UHGV-1393413 (vOTU-147617)

Viral Genome: UHGV-1393413

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1393413
vOTU ID	vOTU-147617
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0128380
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	53.68 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	19
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9808
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	39.68
Jumbo phage	No

Genome content
Genome length (bp)	18,041
GC content	38.66%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	23
CDS density	97%
Average CDS length (bps)	764.35
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 53.68)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1393413_1	1321820.HMPREF1983_00937	97.1	1.4e-22	Phage portal protein, SPP1 Gp6-like	N/A
PHROG	UHGV-1393413_2	phrog_7104	439.0	0	N/A	unknown function
UniRef90	UHGV-1393413_2	UniRef90_Q7Y4I9	364.0	0	Gp35	N/A
eggNOG-mapper	UHGV-1393413_2	585203.SMSK564_1288	410.0	0	N/A	N/A
PHROG	UHGV-1393413_4	phrog_14725	191.4	0	N/A	unknown function
structural_annotation	UHGV-1393413_4	PF10922	N/A	N/A	N/A	N/A
PHROG	UHGV-1393413_5	phrog_17688	507.0	0	N/A	unknown function
UniRef90	UHGV-1393413_5	UniRef90_Q7Y4I6	924.0	0	Gp38	N/A
eggNOG-mapper	UHGV-1393413_5	768726.HMPREF9178_1065	941.0	0	phage terminase, large subunit	N/A
COG	UHGV-1393413_5	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1393413_5	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1393413_6	phrog_36217	151.0	2.8026e-45	N/A	unknown function
UniRef90	UHGV-1393413_6	UniRef90_UPI001BD9C4CD	263.0	0	N/A	N/A
eggNOG-mapper	UHGV-1393413_6	768726.HMPREF9178_1064	217.0	0	N/A	N/A
Pfam	UHGV-1393413_6	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1393413_6	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1393413_7	phrog_32396	157.7	0	N/A	unknown function
UniRef90	UHGV-1393413_7	UniRef90_A0A4U9YET5	579.0	0	Phage, major head protein	N/A
eggNOG-mapper	UHGV-1393413_7	1289598.M1PFL0_9CAUD	427.0	0	N-acetylmuramoyl-L-alanine amidase activity	N/A
Pfam	UHGV-1393413_7	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
structural_annotation	UHGV-1393413_7	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1393413_8	phrog_1539	75.0	8.3e-22	Arc-like repressor	transcription regulation
UniRef90	UHGV-1393413_8	UniRef90_A0A559GX15	132.0	4.68e-39	HeH domain-containing protein	N/A
Pfam	UHGV-1393413_8	PF12949	N/A	N/A	HeH/LEM domain	HeH
structural_annotation	UHGV-1393413_8	PF12949	N/A	N/A	N/A	N/A
PHROG	UHGV-1393413_9	phrog_137	136.0	1.10001e-40	head-tail adaptor Ad1	connector
UniRef90	UHGV-1393413_9	UniRef90_Q7Y4I2	240.0	0	Gp42	N/A
eggNOG-mapper	UHGV-1393413_9	768726.HMPREF9178_1061	241.0	0	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-1393413_9	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-1393413_9	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-1393413_10	phrog_501	108.0	5.6e-32	head closure Hc1	connector
UniRef90	UHGV-1393413_10	UniRef90_Q7Y4I1	223.0	0	Gp43	N/A
eggNOG-mapper	UHGV-1393413_10	157924.Q7Y4I1_9CAUD	223.0	0	N/A	N/A
structural_annotation	UHGV-1393413_10	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1393413_11	phrog_387	85.0	5.8e-25	neck protein	connector
UniRef90	UHGV-1393413_11	UniRef90_Q7Y4I0	145.0	4.76441e-44	Gp44	N/A
eggNOG-mapper	UHGV-1393413_11	768726.HMPREF9178_1059	145.0	5.60519e-45	N/A	N/A
PHROG	UHGV-1393413_12	phrog_123	65.7	7.8e-19	tail terminator	connector
UniRef90	UHGV-1393413_12	UniRef90_Q7Y4H9	218.0	0	Gp45	N/A
eggNOG-mapper	UHGV-1393413_12	768726.HMPREF9178_1058	218.0	0	N/A	N/A
structural_annotation	UHGV-1393413_12	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-1393413_13	phrog_117	174.6	0	major tail protein	tail
UniRef90	UHGV-1393413_13	UniRef90_UPI0011E65AA4	295.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1393413_13	768726.HMPREF9178_1057	340.0	0	domain, Protein	N/A
COG	UHGV-1393413_13	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1393413_13	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1393413_14	phrog_1526	112.1	2e-33	N/A	unknown function
UniRef90	UHGV-1393413_14	UniRef90_A0A139NAV4	118.0	2.3e-32	N/A	N/A
eggNOG-mapper	UHGV-1393413_14	157924.Q9F4J5_9CAUD	187.0	0	N/A	N/A
PHROG	UHGV-1393413_15	phrog_1633	178.7	0	N/A	unknown function
UniRef90	UHGV-1393413_15	UniRef90_UPI00094E4BA3	241.0	0	N/A	N/A
eggNOG-mapper	UHGV-1393413_15	157924.Q9F4J4_9CAUD	216.0	0	N/A	N/A
Pfam	UHGV-1393413_15	PF17318	N/A	N/A	N/A	DUF5361
structural_annotation	UHGV-1393413_15	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-1393413_16	phrog_58	379.2	0	tail length tape measure protein	tail
UniRef90	UHGV-1393413_16	UniRef90_Q9F4J3	1065.0	0	PblA	N/A
eggNOG-mapper	UHGV-1393413_16	157924.Q9F4J3_9CAUD	1065.0	0	peptidoglycan catabolic process	N/A
structural_annotation	UHGV-1393413_16	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-1393413_17	phrog_33	58.5	1.8e-16	distal tail protein Dit	tail
UniRef90	UHGV-1393413_17	UniRef90_UPI00094EB956	460.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1393413_17	768726.HMPREF9178_1053	395.0	0	N/A	N/A
COG	UHGV-1393413_17	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1393413_17	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1393413_18	phrog_2270	678.9	0	N/A	unknown function
UniRef90	UHGV-1393413_18	UniRef90_UPI00094E93BE	1774.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-1393413_18	1035189.HMPREF9954_1922	1123.0	0	Chaperone of endosialidase	N/A
Pfam	UHGV-1393413_18	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-1393413_18	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
NCBIFam	UHGV-1393413_18	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1393413_18	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1393413_18	PF14594,PF00629,TIGR01665,TIGR04362,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1393413_19	phrog_12683	63.2	4.3e-18	N/A	unknown function
UniRef90	UHGV-1393413_19	UniRef90_A0A081R6K4	67.8	0.000000000000147	ATP synthase F0 sector subunit C	N/A
eggNOG-mapper	UHGV-1393413_19	1095737.HMPREF1110_1748	67.8	0.0000000000000247	N/A	N/A
PHROG	UHGV-1393413_20	phrog_1554	245.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1393413_20	1095737.HMPREF1110_1749	333.0	0	N/A	N/A
structural_annotation	UHGV-1393413_20	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1393413_21	phrog_4257	159.3	0	N/A	unknown function
UniRef90	UHGV-1393413_21	UniRef90_A0A139QI86	177.0	0	N/A	N/A
eggNOG-mapper	UHGV-1393413_21	1095737.HMPREF1110_1750	243.0	0	N/A	N/A
PHROG	UHGV-1393413_22	phrog_608	142.3	1.3004e-42	holin	lysis
UniRef90	UHGV-1393413_22	UniRef90_UPI00115BDBC0	192.0	0	phage holin	N/A
eggNOG-mapper	UHGV-1393413_22	936580.HMPREF1516_0703	183.0	0	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1393413_22	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
NCBIFam	UHGV-1393413_22	TIGR01673.1	N/A	N/A	phage holin	N/A
KOfam	UHGV-1393413_23	K01447	64.0	2.8e-18	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1393413_23	phrog_1110	349.7	0	endolysin	lysis
UniRef90	UHGV-1393413_23	UniRef90_A0A2H4J9X6	530.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-1393413_23	1054460.SPPN_05425	504.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1393413_23	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1393413_23	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-1393413_23	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
structural_annotation	UHGV-1393413_23	PF19127,PF01510,TIGR04035,COG5263	N/A	N/A	N/A	N/A