UHGV-1398431 (vOTU-095001)

Viral Genome: UHGV-1398431

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1398431
vOTU ID	vOTU-095001
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0129951
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	51.74 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	11
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9819
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	23.69
Jumbo phage	No

Genome content
Genome length (bp)	18,191
GC content	42.02%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	28
CDS density	94%
Average CDS length (bps)	610.18
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 51.74)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1398431_3	phrog_7566	102.5	1.8e-30	N/A	unknown function
eggNOG-mapper	UHGV-1398431_3	97139.C824_05985	112.0	2.24e-30	N/A	N/A
UniRef90	UHGV-1398431_4	UniRef90_UPI001BC85D37	229.0	0	N/A	N/A
eggNOG-mapper	UHGV-1398431_4	476272.RUMHYD_03857	224.0	0	N/A	N/A
Pfam	UHGV-1398431_4	PF14199	N/A	N/A	N/A	DUF4317
structural_annotation	UHGV-1398431_4	PF14199,MF_00730,NF001557,COG3081	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1398431_5	PF17516,NF037951	N/A	N/A	N/A	N/A
PHROG	UHGV-1398431_6	phrog_25456	76.1	3.8e-22	N/A	unknown function
PHROG	UHGV-1398431_7	phrog_924	46.4	0.00000000000079	N/A	unknown function
UniRef90	UHGV-1398431_7	UniRef90_A0A893WE10	188.0	0	N/A	N/A
eggNOG-mapper	UHGV-1398431_7	411461.DORFOR_01155	105.0	1.67e-28	N/A	N/A
Pfam	UHGV-1398431_7	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1398431_7	PF04448,NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-1398431_8	phrog_599	40.3	0.000000000055	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1398431_8	UniRef90_UPI00189A61B2	211.0	0	Lar family restriction alleviation protein	N/A
Pfam	UHGV-1398431_8	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
PHROG	UHGV-1398431_9	phrog_10714	43.1	0.0000000000056	N/A	unknown function
PHROG	UHGV-1398431_11	phrog_15198	60.0	4.4e-17	N/A	unknown function
UniRef90	UHGV-1398431_11	UniRef90_A0A174HIL1	147.0	4.2039e-45	N/A	N/A
Pfam	UHGV-1398431_11	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-1398431_12	phrog_6568	63.3	2.5e-18	N/A	unknown function
eggNOG-mapper	UHGV-1398431_12	1203606.HMPREF1526_00241	50.8	0.000000392	N/A	N/A
PHROG	UHGV-1398431_13	phrog_36	75.0	1.1e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-1398431_13	UniRef90_UPI001F14539B	118.0	2.67e-31	N/A	N/A
eggNOG-mapper	UHGV-1398431_13	1235800.C819_02243	107.0	1.28e-27	N/A	N/A
structural_annotation	UHGV-1398431_13	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-1398431_14	phrog_5110	100.9	7.1e-30	terminase small subunit	head and packaging
UniRef90	UHGV-1398431_14	UniRef90_A0A1C5LZF0	78.2	2.83e-16	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-1398431_14	936140.AEOT01000014_gene1353	68.2	0.00000000000022	N/A	N/A
Pfam	UHGV-1398431_14	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-1398431_14	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1398431_15	phrog_9	261.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-1398431_15	UniRef90_D4M588	1078.0	0	Phage terminase-like protein, large subunit	N/A
eggNOG-mapper	UHGV-1398431_15	1232452.BAIB02000007_gene1629	545.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-1398431_15	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1398431_15	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1398431_15	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1398431_15	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1398431_16	phrog_12	79.7	2.6e-23	portal protein	head and packaging
UniRef90	UHGV-1398431_16	UniRef90_UPI00156D5DC9	689.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1398431_16	1232452.BAIB02000007_gene1627	298.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-1398431_16	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1398431_16	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1398431_16	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1398431_17	K01358	160.3	0	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1398431_17	phrog_94	238.3	0	head maturation protease	head and packaging
UniRef90	UHGV-1398431_17	UniRef90_UPI00156EEE56	495.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-1398431_17	1232452.BAIB02000007_gene1626	270.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1398431_17	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1398431_17	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1398431_17	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1398431_18	phrog_10	78.7	3.4e-23	major head protein	head and packaging
UniRef90	UHGV-1398431_18	UniRef90_UPI00156F222D	724.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1398431_18	1232452.BAIB02000007_gene1625	466.0	0	Phage capsid family	N/A
Pfam	UHGV-1398431_18	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1398431_18	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1398431_18	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1398431_18	PF05065,TIGR01554,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1398431_20	UniRef90_UPI00189B1559	237.0	0	phage head closure protein	N/A
NCBIFam	UHGV-1398431_20	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-1398431_20	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1398431_21	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1398431_22	phrog_5	48.3	0.00000000000025	tail completion or Neck1 protein	connector
UniRef90	UHGV-1398431_22	UniRef90_D4M595	235.0	0	Phage protein, HK97 gp10 family	N/A
NCBIFam	UHGV-1398431_22	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1398431_22	TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1398431_23	phrog_88	95.1	7.6e-28	major tail protein	tail
UniRef90	UHGV-1398431_23	UniRef90_D4M596	387.0	0	Phage major tail protein, phi13 family	N/A
Pfam	UHGV-1398431_23	PF04630	N/A	N/A	Phage tail tube protein	Phage_TTP_1
NCBIFam	UHGV-1398431_23	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1398431_23	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
KOfam	UHGV-1398431_25	K10421	49.9	0.000000000000022	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-1398431_25	phrog_23464	189.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1398431_25	1232452.BAIB02000007_gene1616	404.0	0	phage tail tape measure protein	N/A
COG	UHGV-1398431_25	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
PHROG	UHGV-1398431_26	phrog_33	65.1	1.7e-18	distal tail protein Dit	tail
UniRef90	UHGV-1398431_26	UniRef90_UPI001570C170	477.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1398431_26	1235798.C817_02569	211.0	0	tail component	N/A
NCBIFam	UHGV-1398431_26	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-1398431_26	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1398431_26	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1398431_27	phrog_13289	427.7	0	tail protein	tail
UniRef90	UHGV-1398431_27	UniRef90_UPI001570BE36	1251.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1398431_27	1235798.C817_02568	476.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-1398431_27	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1398431_27	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1398431_27	COG2885	N/A	N/A	Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins	N/A
structural_annotation	UHGV-1398431_27	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1398431_28	phrog_11037	51.0	0.000000000000023	N/A	unknown function
eggNOG-mapper	UHGV-1398431_28	1449050.JNLE01000003_gene2104	70.9	0.0000000000000851	Putative peptidoglycan binding domain	N/A
Pfam	UHGV-1398431_28	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
COG	UHGV-1398431_28	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A