UHGV-1401221 (vOTU-115711)

Viral Genome: UHGV-1401221

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1401221
vOTU ID	vOTU-115711
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0226120
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	54.1 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	11
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9795
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	15.71
Jumbo phage	No

Genome content
Genome length (bp)	32,590
GC content	40.89%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	63
CDS density	85%
Average CDS length (bps)	438.52
Total tRNA genes	3
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 54.1)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1401221_1	phrog_64	175.0	0	portal protein	head and packaging
UniRef90	UHGV-1401221_1	UniRef90_A0A416G2F2	796.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1401221_1	1298920.KI911353_gene2663	462.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1401221_1	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1401221_1	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1401221_2	phrog_36	51.0	0.000000000000029	transcriptional regulator	transcription regulation
COG	UHGV-1401221_2	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1401221_2	PF07374,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-1401221_3	phrog_38	148.1	5.74532e-44	terminase large subunit	head and packaging
UniRef90	UHGV-1401221_3	UniRef90_UPI001D009E65	969.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1401221_3	1121866.AUGK01000003_gene1428	236.0	0	chromosome segregation	N/A
NCBIFam	UHGV-1401221_3	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1401221_3	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1401221_3	PF17289,PF05876,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-1401221_11	phrog_236	93.2	5.4e-27	nucleotide kinase	other
UniRef90	UHGV-1401221_11	UniRef90_UPI001D04CE99	127.0	7.96e-37	N/A	N/A
eggNOG-mapper	UHGV-1401221_11	1236504.HMPREF2132_11120	76.6	2.1e-17	N/A	N/A
Pfam	UHGV-1401221_11	PF11753	N/A	N/A	N/A	DUF3310
PHROG	UHGV-1401221_12	phrog_229	113.1	2.6e-33	MazG-like pyrophosphatase	other
UniRef90	UHGV-1401221_12	UniRef90_D7GQL6	184.0	0	MazG nucleotide pyrophosphohydrolase domain	N/A
eggNOG-mapper	UHGV-1401221_12	411473.RUMCAL_00277	153.0	0	MazG nucleotide pyrophosphohydrolase domain	N/A
Pfam	UHGV-1401221_12	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-1401221_12	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-1401221_12	PF03819,MF_01020,NF001613,COG0140	N/A	N/A	N/A	N/A
UniRef90	UHGV-1401221_14	UniRef90_A0A8D9UIS5	129.0	1.76e-33	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1401221_14	658655.HMPREF0988_00895	136.0	2.3e-38	N/A	N/A
structural_annotation	UHGV-1401221_14	PF16677	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1401221_15	411470.RUMGNA_03786	84.0	3.45e-19	Helix-turn-helix XRE-family like proteins	N/A
COG	UHGV-1401221_15	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
eggNOG-mapper	UHGV-1401221_17	1235799.C818_04245	69.7	0.00000000000000106	N/A	N/A
PHROG	UHGV-1401221_18	phrog_31631	65.2	6.7e-19	N/A	unknown function
PHROG	UHGV-1401221_23	phrog_1233	47.7	0.00000000000027	N/A	unknown function
eggNOG-mapper	UHGV-1401221_23	658655.HMPREF0988_00914	124.0	2.08e-35	N/A	N/A
structural_annotation	UHGV-1401221_23	PF20352,COG2856	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1401221_24	658655.HMPREF0988_00915	161.0	0	N/A	N/A
PHROG	UHGV-1401221_25	phrog_20016	192.3	0	N/A	unknown function
UniRef90	UHGV-1401221_25	UniRef90_A0A285PT46	159.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1401221_25	397290.C810_05214	159.0	0	N/A	N/A
structural_annotation	UHGV-1401221_25	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1401221_26	phrog_16490	191.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1401221_26	397290.C810_01328	224.0	0	N/A	N/A
eggNOG-mapper	UHGV-1401221_27	476272.RUMHYD_01953	55.1	0.0000000049	N/A	N/A
PHROG	UHGV-1401221_28	phrog_21718	42.4	0.000000000011	N/A	unknown function
eggNOG-mapper	UHGV-1401221_28	658655.HMPREF0988_00919	120.0	2.36e-32	N/A	N/A
structural_annotation	UHGV-1401221_28	NF033819	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1401221_29	658655.HMPREF0988_00920	45.8	0.00000381	N/A	N/A
KOfam	UHGV-1401221_30	K14059	257.8	0	int; integrase	N/A
PHROG	UHGV-1401221_30	phrog_1	232.3	0	integrase	integration and excision
UniRef90	UHGV-1401221_30	UniRef90_UPI001BBE40F8	639.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1401221_30	411489.CLOL250_01458	631.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1401221_30	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1401221_30	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1401221_30	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1401221_30	PF00589,PF02920,PF14659,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1401221_31	phrog_16129	73.1	1.6e-21	excisionase	integration and excision
UniRef90	UHGV-1401221_31	UniRef90_R6C2W3	186.0	0	DNA binding domain excisionase family	N/A
eggNOG-mapper	UHGV-1401221_31	411489.CLOL250_01459	94.0	1.52e-23	Excisionase from transposon Tn916	N/A
Pfam	UHGV-1401221_31	PF09035	N/A	N/A	Excisionase from transposon Tn916	Tn916-Xis
structural_annotation	UHGV-1401221_31	PF09035,PF00196,MF_00674,NF033787,NF008895,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-1401221_33	phrog_9804	170.1	0	N/A	unknown function
UniRef90	UHGV-1401221_33	UniRef90_A0A3A6JKE0	206.0	0	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-1401221_33	626523.GCWU000342_01038	134.0	4.68e-37	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-1401221_33	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
PHROG	UHGV-1401221_34	phrog_1163	112.0	7.2e-33	N/A	unknown function
UniRef90	UHGV-1401221_34	UniRef90_UPI000BE3968F	102.0	3.7e-24	conserved phage C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1401221_34	1304866.K413DRAFT_1200	101.0	4.2e-24	Conserved phage C-terminus (Phg_2220_C)	N/A
Pfam	UHGV-1401221_34	PF09524	N/A	N/A	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
NCBIFam	UHGV-1401221_34	TIGR02220.1	N/A	N/A	phage conserved hypothetical protein, C-terminal domain	N/A
COG	UHGV-1401221_34	COG1846	N/A	N/A	DNA-binding transcriptional regulator, MarR family	N/A
PHROG	UHGV-1401221_37	phrog_954	247.5	0	DNA methyltransferase	other
UniRef90	UHGV-1401221_37	UniRef90_A0A413RZZ9	273.0	0	Class I SAM-dependent methyltransferase	N/A
eggNOG-mapper	UHGV-1401221_37	1321779.HMPREF1984_00119	249.0	0	methyltransferase	N/A
PADLOC	UHGV-1401221_37	MTase_II_00074	241.9	0	Type II methyltransferase	RM
Pfam	UHGV-1401221_37	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-1401221_37	COG0500	N/A	N/A	SAM-dependent methyltransferase	N/A
structural_annotation	UHGV-1401221_37	PF05148,MF_03044,NF033398,COG1041	N/A	N/A	N/A	N/A
PHROG	UHGV-1401221_38	phrog_19106	247.0	0	N/A	unknown function
UniRef90	UHGV-1401221_38	UniRef90_A0A1C5S1S5	271.0	0	Group I intron endonuclease	N/A
eggNOG-mapper	UHGV-1401221_38	397290.C810_01509	264.0	0	N/A	N/A
structural_annotation	UHGV-1401221_38	TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-1401221_39	phrog_17690	117.1	7.7e-35	N/A	unknown function
UniRef90	UHGV-1401221_39	UniRef90_A0A6L5XWF4	124.0	6.78e-34	3-dehydroquinate synthase	N/A
eggNOG-mapper	UHGV-1401221_39	1235798.C817_03495	156.0	0	N/A	N/A
UniRef90	UHGV-1401221_40	UniRef90_UPI001C02F342	89.0	9.52e-20	N/A	N/A
eggNOG-mapper	UHGV-1401221_40	397290.C810_01514	52.0	0.000000895	N/A	N/A
PHROG	UHGV-1401221_43	phrog_874	203.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1401221_43	411468.CLOSCI_00298	171.0	0	N/A	N/A
Pfam	UHGV-1401221_43	PF04266	N/A	N/A	ASCH domain	ASCH
structural_annotation	UHGV-1401221_43	PF04266,MF_00684,NF003443,COG3097	N/A	N/A	N/A	N/A
PHROG	UHGV-1401221_44	phrog_20593	50.5	0.000000000000034	N/A	unknown function
AcrCatalog	UHGV-1401221_44	cluster_27421	35.0	0.0000214	NA	N/A
UniRef90	UHGV-1401221_45	UniRef90_A0A1C5RYU8	119.0	4.45e-34	Restriction alleviation protein, Lar family	N/A
structural_annotation	UHGV-1401221_45	NF007260	N/A	N/A	N/A	N/A
PHROG	UHGV-1401221_46	phrog_26165	54.6	0.0000000000000019	N/A	unknown function
KOfam	UHGV-1401221_48	K00558	173.9	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1401221_48	phrog_116	191.5	0	DNA methyltransferase	other
UniRef90	UHGV-1401221_48	UniRef90_A0A373C6Y8	544.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-1401221_48	180332.JTGN01000023_gene1615	510.0	0	Cytosine-specific methyltransferase	N/A
PADLOC	UHGV-1401221_48	MTase_II_00058	163.5	0	Type II methyltransferase	RM
Pfam	UHGV-1401221_48	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1401221_48	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1401221_48	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1401221_48	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-1401221_49	K00390	82.1	5.6e-25	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1401221_49	phrog_424	94.2	1e-27	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1401221_49	UniRef90_A0A373SW63	666.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-1401221_49	1235800.C819_02256	599.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-1401221_49	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1401221_49	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1401221_49	PF01507,MF_00063,TIGR00434,COG0175	N/A	N/A	N/A	N/A
COG	UHGV-1401221_50	COG0241	N/A	N/A	Histidinol phosphatase/D-glycero-mannoheptose bisphosphatephosphatase, HAD superfamily	N/A
KOfam	UHGV-1401221_51	K03111	103.2	4.5e-30	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1401221_51	phrog_44	112.1	6.2e-33	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1401221_51	UniRef90_A0A1Y4IMA8	181.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1401221_51	742723.HMPREF9477_01387	176.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1401221_51	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1401221_51	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1401221_51	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1401221_51	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1401221_51	PF00436,MF_00984,NF005242,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-1401221_53	K06167	54.0	0.0000000000000023	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-1401221_53	phrog_392	181.6	0	metal-dependent hydrolase	other
UniRef90	UHGV-1401221_53	UniRef90_UPI001BC4CEB0	326.0	0	MBL fold metallo-hydrolase	N/A
eggNOG-mapper	UHGV-1401221_53	397290.C810_01486	155.0	3.50325e-44	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
Pfam	UHGV-1401221_53	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
dbAPIS	UHGV-1401221_53	APIS058	N/A	N/A	N/A	N/A
COG	UHGV-1401221_53	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-1401221_53	PF02112,MF_01818,NF041851,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-1401221_56	phrog_25456	53.0	8.2e-18	N/A	unknown function
KOfam	UHGV-1401221_57	K06940	54.7	0.000000000000002	N/A	N/A
PHROG	UHGV-1401221_57	phrog_32498	148.6	1.68156e-44	N/A	unknown function
UniRef90	UHGV-1401221_57	UniRef90_A0A173SAY4	146.0	5.85743e-43	Flagellin N-methylase	N/A
eggNOG-mapper	UHGV-1401221_57	397290.C810_01479	139.0	5.70006e-41	Putative zinc- or iron-chelating domain	N/A
Pfam	UHGV-1401221_57	PF03692	N/A	N/A	Putative zinc- or iron-chelating domain	CxxCxxCC
PHROG	UHGV-1401221_58	phrog_561	177.9	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1401221_58	UniRef90_UPI001904C527	201.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-1401221_58	537013.CLOSTMETH_01715	211.0	0	N/A	N/A
Pfam	UHGV-1401221_58	PF03837	N/A	N/A	RecT family	RecT
structural_annotation	UHGV-1401221_58	NF007351,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-1401221_59	phrog_3377	135.2	4.39999e-40	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1401221_59	UniRef90_A0A380IPI2	108.0	3.14e-27	AP2 domain protein	N/A
eggNOG-mapper	UHGV-1401221_59	742767.HMPREF9456_02044	120.0	1.24e-32	N/A	N/A
PHROG	UHGV-1401221_60	phrog_9958	98.7	5e-29	N/A	unknown function
UniRef90	UHGV-1401221_60	UniRef90_F7JKD2	99.0	1.27e-22	N/A	N/A
eggNOG-mapper	UHGV-1401221_60	658655.HMPREF0988_00873	99.0	2.14e-23	N/A	N/A
structural_annotation	UHGV-1401221_60	PF19789	N/A	N/A	N/A	N/A
KOfam	UHGV-1401221_63	K19171	48.8	0.000000000000071	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-1401221_63	phrog_21084	80.9	1.4e-23	recombinase	other
UniRef90	UHGV-1401221_63	UniRef90_A0A413Z5U6	139.0	3.42e-33	AAA_23 domain-containing protein	N/A
eggNOG-mapper	UHGV-1401221_63	397290.C810_01461	194.0	0	nuclear chromosome segregation	N/A
COG	UHGV-1401221_63	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A