N/A
structural_annotation	UHGV-1390631_13	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-1390631_16	phrog_15594	45.9	0.00000000000092	N/A	unknown function
structural_annotation	UHGV-1390631_16	PF16640,TIGR04488	N/A	N/A	N/A	N/A
PHROG	UHGV-1390631_18	phrog_24103	79.9	3.8e-23	N/A	unknown function
eggNOG-mapper	UHGV-1390631_18	1118055.CAGU01000013_gene761	83.6	7.61e-17	N/A	N/A
eggNOG-mapper	UHGV-1390631_19	411473.RUMCAL_00420	57.8	0.00000342	nuclear chromosome segregation	N/A
COG	UHGV-1390631_19	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1390631_20	PF03425,NF038128,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-1390631_22	phrog_2310	50.9	0.000000000000012	N/A	unknown function
eggNOG-mapper	UHGV-1390631_22	1151292.QEW_0364	48.5	0.000000766	N/A	N/A
eggNOG-mapper	UHGV-1390631_23	1410650.JHWL01000003_gene2815	110.0	1.01e-24	N/A	N/A
PHROG	UHGV-1390631_24	phrog_22978	736.7	0	N/A	unknown function
UniRef90	UHGV-1390631_24	UniRef90_R5G452	346.0	0	PBECR5 domain-containing protein	N/A
eggNOG-mapper	UHGV-1390631_24	585503.HMPREF7545_1744	121.0	4.26e-24	N/A	N/A
Pfam	UHGV-1390631_24	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
Pfam	UHGV-1390631_24	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
KOfam	UHGV-1390631_25	K08640	85.5	1.9e-25	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-1390631_25	phrog_2649	59.7	1.9e-19	endolysin	lysis
UniRef90	UHGV-1390631_25	UniRef90_UPI001C12323B	214.0	0	D-Ala-D-Ala carboxypeptidase family metallohydrolase	N/A
eggNOG-mapper	UHGV-1390631_25	903814.ELI_3889	68.6	0.0000000000119	Peptidase M15	N/A
Pfam	UHGV-1390631_25	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-1390631_25	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-1390631_25	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1390631_25	PF08291,PF01471,TIGR02869,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-1390631_26	phrog_4105	103.8	9.3e-31	N/A	unknown function
UniRef90	UHGV-1390631_26	UniRef90_A0A8D9UHA9	128.0	1.14e-36	Holin protein	N/A
eggNOG-mapper	UHGV-1390631_26	742733.HMPREF9469_05011	138.0	2.42004e-41	N/A	N/A
PHROG	UHGV-1390631_27	phrog_1129	84.9	5.1e-25	holin	lysis
UniRef90	UHGV-1390631_27	UniRef90_A0A316A1J8	106.0	2.33e-28	Holin family Hol44 protein (Superfamily V)	N/A
eggNOG-mapper	UHGV-1390631_27	1256908.HMPREF0373_00463	95.9	6.97e-25	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1390631_27	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1390631_27	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1390631_28	phrog_3754	96.7	2.2e-28	N/A	unknown function
eggNOG-mapper	UHGV-1390631_28	476272.RUMHYD_01764	153.0	0	N/A	N/A
PHROG	UHGV-1390631_29	phrog_21718	78.0	1.1e-22	N/A	unknown function
eggNOG-mapper	UHGV-1390631_29	476272.RUMHYD_01768	80.9	7.27e-18	N/A	N/A
PHROG	UHGV-1390631_30	phrog_22984	68.5	8.6e-20	N/A	unknown function
PHROG	UHGV-1390631_31	phrog_16490	107.0	2e-31	N/A	unknown function
eggNOG-mapper	UHGV-1390631_31	1408437.JNJN01000043_gene803	94.4	1.48e-20	N/A	N/A
PHROG	UHGV-1390631_32	phrog_20016	166.8	0	N/A	unknown function
UniRef90	UHGV-1390631_32	UniRef90_A0A2Z4QB67	149.0	1.30321e-43	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-1390631_32	1226322.HMPREF1545_00077	142.0	1.24996e-41	N/A	N/A
structural_annotation	UHGV-1390631_32	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1390631_33	PF12510	N/A	N/A	N/A	N/A