UHGV-1398139 (vOTU-034305)

Viral Genome: UHGV-1398139

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1398139
vOTU ID	vOTU-034305
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0129536
Associated BioSample	SAMEA2738137
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	54.62 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	19
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9831
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	36.26
Jumbo phage	No

Genome content
Genome length (bp)	18,148
GC content	40.90%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	21
CDS density	98%
Average CDS length (bps)	848.14
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 54.62)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1398139_1	phrog_361	146.8	6.5861e-44	terminase small subunit	head and packaging
UniRef90	UHGV-1398139_1	UniRef90_A0A414CIM9	207.0	0	POU-specific domain-containing protein	N/A
eggNOG-mapper	UHGV-1398139_1	1005705.HMPREF9967_1038	231.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-1398139_1	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-1398139_1	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1398139_1	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1398139_2	phrog_9	346.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-1398139_2	UniRef90_A0A7G1IQ86	1089.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1398139_2	888049.HMPREF8578_0694	1146.0	0	Terminase	N/A
Pfam	UHGV-1398139_2	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1398139_2	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1398139_2	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1398139_2	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1398139_3	phrog_2955	125.5	1e-37	N/A	unknown function
UniRef90	UHGV-1398139_3	UniRef90_A0A062WVS8	122.0	3.06e-35	N/A	N/A
PHROG	UHGV-1398139_4	phrog_12	190.3	0	portal protein	head and packaging
UniRef90	UHGV-1398139_4	UniRef90_UPI001CBC02E6	728.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1398139_4	888049.HMPREF8578_0696	781.0	0	Phage portal protein	N/A
Pfam	UHGV-1398139_4	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1398139_4	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1398139_4	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1398139_4	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1398139_5	K06904	129.2	4.2e-38	N/A	N/A
PHROG	UHGV-1398139_5	phrog_80	164.8	0	head maturation protease	head and packaging
UniRef90	UHGV-1398139_5	UniRef90_E6KKD2	378.0	0	Phage prohead protease, HK97 family	N/A
eggNOG-mapper	UHGV-1398139_5	644007.C5J962_9CAUD	381.0	0	peptidase activity	N/A
Pfam	UHGV-1398139_5	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1398139_5	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
structural_annotation	UHGV-1398139_5	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1398139_6	phrog_10	162.9	0	major head protein	head and packaging
UniRef90	UHGV-1398139_6	UniRef90_E6KKD3	619.0	0	Phage major capsid protein, HK97 family	N/A
eggNOG-mapper	UHGV-1398139_6	888049.HMPREF8578_0698	619.0	0	capsid protein	N/A
Pfam	UHGV-1398139_6	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1398139_6	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1398139_6	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1398139_6	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1398139_7	phrog_390	90.5	1.3e-26	Arc-like repressor	transcription regulation
UniRef90	UHGV-1398139_7	UniRef90_A0A0P0N6K2	86.3	5.01e-20	Phage transcriptional terminator	N/A
eggNOG-mapper	UHGV-1398139_7	1405498.SSIM_04855	50.4	0.00000082	Rho termination factor, N-terminal domain	N/A
PHROG	UHGV-1398139_8	phrog_2550	142.8	3.79752e-43	N/A	unknown function
UniRef90	UHGV-1398139_8	UniRef90_A0A081R3E6	186.0	0	Prophage pi2 protein 35	N/A
eggNOG-mapper	UHGV-1398139_8	888049.HMPREF8578_0700	185.0	0	N/A	N/A
structural_annotation	UHGV-1398139_8	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1398139_9	phrog_1951	134.3	2.69999e-40	head-tail adaptor	connector
UniRef90	UHGV-1398139_9	UniRef90_UPI000B58A5F0	176.0	0	phage head closure protein	N/A
eggNOG-mapper	UHGV-1398139_9	888049.HMPREF8578_0701	191.0	0	head-tail adaptor	N/A
NCBIFam	UHGV-1398139_9	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1398139_9	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1398139_9	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1398139_10	phrog_5	43.3	0.0000000000093	tail completion or Neck1 protein	connector
UniRef90	UHGV-1398139_10	UniRef90_A0A098ANM6	201.0	0	Bacteriophage pi2 protein 37	N/A
eggNOG-mapper	UHGV-1398139_10	644007.C5J967_9CAUD	201.0	0	exonuclease activity	N/A
Pfam	UHGV-1398139_10	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1398139_10	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1398139_11	phrog_78	47.9	0.00000000000028	tail terminator	connector
UniRef90	UHGV-1398139_11	UniRef90_T0U477	155.0	0	Prophage pi2 protein 38	N/A
eggNOG-mapper	UHGV-1398139_11	644007.C5J968_9CAUD	201.0	0	aminopeptidase activity	N/A
structural_annotation	UHGV-1398139_11	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1398139_12	phrog_88	161.1	0	major tail protein	tail
UniRef90	UHGV-1398139_12	UniRef90_E6KKD9	393.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1398139_12	888049.HMPREF8578_0704	393.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1398139_12	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1398139_12	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1398139_13	phrog_709	147.3	4.34403e-44	N/A	unknown function
UniRef90	UHGV-1398139_13	UniRef90_A0A0E4CSV4	183.0	0	Prophage pi2 protein 40	N/A
eggNOG-mapper	UHGV-1398139_13	888049.HMPREF8578_0705	271.0	0	N/A	N/A
structural_annotation	UHGV-1398139_13	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1398139_14	phrog_5755	406.3	0	tail length tape measure protein	tail
UniRef90	UHGV-1398139_14	UniRef90_C5J971	1327.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1398139_14	644007.C5J971_9CAUD	1327.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-1398139_14	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1398139_14	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
structural_annotation	UHGV-1398139_14	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1398139_15	phrog_33	48.7	0.00000000000002	distal tail protein Dit	tail
UniRef90	UHGV-1398139_15	UniRef90_A0A1F0TGE5	439.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1398139_15	888049.HMPREF8578_0707	440.0	0	N/A	N/A
structural_annotation	UHGV-1398139_15	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1398139_16	phrog_1330	616.6	0	tail protein	tail
UniRef90	UHGV-1398139_16	UniRef90_F9PY45	1717.0	0	Phage minor structural protein, N-terminal domain protein	N/A
eggNOG-mapper	UHGV-1398139_16	1035189.HMPREF9954_1922	1717.0	0	Chaperone of endosialidase	N/A
Pfam	UHGV-1398139_16	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
NCBIFam	UHGV-1398139_16	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1398139_16	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1398139_16	PF14594,PF00629,TIGR01665,TIGR04362,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1398139_17	phrog_12683	58.0	1.8e-16	N/A	unknown function
UniRef90	UHGV-1398139_17	UniRef90_A0A081R6K4	63.5	0.00000000000697	ATP synthase F0 sector subunit C	N/A
eggNOG-mapper	UHGV-1398139_17	1095737.HMPREF1110_1748	63.5	0.00000000000117	N/A	N/A
PHROG	UHGV-1398139_18	phrog_1554	258.7	0	N/A	unknown function
UniRef90	UHGV-1398139_18	UniRef90_A0A139Q9H9	206.0	0	N/A	N/A
eggNOG-mapper	UHGV-1398139_18	1035189.HMPREF9954_1920	403.0	0	N/A	N/A
structural_annotation	UHGV-1398139_18	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1398139_19	phrog_199	56.3	4.1e-16	holin	lysis
UniRef90	UHGV-1398139_19	UniRef90_A0A1S5SD95	241.0	0	Holin 1	N/A
eggNOG-mapper	UHGV-1398139_19	413066.A1EAB5_9CAUD	167.0	0	Pfam:Phage_holin_4_1	N/A
Pfam	UHGV-1398139_19	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1398139_19	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-1398139_19	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-1398139_20	K00689	66.3	1.2e-19	E2.4.1.5; dextransucrase [EC:2.4.1.5]	N/A
PHROG	UHGV-1398139_20	phrog_1110	351.4	0	endolysin	lysis
UniRef90	UHGV-1398139_20	UniRef90_UPI00066DC627	549.0	0	N-acetylmuramoyl-L-alanine amidase family protein	N/A
eggNOG-mapper	UHGV-1398139_20	1054460.SPPN_05425	494.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1398139_20	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1398139_20	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-1398139_20	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
structural_annotation	UHGV-1398139_20	PF19127,PF01510,TIGR04035,COG5263	N/A	N/A	N/A	N/A
PHROG	UHGV-1398139_21	phrog_1529	72.8	6.9e-21	N/A	unknown function
UniRef90	UHGV-1398139_21	UniRef90_A0A062WUP7	89.4	1.37e-22	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1398139_21	1035189.HMPREF9954_1916	90.9	1.09e-23	N/A	N/A