UHGV-1396363 (vOTU-024914)

Viral Genome: UHGV-1396363

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1396363
vOTU ID	vOTU-024914
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0247570
Associated BioSample	SAMEA2338757
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	85.83 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9817
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	40.89
Jumbo phage	No

Genome content
Genome length (bp)	36,339
GC content	52.76%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	64
CDS density	95%
Average CDS length (bps)	541.13
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 85.83)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1396363_1	phrog_2118	89.6	4.4e-26	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1396363_1	UniRef90_A0A417HX51	198.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1396363_1	1511.CLOST_1546	110.0	1.12e-29	HNH endonuclease	N/A
Pfam	UHGV-1396363_1	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1396363_1	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1396363_1	TIGR02646,COG1403	N/A	N/A	N/A	N/A
UniRef90	UHGV-1396363_4	UniRef90_A0A8D9PDK2	54.3	0.000000247	Zinc-ribbon containing domain	N/A
UniRef90	UHGV-1396363_6	UniRef90_UPI0019D1E2CF	259.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-1396363_6	1410632.JHWW01000006_gene695	205.0	0	N/A	N/A
Pfam	UHGV-1396363_6	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
structural_annotation	UHGV-1396363_6	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-1396363_7	phrog_1770	56.1	7.7e-16	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1396363_7	536233.CLO_1822	127.0	4.06e-35	N/A	N/A
structural_annotation	UHGV-1396363_7	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
PHROG	UHGV-1396363_10	phrog_801	63.7	3.9e-18	endolysin; inhibits RNA polymerase	lysis
UniRef90	UHGV-1396363_10	UniRef90_A0A316M891	101.0	5.5e-25	N/A	N/A
eggNOG-mapper	UHGV-1396363_10	1205681.CALW02000103_gene1536	57.4	0.0000000117	N/A	N/A
Pfam	UHGV-1396363_10	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-1396363_10	PF18909	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1396363_11	742738.HMPREF9460_02503	95.1	2.93e-24	N/A	N/A
structural_annotation	UHGV-1396363_11	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1396363_12	PF10922,MF_00839	N/A	N/A	N/A	N/A
KOfam	UHGV-1396363_13	K07474	109.8	4.7e-32	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1396363_13	phrog_51	116.4	1.9e-34	terminase small subunit	head and packaging
UniRef90	UHGV-1396363_13	UniRef90_A0A396NMY4	121.0	5.79e-33	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1396363_13	476272.RUMHYD_01754	108.0	9.52e-29	Terminase small subunit	N/A
Pfam	UHGV-1396363_13	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1396363_13	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1396363_13	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1396363_14	K06909	375.3	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1396363_14	phrog_5653	161.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-1396363_14	UniRef90_A0A2U1BEH4	708.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1396363_14	1123511.KB905868_gene187	469.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1396363_14	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1396363_14	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1396363_14	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1396363_14	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1396363_14	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1396363_15	phrog_533	360.2	0	portal protein	head and packaging
UniRef90	UHGV-1396363_15	UniRef90_UPI0006C81717	699.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1396363_15	1226322.HMPREF1545_00044	612.0	0	N/A	N/A
Pfam	UHGV-1396363_15	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1396363_15	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1396363_17	phrog_8680	225.9	0	N/A	unknown function
UniRef90	UHGV-1396363_17	UniRef90_A0A3R6D7I3	253.0	0	N/A	N/A
eggNOG-mapper	UHGV-1396363_17	411470.RUMGNA_02208	234.0	0	N/A	N/A
Pfam	UHGV-1396363_17	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-1396363_17	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-1396363_18	phrog_581	294.3	0	minor head protein	head and packaging
UniRef90	UHGV-1396363_18	UniRef90_A0A1C5N7V1	480.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-1396363_18	1226322.HMPREF1545_00046	366.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1396363_18	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1396363_18	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1396363_18	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1396363_19	phrog_2303	49.2	0.000000000000065	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1396363_19	1226322.HMPREF1545_00049	168.0	0	N/A	N/A
AcrCatalog	UHGV-1396363_19	cluster_74817	47.8	0.0000000043	NA	N/A
PHROG	UHGV-1396363_20	phrog_10	170.0	0	major head protein	head and packaging
UniRef90	UHGV-1396363_20	UniRef90_A0A2U1BEF2	508.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-1396363_20	1226322.HMPREF1545_00050	481.0	0	Phage capsid family	N/A
Pfam	UHGV-1396363_20	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1396363_20	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1396363_20	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1396363_20	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1396363_21	phrog_541	103.7	1.1e-30	head-tail adaptor	connector
eggNOG-mapper	UHGV-1396363_21	642492.Clole_0822	66.6	0.00000000000408	N/A	N/A
PHROG	UHGV-1396363_22	phrog_3366	105.9	3e-31	N/A	unknown function
eggNOG-mapper	UHGV-1396363_22	1226322.HMPREF1545_00053	176.0	0	N/A	N/A
Pfam	UHGV-1396363_22	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-1396363_22	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1396363_23	phrog_556	72.4	5.5e-21	minor head protein	head and packaging
UniRef90	UHGV-1396363_23	UniRef90_UPI00195E1497	218.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1396363_23	1226322.HMPREF1545_00054	165.0	0	Minor capsid protein	N/A
Pfam	UHGV-1396363_23	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1396363_23	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1396363_24	phrog_3266	48.2	0.00000000000015	tail completion	connector
eggNOG-mapper	UHGV-1396363_24	1232443.BAIA02000078_gene24	164.0	0	N/A	N/A
structural_annotation	UHGV-1396363_24	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1396363_25	phrog_3099	87.5	1.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-1396363_25	1235797.C816_04186	228.0	0	N/A	N/A
structural_annotation	UHGV-1396363_25	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-1396363_26	phrog_11299	67.4	2.5e-19	N/A	unknown function
eggNOG-mapper	UHGV-1396363_26	693746.OBV_18160	130.0	3.54e-37	N/A	N/A
structural_annotation	UHGV-1396363_26	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1396363_27	phrog_706	116.6	1.9e-34	N/A	unknown function
UniRef90	UHGV-1396363_27	UniRef90_UPI00164D7633	207.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1396363_27	693746.OBV_18170	197.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1396363_27	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1396363_27	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1396363_28	phrog_1535	114.3	0	tail length tape measure protein	tail
UniRef90	UHGV-1396363_28	UniRef90_A0A810PX76	225.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1396363_28	1235797.C816_04182	397.0	0	SLT domain	N/A
COG	UHGV-1396363_28	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-1396363_29	phrog_1194	70.0	3.1e-20	N/A	unknown function
eggNOG-mapper	UHGV-1396363_29	411902.CLOBOL_00125	109.0	4.18e-29	N/A	N/A
structural_annotation	UHGV-1396363_29	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1396363_30	phrog_13879	235.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1396363_30	1226322.HMPREF1545_00061	379.0	0	N/A	N/A
structural_annotation	UHGV-1396363_30	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1396363_31	PF10651,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-1396363_32	phrog_31538	45.8	0.0000000000012	N/A	unknown function
PHROG	UHGV-1396363_33	phrog_13589	161.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1396363_33	428125.CLOLEP_01434	217.0	0	N/A	N/A
PHROG	UHGV-1396363_34	phrog_37900	342.7	0	N/A	unknown function
UniRef90	UHGV-1396363_34	UniRef90_UPI001C3EA4DF	349.0	0	N/A	N/A
eggNOG-mapper	UHGV-1396363_34	552398.HMPREF0866_03098	250.0	0	N/A	N/A
Pfam	UHGV-1396363_34	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1396363_34	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1396363_34	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-1396363_35	phrog_29409	42.0	0.000000000014	N/A	unknown function
PHROG	UHGV-1396363_38	phrog_18725	88.1	8.1e-26	N/A	unknown function
eggNOG-mapper	UHGV-1396363_38	693746.OBV_18220	128.0	1.39e-35	N/A	N/A
Pfam	UHGV-1396363_39	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
structural_annotation	UHGV-1396363_39	PF20055,MF_03008,NF010730,COG3940	N/A	N/A	N/A	N/A
Pfam	UHGV-1396363_40	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
structural_annotation	UHGV-1396363_40	PF07484	N/A	N/A	N/A	N/A
PHROG	UHGV-1396363_43	phrog_6918	95.6	3.2e-28	holin	lysis
UniRef90	UHGV-1396363_43	UniRef90_A0A316QCY7	103.0	1.73e-26	Holin	N/A
eggNOG-mapper	UHGV-1396363_43	1297617.JPJD01000020_gene301	101.0	1.21e-26	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1396363_43	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-1396363_43	PF09682,TIGR01673	N/A	N/A	N/A	N/A
UniRef90	UHGV-1396363_44	UniRef90_UPI00164EA432	226.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1396363_44	525254.HMPREF0072_1273	219.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
COG	UHGV-1396363_44	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1396363_44	NF033743	N/A	N/A	N/A	N/A
UniRef90	UHGV-1396363_45	UniRef90_A0A1C6JAI6	62.4	0.0000000000475	RNA polymerase sigma factor, sigma-70 family	N/A
structural_annotation	UHGV-1396363_45	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1396363_46	phrog_3754	96.9	1.9e-28	N/A	unknown function
eggNOG-mapper	UHGV-1396363_46	476272.RUMHYD_01764	166.0	0	N/A	N/A
PHROG	UHGV-1396363_47	phrog_21718	101.4	7.6e-30	N/A	unknown function
eggNOG-mapper	UHGV-1396363_47	476272.RUMHYD_01768	62.0	0.000000000478	N/A	N/A
PHROG	UHGV-1396363_48	phrog_22984	76.0	1.7e-22	N/A	unknown function
PHROG	UHGV-1396363_49	phrog_16490	161.3	0	N/A	unknown function
eggNOG-mapper	UHGV-1396363_49	1408437.JNJN01000043_gene803	92.4	1.42e-19	N/A	N/A
PHROG	UHGV-1396363_50	phrog_20016	193.1	0	N/A	unknown function
UniRef90	UHGV-1396363_50	UniRef90_A0A285PT46	186.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1396363_50	1226322.HMPREF1545_00077	166.0	0	N/A	N/A
structural_annotation	UHGV-1396363_50	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1396363_51	PF12510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1396363_52	1226322.HMPREF1545_00079	95.1	1.08e-23	N/A	N/A
KOfam	UHGV-1396363_53	K14059	128.0	1.3e-37	int; integrase	N/A
PHROG	UHGV-1396363_53	phrog_1	151.5	7.00649e-45	integrase	integration and excision
UniRef90	UHGV-1396363_53	UniRef90_A0A810Q0Y2	413.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1396363_53	693746.OBV_43340	362.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1396363_53	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1396363_53	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1396363_53	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A
Pfam	UHGV-1396363_54	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1396363_54	PF12844	N/A	N/A	N/A	N/A
UniRef90	UHGV-1396363_59	UniRef90_A0A3D3Y0G5	86.7	7.15e-19	HTH cro/C1-type domain-containing protein	N/A
structural_annotation	UHGV-1396363_59	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1396363_60	K07448	119.6	2.8e-35	mrr; restriction system protein	N/A
PHROG	UHGV-1396363_60	phrog_19856	49.9	0.000000000000035	N/A	unknown function
UniRef90	UHGV-1396363_60	UniRef90_A0A3Q9QRS1	104.0	5.54e-22	Mrr_cat domain-containing protein	N/A
eggNOG-mapper	UHGV-1396363_60	689781.AUJX01000015_gene1540	148.0	2.39005e-41	restriction endonuclease	N/A
PADLOC	UHGV-1396363_60	ZorD1_00005	63.3	2.8e-18	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-1396363_60	PF04471	N/A	N/A	Restriction endonuclease	Mrr_cat
COG	UHGV-1396363_60	COG1787	N/A	N/A	Endonuclease, HJR/Mrr/RecB family	N/A
structural_annotation	UHGV-1396363_60	PF04471,MF_00722,NF040854,COG1787	N/A	N/A	N/A	N/A
UniRef90	UHGV-1396363_61	UniRef90_UPI000689C87F	50.1	0.00000273	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1396363_61	1392487.JIAD01000001_gene1287	50.1	0.000000458	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1396363_61	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-1396363_61	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1396363_61	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1396363_62	UniRef90_A0A1C7FQD9	83.2	1.15e-18	Transcriptional regulator	N/A