UHGV-1397414 (vOTU-024921)

Viral Genome: UHGV-1397414

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1397414
vOTU ID	vOTU-024921
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0225282
Associated BioSample	SAMEA3449231
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	54.99 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	11
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9804
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	29.66
Jumbo phage	No

Genome content
Genome length (bp)	32,443
GC content	39.24%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	52
CDS density	85%
Average CDS length (bps)	528.12
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 54.99)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1397414_1	phrog_18190	395.4	0	N/A	unknown function
UniRef90	UHGV-1397414_1	UniRef90_A0A3A8WLR6	337.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1397414_1	1235790.C805_00089	181.0	0	N/A	N/A
structural_annotation	UHGV-1397414_1	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1397414_2	phrog_1194	50.3	0.000000000000032	N/A	unknown function
eggNOG-mapper	UHGV-1397414_2	742733.HMPREF9469_01808	62.4	0.000000000212	N/A	N/A
Pfam	UHGV-1397414_2	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1397414_2	PF20458,TIGR02126,COG4718	N/A	N/A	N/A	N/A
PHROG	UHGV-1397414_3	phrog_9700	110.0	2.3e-32	N/A	unknown function
eggNOG-mapper	UHGV-1397414_3	476272.RUMHYD_01979	106.0	8.17e-24	N/A	N/A
PHROG	UHGV-1397414_4	phrog_28918	153.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1397414_4	397288.C806_03052	200.0	0	domain protein	N/A
COG	UHGV-1397414_4	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
KOfam	UHGV-1397414_5	K01448	121.4	8.1e-36	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1397414_5	phrog_435	176.8	0	endolysin	lysis
UniRef90	UHGV-1397414_5	UniRef90_A0A1Q6LL73	308.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1397414_5	1232447.BAHW02000005_gene156	180.0	0	Cell wall hydrolase autolysin	N/A
Pfam	UHGV-1397414_5	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-1397414_5	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1397414_5	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-1397414_7	phrog_36112	131.0	4.2e-39	N/A	unknown function
eggNOG-mapper	UHGV-1397414_7	476272.RUMHYD_01969	139.0	3.3e-40	N/A	N/A
structural_annotation	UHGV-1397414_7	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1397414_8	476272.RUMHYD_01968	137.0	3.07e-39	N/A	N/A
structural_annotation	UHGV-1397414_8	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1397414_9	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1397414_10	1298920.KI911353_gene2654	177.0	0	N/A	N/A
AcrCatalog	UHGV-1397414_10	cluster_24841	102.0	1.09e-29	NA	N/A
structural_annotation	UHGV-1397414_11	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1397414_12	phrog_443	59.5	9e-17	holin	lysis
UniRef90	UHGV-1397414_12	UniRef90_UPI000E3FE0A2	90.1	2.41e-22	holin	N/A
eggNOG-mapper	UHGV-1397414_12	411490.ANACAC_00704	92.4	4.65e-24	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-1397414_12	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-1397414_12	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-1397414_13	phrog_1863	52.3	0.0000000000000048	N/A	unknown function
eggNOG-mapper	UHGV-1397414_14	397290.C810_01402	75.9	4.03e-16	N/A	N/A
Pfam	UHGV-1397414_14	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1397414_15	PF21169	N/A	N/A	N/A	N/A
PHROG	UHGV-1397414_16	phrog_29	163.6	0	major head protein	head and packaging
UniRef90	UHGV-1397414_16	UniRef90_A0A173UF26	616.0	0	Phage major capsid protein E	N/A
eggNOG-mapper	UHGV-1397414_16	1347368.HG964404_gene4993	168.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1397414_16	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1397414_16	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1397414_17	phrog_909	85.1	5.9e-25	major head protein	head and packaging
UniRef90	UHGV-1397414_17	UniRef90_R7BGI8	194.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1397414_17	1296662.S5MCF0_9CAUD	59.7	0.000000000625	N/A	N/A
UniRef90	UHGV-1397414_18	UniRef90_R6C0B6	139.0	2.51e-38	Phage capsid scaffolding protein	N/A
PHROG	UHGV-1397414_19	phrog_64	175.9	0	portal protein	head and packaging
UniRef90	UHGV-1397414_19	UniRef90_A0A173UGW9	752.0	0	Phage portal protein, SPP1 family	N/A
eggNOG-mapper	UHGV-1397414_19	1298920.KI911353_gene2663	456.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1397414_19	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1397414_19	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1397414_20	PF10122,NF041070,COG4416	N/A	N/A	N/A	N/A
PHROG	UHGV-1397414_21	phrog_36	72.7	5.3e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-1397414_21	UniRef90_A0A352SH29	115.0	8.67e-31	RNA polymerase subunit sigma-70 (Fragment)	N/A
eggNOG-mapper	UHGV-1397414_21	97138.C820_00221	78.2	1.73e-16	sigma factor activity	N/A
COG	UHGV-1397414_21	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1397414_21	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-1397414_22	phrog_38	146.3	1.90577e-43	terminase large subunit	head and packaging
UniRef90	UHGV-1397414_22	UniRef90_A0A4Q5C857	974.0	0	Terminase_6C domain-containing protein	N/A
eggNOG-mapper	UHGV-1397414_22	397290.C810_01390	664.0	0	chromosome segregation	N/A
Pfam	UHGV-1397414_22	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
COG	UHGV-1397414_22	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1397414_22	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
UniRef90	UHGV-1397414_23	UniRef90_UPI0011072322	75.9	0.00000000000000197	N/A	N/A
eggNOG-mapper	UHGV-1397414_23	1256908.HMPREF0373_00479	70.9	0.0000000000000277	N/A	N/A
structural_annotation	UHGV-1397414_23	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-1397414_27	phrog_25639	47.3	0.00000000000028	N/A	unknown function
eggNOG-mapper	UHGV-1397414_27	585501.HMPREF6123_0841	52.8	0.0000000195	N/A	N/A
PHROG	UHGV-1397414_31	phrog_6493	129.0	2.8e-38	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1397414_31	UniRef90_UPI001AE08681	117.0	6.22e-27	replication protein	N/A
eggNOG-mapper	UHGV-1397414_31	697303.Thewi_2436	136.0	6.18e-35	Transcriptional regulator	N/A
COG	UHGV-1397414_31	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1397414_31	PF07106,NF040642,COG3355	N/A	N/A	N/A	N/A
KOfam	UHGV-1397414_34	K07741	87.9	2.7e-25	antB; anti-repressor protein	N/A
PHROG	UHGV-1397414_34	phrog_130	223.6	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1397414_34	UniRef90_A0A373NQ65	311.0	0	Phage antirepressor Ant	N/A
eggNOG-mapper	UHGV-1397414_34	632518.Calow_0811	197.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1397414_34	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1397414_34	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1397414_34	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1397414_34	PF02498,PF03374,TIGR02681,COG3617	N/A	N/A	N/A	N/A
UniRef90	UHGV-1397414_35	UniRef90_A0A8D9UIS5	151.0	4.25014e-42	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1397414_35	658655.HMPREF0988_00895	132.0	1.23e-36	N/A	N/A
structural_annotation	UHGV-1397414_37	PF20795	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1397414_41	1235800.C819_00521	54.3	0.000000115	N/A	N/A
structural_annotation	UHGV-1397414_41	PF09392,NF011854	N/A	N/A	N/A	N/A
PHROG	UHGV-1397414_44	phrog_8680	182.7	0	N/A	unknown function
UniRef90	UHGV-1397414_44	UniRef90_A0A3R6Q1T2	236.0	0	N/A	N/A
eggNOG-mapper	UHGV-1397414_44	476272.RUMHYD_01896	133.0	1.82e-35	N/A	N/A
Pfam	UHGV-1397414_44	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-1397414_44	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-1397414_46	phrog_1233	49.6	0.000000000000062	N/A	unknown function
UniRef90	UHGV-1397414_46	UniRef90_A0A345BPX6	91.7	6.2e-22	Metal-dependent hydrolase	N/A
eggNOG-mapper	UHGV-1397414_46	397290.C810_01336	104.0	7.35e-28	N/A	N/A
eggNOG-mapper	UHGV-1397414_47	658655.HMPREF0988_00915	129.0	1.71e-34	N/A	N/A
PHROG	UHGV-1397414_48	phrog_20016	225.4	0	N/A	unknown function
UniRef90	UHGV-1397414_48	UniRef90_A0A285PT46	161.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1397414_48	397290.C810_05214	230.0	0	N/A	N/A
structural_annotation	UHGV-1397414_48	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1397414_49	phrog_16490	182.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1397414_49	397290.C810_01328	191.0	0	N/A	N/A
eggNOG-mapper	UHGV-1397414_50	658655.HMPREF0988_00918	65.1	0.000000000000633	N/A	N/A
PHROG	UHGV-1397414_51	phrog_21718	42.3	0.000000000013	N/A	unknown function
eggNOG-mapper	UHGV-1397414_51	397290.C810_01326	77.4	0.00000000000000166	N/A	N/A
structural_annotation	UHGV-1397414_51	NF033819	N/A	N/A	N/A	N/A