UHGV-1392798 (vOTU-116906)

Viral Genome: UHGV-1392798

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1392798
vOTU ID	vOTU-116906
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0261928
Associated BioSample	SAMEA2737745
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	79.2 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9742
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	31.84
Jumbo phage	No

Genome content
Genome length (bp)	38,793
GC content	48.24%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	60
CDS density	86%
Average CDS length (bps)	555.40
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 79.2)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1392798_1	phrog_419	114.8	8.3e-34	N/A	unknown function
UniRef90	UHGV-1392798_1	UniRef90_A0A060QMU0	102.0	8.67e-27	N/A	N/A
eggNOG-mapper	UHGV-1392798_1	1123312.KB904569_gene346	107.0	7.31e-30	N/A	N/A
structural_annotation	UHGV-1392798_1	PF14083	N/A	N/A	N/A	N/A
KOfam	UHGV-1392798_2	K07474	129.2	5.3e-38	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1392798_2	phrog_51	117.3	1e-34	terminase small subunit	head and packaging
UniRef90	UHGV-1392798_2	UniRef90_A0A658JX60	162.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1392798_2	665942.HMPREF1022_02667	106.0	6.36e-27	PFAM Terminase small subunit	N/A
Pfam	UHGV-1392798_2	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1392798_2	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1392798_2	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1392798_3	K06909	82.1	6.7e-24	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1392798_3	phrog_10250	133.7	7.4e-40	N/A	unknown function
UniRef90	UHGV-1392798_3	UniRef90_E2ZNR1	513.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-1392798_3	748224.HMPREF9436_03341	513.0	0	Phage terminase, large subunit, PBSX family	N/A
NCBIFam	UHGV-1392798_3	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1392798_3	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1392798_3	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1392798_4	phrog_533	356.0	0	portal protein	head and packaging
UniRef90	UHGV-1392798_4	UniRef90_A0A417HAG6	773.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1392798_4	1232443.BAIA02000078_gene36	371.0	0	N/A	N/A
Pfam	UHGV-1392798_4	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1392798_4	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1392798_5	phrog_9479	168.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1392798_5	511680.BUTYVIB_01226	65.1	0.0000000000111	N/A	N/A
structural_annotation	UHGV-1392798_5	PF15529	N/A	N/A	N/A	N/A
PHROG	UHGV-1392798_6	phrog_8680	222.6	0	N/A	unknown function
UniRef90	UHGV-1392798_6	UniRef90_A0A413TTC4	239.0	0	N/A	N/A
eggNOG-mapper	UHGV-1392798_6	411470.RUMGNA_02208	210.0	0	N/A	N/A
Pfam	UHGV-1392798_6	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-1392798_6	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-1392798_7	phrog_194	95.5	6.7e-28	head scaffolding protein	head and packaging
UniRef90	UHGV-1392798_7	UniRef90_A0A2Z4Q9Y8	139.0	3.14e-38	Minor structural protein	N/A
eggNOG-mapper	UHGV-1392798_7	1232443.BAIA02000078_gene31	128.0	4.9e-35	N/A	N/A
Pfam	UHGV-1392798_7	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1392798_7	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1392798_8	phrog_909	68.1	1e-19	major head protein	head and packaging
UniRef90	UHGV-1392798_8	UniRef90_K1TUL5	72.4	0.0000000000000564	N/A	N/A
eggNOG-mapper	UHGV-1392798_8	1536772.R70723_06665	64.3	0.00000000001	N/A	N/A
structural_annotation	UHGV-1392798_8	PF02924	N/A	N/A	N/A	N/A
PHROG	UHGV-1392798_9	phrog_29	174.0	0	major head protein	head and packaging
UniRef90	UHGV-1392798_9	UniRef90_UPI0004AE1FFD	358.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-1392798_9	1232443.BAIA02000078_gene29	358.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1392798_9	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1392798_9	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1392798_10	phrog_541	91.7	6.6e-27	head-tail adaptor	connector
eggNOG-mapper	UHGV-1392798_10	1120998.AUFC01000030_gene2237	60.8	0.000000000326	N/A	N/A
PHROG	UHGV-1392798_11	phrog_581	271.5	0	minor head protein	head and packaging
UniRef90	UHGV-1392798_11	UniRef90_UPI0006C77A91	598.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1392798_11	1226322.HMPREF1545_00046	268.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1392798_11	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1392798_11	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1392798_11	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1392798_12	phrog_3366	55.0	4.1e-16	N/A	unknown function
structural_annotation	UHGV-1392798_12	PF20536,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1392798_13	phrog_556	71.4	1.2e-20	minor head protein	head and packaging
UniRef90	UHGV-1392798_13	UniRef90_UPI0006C7F62A	259.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1392798_13	1226322.HMPREF1545_00054	124.0	9.32e-35	Minor capsid protein	N/A
Pfam	UHGV-1392798_13	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1392798_13	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1392798_14	phrog_3266	55.0	0.0000000000000011	tail completion	connector
eggNOG-mapper	UHGV-1392798_14	1232443.BAIA02000078_gene24	115.0	3.82e-31	N/A	N/A
structural_annotation	UHGV-1392798_14	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1392798_15	phrog_3099	126.5	1.7e-37	N/A	unknown function
eggNOG-mapper	UHGV-1392798_15	645991.Sgly_0346	99.8	3.4e-24	N/A	N/A
structural_annotation	UHGV-1392798_15	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1392798_16	phrog_11299	53.8	0.0000000000000036	N/A	unknown function
UniRef90	UHGV-1392798_16	UniRef90_A0A2Z4QA03	94.0	5.15e-22	Tail assembly chaperone protein	N/A
eggNOG-mapper	UHGV-1392798_16	1120746.CCNL01000014_gene2103	95.1	3.05e-23	N/A	N/A
structural_annotation	UHGV-1392798_16	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1392798_17	phrog_706	105.5	4.9e-31	N/A	unknown function
UniRef90	UHGV-1392798_17	UniRef90_UPI00164ABC94	365.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1392798_17	663278.Ethha_0489	115.0	9e-30	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1392798_17	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1392798_17	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1392798_18	phrog_1535	333.1	0	tail length tape measure protein	tail
UniRef90	UHGV-1392798_18	UniRef90_A0A1C5N801	375.0	0	ATPase involved in DNA repair	N/A
eggNOG-mapper	UHGV-1392798_18	1158612.I580_01921	133.0	1.02e-28	SLT domain	N/A
COG	UHGV-1392798_18	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-1392798_19	phrog_1194	64.6	1.5e-18	N/A	unknown function
eggNOG-mapper	UHGV-1392798_19	1120998.AUFC01000030_gene2246	101.0	1.27e-24	N/A	N/A
structural_annotation	UHGV-1392798_19	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1392798_20	phrog_32744	673.4	0	N/A	unknown function
eggNOG-mapper	UHGV-1392798_20	1120998.AUFC01000030_gene2247	258.0	0	N/A	N/A
structural_annotation	UHGV-1392798_20	PF14594,PF21722,NF033848,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1392798_22	PF10651,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-1392798_24	phrog_10898	268.5	0	N/A	unknown function
UniRef90	UHGV-1392798_24	UniRef90_A0A7U3NJT3	186.0	0	Putative Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1392798_24	1347368.HG964403_gene4490	58.9	0.000000273	S-layer homology domain	N/A
COG	UHGV-1392798_24	COG4632	N/A	N/A	Sugar-P-sugar glycosidase (uncovering enzyme, UCE), NAGPA superfamily	N/A
structural_annotation	UHGV-1392798_24	PF19081,PF15418,MF_01905,NF032891,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-1392798_25	phrog_17347	42.7	0.0000000000082	N/A	unknown function
structural_annotation	UHGV-1392798_25	PF16408,NF033510	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1392798_28	PF18975,MF_01605,NF033206,COG4257	N/A	N/A	N/A	N/A
PHROG	UHGV-1392798_29	phrog_22773	56.4	5.5e-16	N/A	unknown function
UniRef90	UHGV-1392798_29	UniRef90_A0A8J6JIT9	62.0	0.00000000012	Toxin-antitoxin system toxin subunit	N/A
eggNOG-mapper	UHGV-1392798_29	742738.HMPREF9460_02535	49.7	0.00000236	N/A	N/A
UniRef90	UHGV-1392798_30	UniRef90_A0A8J6JAX9	47.8	0.00000375	XkdX family protein	N/A
Pfam	UHGV-1392798_30	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-1392798_30	PF09693,TIGR01669	N/A	N/A	N/A	N/A
KOfam	UHGV-1392798_31	K13277	67.2	1.9e-19	epr; minor extracellular protease Epr [EC:3.4.21.-]	N/A
UniRef90	UHGV-1392798_31	UniRef90_UPI00164A3975	419.0	0	S8 family serine peptidase	N/A
Pfam	UHGV-1392798_31	PF00082	N/A	N/A	Subtilase family	Peptidase_S8
Pfam	UHGV-1392798_31	PF00395	N/A	N/A	S-layer homology domain	SLH
COG	UHGV-1392798_31	COG1404	N/A	N/A	Serine protease, subtilisin family	N/A
structural_annotation	UHGV-1392798_31	PF00395,TIGR03921,COG1404	N/A	N/A	N/A	N/A
PHROG	UHGV-1392798_32	phrog_937	50.5	0.0000000000000091	hemolysin	other
eggNOG-mapper	UHGV-1392798_32	445972.ANACOL_03381	93.6	2.28e-23	N/A	N/A
PHROG	UHGV-1392798_33	phrog_1129	68.9	5.4e-20	holin	lysis
UniRef90	UHGV-1392798_33	UniRef90_UPI000B35DBBB	130.0	5.63e-38	phage holin family protein	N/A
eggNOG-mapper	UHGV-1392798_33	1226322.HMPREF1545_00069	112.0	3.03e-31	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1392798_33	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1392798_33	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1392798_34	phrog_9589	115.1	7.2e-34	endolysin	lysis
UniRef90	UHGV-1392798_34	UniRef90_UPI00164A5C85	390.0	0	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-1392798_34	1123075.AUDP01000020_gene1533	140.0	5.81e-36	pathogenesis	N/A
Pfam	UHGV-1392798_34	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-1392798_34	COG3942	N/A	N/A	Surface antigen	N/A
structural_annotation	UHGV-1392798_34	PF00877,TIGR02594	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1392798_35	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1392798_37	1408437.JNJN01000043_gene805	147.0	3.08286e-44	N/A	N/A
PHROG	UHGV-1392798_39	phrog_16490	257.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1392798_39	1408437.JNJN01000043_gene803	338.0	0	N/A	N/A
eggNOG-mapper	UHGV-1392798_40	1408437.JNJN01000043_gene802	177.0	0	N/A	N/A
eggNOG-mapper	UHGV-1392798_41	1378168.N510_03079	132.0	1.04e-34	N/A	N/A
KOfam	UHGV-1392798_42	K14059	203.5	0	int; integrase	N/A
PHROG	UHGV-1392798_42	phrog_1	206.2	0	integrase	integration and excision
UniRef90	UHGV-1392798_42	UniRef90_A0A417HS27	444.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-1392798_42	1321814.HMPREF9089_00905	220.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-1392798_42	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1392798_42	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1392798_42	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1392798_42	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1392798_43	phrog_2158	208.9	0	abortive infection resistance protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1392798_43	UniRef90_A0A410PX10	335.0	0	Abi family protein	N/A
eggNOG-mapper	UHGV-1392798_43	555088.DealDRAFT_1119	231.0	0	Abi-like protein	N/A
PADLOC	UHGV-1392798_43	AbiD	283.4	0	AbiD	Abi
Pfam	UHGV-1392798_43	PF07751	N/A	N/A	Abi-like protein	Abi_2
COG	UHGV-1392798_43	COG4823	N/A	N/A	Abortive infection bacteriophage resistance protein	N/A
structural_annotation	UHGV-1392798_43	PF07751,COG4823	N/A	N/A	N/A	N/A
KOfam	UHGV-1392798_44	K19370	44.1	0.0000000000021	DNAJC22; DnaJ homolog subfamily C member 22	N/A
PHROG	UHGV-1392798_44	phrog_10292	67.8	9.1e-20	N/A	unknown function
UniRef90	UHGV-1392798_44	UniRef90_UPI0009EA0767	242.0	0	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1392798_44	428125.CLOLEP_03735	97.1	1.73e-24	TM2 domain	N/A
Pfam	UHGV-1392798_44	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-1392798_44	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-1392798_44	COG2314	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1392798_44	PF05154,PF12773,MF_00788,NF003161	N/A	N/A	N/A	N/A
PHROG	UHGV-1392798_45	phrog_37750	68.8	5.2e-20	N/A	unknown function
UniRef90	UHGV-1392798_45	UniRef90_UPI001A9AF75F	453.0	0	N/A	N/A
eggNOG-mapper	UHGV-1392798_45	1087481.AGFX01000037_gene4346	86.3	3.32e-19	N/A	N/A
Pfam	UHGV-1392798_45	PF12978	N/A	N/A	N/A	DUF3862
PHROG	UHGV-1392798_46	phrog_31229	99.7	1.7e-29	N/A	unknown function
eggNOG-mapper	UHGV-1392798_46	1408437.JNJN01000047_gene709	134.0	2.31e-37	N/A	N/A
KOfam	UHGV-1392798_48	K18830	61.0	3e-17	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1392798_48	phrog_8	52.8	0.0000000000000071	transcriptional regulator	transcription regulation
UniRef90	UHGV-1392798_48	UniRef90_A0A1C6CFH8	233.0	0	Putative zinc finger/helix-turn-helix protein, YgiT family	N/A
eggNOG-mapper	UHGV-1392798_48	903814.ELI_1263	139.0	6.56004e-41	Helix-turn-helix domain	N/A
Pfam	UHGV-1392798_48	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1392798_48	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1392798_48	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1392798_57	phrog_1486	50.5	0.000000000000039	membrane protein	moron, auxiliary metabolic gene and host takeover
structural_annotation	UHGV-1392798_59	COG3311	N/A	N/A	N/A	N/A