UHGV-1397410 (vOTU-023529)

Viral Genome: UHGV-1397410

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1397410
vOTU ID	vOTU-023529
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0226984
Associated BioSample	SAMN00068173
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	77.47 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9823
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	41.96
Jumbo phage	No

Genome content
Genome length (bp)	32,744
GC content	54.54%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	58
CDS density	98%
Average CDS length (bps)	552.21
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 77.47)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1397410_1	phrog_27197	99.5	1.1e-30	N/A	unknown function
eggNOG-mapper	UHGV-1397410_1	573061.Clocel_3578	55.1	0.000000421	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1397410_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-1397410_1	NF007410	N/A	N/A	N/A	N/A
PHROG	UHGV-1397410_2	phrog_155	154.8	0	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1397410_2	UniRef90_UPI00130EB09C	202.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-1397410_2	748224.HMPREF9436_03360	179.0	0	ERF superfamily	N/A
Pfam	UHGV-1397410_2	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1397410_2	PF04404,COG4712	N/A	N/A	N/A	N/A
KOfam	UHGV-1397410_3	K03111	136.8	2.29999e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1397410_3	phrog_44	132.8	2.3e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1397410_3	UniRef90_G4L1H2	145.0	5.13996e-42	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1397410_3	693746.OBV_19910	145.0	8.61799e-43	Single-strand binding protein family	N/A
Pfam	UHGV-1397410_3	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1397410_3	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1397410_3	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1397410_3	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1397410_3	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1397410_4	phrog_5810	70.9	1.6e-20	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1397410_4	UniRef90_UPI00164D8A5B	90.5	1.65e-17	replisome organizer	N/A
eggNOG-mapper	UHGV-1397410_4	742740.HMPREF9474_03117	189.0	0	N/A	N/A
structural_annotation	UHGV-1397410_4	PF01475,NF006999,COG0735	N/A	N/A	N/A	N/A
UniRef90	UHGV-1397410_6	UniRef90_UPI001C10265C	98.2	3.59e-24	N/A	N/A
Pfam	UHGV-1397410_6	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1397410_6	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-1397410_7	phrog_3136	134.5	2.5e-40	N/A	unknown function
UniRef90	UHGV-1397410_7	UniRef90_UPI001C00EDA4	129.0	9.65e-35	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1397410_7	1007096.BAGW01000031_gene120	53.9	0.00000448	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-1397410_7	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1397410_7	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1397410_8	phrog_38832	89.2	1.8e-26	N/A	unknown function
eggNOG-mapper	UHGV-1397410_8	445972.ANACOL_00165	79.3	0.00000000000000176	N/A	N/A
PHROG	UHGV-1397410_13	phrog_59	133.3	9.3e-40	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1397410_13	UniRef90_UPI000A715418	146.0	1.63994e-41	NUMOD4 motif-containing HNH endonuclease	N/A
eggNOG-mapper	UHGV-1397410_13	212035.YL247_MIMIV	103.0	1.04e-23	HNH endonuclease	N/A
PADLOC	UHGV-1397410_13	HEase_00016	76.8	5.6e-22	homing endonuclease	RM
Pfam	UHGV-1397410_13	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-1397410_13	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
UniRef90	UHGV-1397410_14	UniRef90_UPI0019D1E2CF	231.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-1397410_14	742735.HMPREF9467_00909	174.0	0	N/A	N/A
structural_annotation	UHGV-1397410_14	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-1397410_15	phrog_1770	62.9	5.9e-18	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1397410_15	536233.CLO_1822	153.0	4.2039e-45	N/A	N/A
structural_annotation	UHGV-1397410_15	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
PHROG	UHGV-1397410_18	phrog_801	63.9	3.2e-18	endolysin; inhibits RNA polymerase	lysis
UniRef90	UHGV-1397410_18	UniRef90_A0A316M891	100.0	1.1e-24	N/A	N/A
eggNOG-mapper	UHGV-1397410_18	1366055.S5MLS6_9CAUD	68.9	0.00000000000297	Cytidine and deoxycytidylate deaminase zinc-binding region	N/A
Pfam	UHGV-1397410_18	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-1397410_18	PF18909	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1397410_19	742738.HMPREF9460_02503	97.4	3.59e-25	N/A	N/A
structural_annotation	UHGV-1397410_19	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-1397410_20	K07319	122.1	5.1e-36	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-1397410_20	phrog_498	445.3	0	DNA methyltransferase	other
UniRef90	UHGV-1397410_20	UniRef90_A0A810Q3Z7	441.0	0	N6_N4_Mtase domain-containing protein	N/A
eggNOG-mapper	UHGV-1397410_20	1423758.BN55_01455	426.0	0	DNA methylase	N/A
PADLOC	UHGV-1397410_20	MTase_II_00015	231.9	0	Type II methyltransferase	RM
Pfam	UHGV-1397410_20	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-1397410_20	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1397410_20	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1397410_20	PF01555,PF02195,MF_02015,MF_01872,NF010253,TIGR04285,COG0863,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-1397410_22	K06909	379.3	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1397410_22	phrog_3717	162.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-1397410_22	UniRef90_A0A2U1BEH4	716.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1397410_22	1123511.KB905868_gene187	458.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1397410_22	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1397410_22	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1397410_22	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1397410_22	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1397410_22	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1397410_23	phrog_533	351.2	0	portal protein	head and packaging
UniRef90	UHGV-1397410_23	UniRef90_UPI0006C81717	657.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1397410_23	1226322.HMPREF1545_00044	571.0	0	N/A	N/A
Pfam	UHGV-1397410_23	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1397410_23	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1397410_25	phrog_581	291.6	0	minor head protein	head and packaging
UniRef90	UHGV-1397410_25	UniRef90_UPI001D080D49	473.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1397410_25	1226322.HMPREF1545_00046	370.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1397410_25	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1397410_25	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1397410_25	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1397410_27	phrog_2303	48.9	0.000000000000067	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1397410_27	1226322.HMPREF1545_00049	162.0	0	N/A	N/A
PHROG	UHGV-1397410_28	phrog_10	169.7	0	major head protein	head and packaging
UniRef90	UHGV-1397410_28	UniRef90_A0A2U1BEF2	506.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-1397410_28	1226322.HMPREF1545_00050	483.0	0	Phage capsid family	N/A
Pfam	UHGV-1397410_28	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1397410_28	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1397410_28	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1397410_28	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1397410_29	phrog_541	103.9	8.7e-31	head-tail adaptor	connector
eggNOG-mapper	UHGV-1397410_29	642492.Clole_0822	67.8	0.00000000000146	N/A	N/A
PHROG	UHGV-1397410_30	phrog_3366	105.3	4.6e-31	N/A	unknown function
eggNOG-mapper	UHGV-1397410_30	1226322.HMPREF1545_00053	166.0	0	N/A	N/A
Pfam	UHGV-1397410_30	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-1397410_30	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1397410_31	phrog_556	71.7	8.8e-21	minor head protein	head and packaging
UniRef90	UHGV-1397410_31	UniRef90_UPI00195E1497	216.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1397410_31	1226322.HMPREF1545_00054	166.0	0	Minor capsid protein	N/A
Pfam	UHGV-1397410_31	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1397410_31	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1397410_32	phrog_3266	47.4	0.00000000000023	tail completion	connector
eggNOG-mapper	UHGV-1397410_32	1232443.BAIA02000078_gene24	163.0	0	N/A	N/A
structural_annotation	UHGV-1397410_32	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1397410_33	phrog_3099	88.1	1.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-1397410_33	1235797.C816_04186	228.0	0	N/A	N/A
structural_annotation	UHGV-1397410_33	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-1397410_34	phrog_11299	66.1	6e-19	N/A	unknown function
eggNOG-mapper	UHGV-1397410_34	693746.OBV_18160	132.0	1.24e-37	N/A	N/A
structural_annotation	UHGV-1397410_34	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1397410_35	phrog_706	120.9	8.4e-36	N/A	unknown function
UniRef90	UHGV-1397410_35	UniRef90_A0A2U1BEN4	209.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1397410_35	693746.OBV_18170	197.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1397410_35	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1397410_35	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1397410_36	phrog_1535	116.7	0	tail length tape measure protein	tail
UniRef90	UHGV-1397410_36	UniRef90_A0A810PX76	236.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1397410_36	1235797.C816_04182	376.0	0	SLT domain	N/A
COG	UHGV-1397410_36	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-1397410_37	phrog_1194	70.0	3e-20	N/A	unknown function
eggNOG-mapper	UHGV-1397410_37	411902.CLOBOL_00125	109.0	4.18e-29	N/A	N/A
structural_annotation	UHGV-1397410_37	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1397410_38	phrog_13879	234.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1397410_38	1226322.HMPREF1545_00061	380.0	0	N/A	N/A
structural_annotation	UHGV-1397410_38	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1397410_39	PF10651,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-1397410_42	phrog_10898	282.9	0	N/A	unknown function
UniRef90	UHGV-1397410_42	UniRef90_A0A7U3NJT3	190.0	0	Putative Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1397410_42	717606.PaecuDRAFT_2136	67.8	0.00000000028	S-layer homology domain	N/A
COG	UHGV-1397410_42	COG1520	N/A	N/A	Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat	N/A
structural_annotation	UHGV-1397410_42	PF19081,PF15418,MF_01905,NF032891,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-1397410_43	phrog_10898	41.4	0.000000000021	N/A	unknown function
structural_annotation	UHGV-1397410_43	PF16408,NF033510	N/A	N/A	N/A	N/A
UniRef90	UHGV-1397410_45	UniRef90_R5IRZ6	291.0	0	N/A	N/A
eggNOG-mapper	UHGV-1397410_45	1519439.JPJG01000060_gene1894	209.0	0	N/A	N/A
Pfam	UHGV-1397410_45	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1397410_45	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1397410_45	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-1397410_46	phrog_18725	86.3	2e-25	N/A	unknown function
eggNOG-mapper	UHGV-1397410_46	693746.OBV_18220	129.0	4.89e-36	N/A	N/A
structural_annotation	UHGV-1397410_47	PF20055,MF_03008,NF010730,COG3940	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1397410_48	PF07484	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1397410_49	1232443.BAIA02000106_gene3111	50.4	0.00000226	N/A	N/A
PHROG	UHGV-1397410_51	phrog_13256	62.8	2.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-1397410_51	1226322.HMPREF1545_00166	70.9	0.00000000000000329	N/A	N/A
UniRef90	UHGV-1397410_52	UniRef90_A0A358M2Y7	227.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1397410_52	525254.HMPREF0072_1273	219.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
COG	UHGV-1397410_52	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1397410_52	NF033743	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1397410_53	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1397410_54	phrog_3754	96.4	2.6e-28	N/A	unknown function
eggNOG-mapper	UHGV-1397410_54	1226322.HMPREF1545_00073	164.0	0	N/A	N/A
PHROG	UHGV-1397410_55	phrog_21718	107.6	9.4e-32	N/A	unknown function
eggNOG-mapper	UHGV-1397410_55	397290.C810_05210	66.2	0.000000000021	N/A	N/A
PHROG	UHGV-1397410_56	phrog_22984	79.2	2.9e-23	N/A	unknown function
PHROG	UHGV-1397410_57	phrog_16490	159.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1397410_57	397290.C810_01328	96.7	1.13e-20	N/A	N/A
PHROG	UHGV-1397410_58	phrog_20016	87.8	8.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-1397410_58	1226322.HMPREF1545_00077	87.4	2.92e-21	N/A	N/A