UHGV-1401308 (vOTU-120323)

Viral Genome: UHGV-1401308

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1401308
vOTU ID	vOTU-120323
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0128864
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	53.19 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9815
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	19.97
Jumbo phage	No

Genome content
Genome length (bp)	18,088
GC content	41.27%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	22
CDS density	95%
Average CDS length (bps)	781.36
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 53.19)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1401308_1	phrog_200	47.4	0.00000000000032	lipoprotein	other
UniRef90	UHGV-1401308_1	UniRef90_A0A139PKF5	185.0	0	Membrane protease family protein	N/A
eggNOG-mapper	UHGV-1401308_1	1095737.HMPREF1110_1217	185.0	0	SPFH domain / Band 7 family	N/A
COG	UHGV-1401308_1	COG0330	N/A	N/A	Regulator of protease activity HflC, stomatin/prohibitin superfamily	N/A
PHROG	UHGV-1401308_2	phrog_248	139.2	1.99993e-41	transcriptional activator	transcription regulation
UniRef90	UHGV-1401308_2	UniRef90_A0A139PKG9	276.0	0	N/A	N/A
eggNOG-mapper	UHGV-1401308_2	768726.HMPREF9178_1071	248.0	0	Transcriptional regulator, ArpU family	N/A
NCBIFam	UHGV-1401308_2	TIGR01637.1	N/A	N/A	ArpU family phage packaging/lysis transcriptional regulator	N/A
structural_annotation	UHGV-1401308_2	PF05263,MF_00674,TIGR01637,COG1191	N/A	N/A	N/A	N/A
KOfam	UHGV-1401308_3	K04763	100.4	2.4e-29	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-1401308_3	phrog_216	179.9	0	integrase	integration and excision
UniRef90	UHGV-1401308_3	UniRef90_A0A0E8AH00	375.0	0	Gp32	N/A
eggNOG-mapper	UHGV-1401308_3	585203.SMSK564_1292	290.0	0	Phage integrase family	N/A
Pfam	UHGV-1401308_3	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1401308_3	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1401308_3	PF00589,MF_02055,NF040815,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-1401308_4	phrog_338	115.2	6.7e-34	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1401308_4	UniRef90_C1C9P3	238.0	0	HNH endonuclease domain protein	N/A
eggNOG-mapper	UHGV-1401308_4	157924.Q7Y4J1_9CAUD	208.0	0	HNH endonuclease	N/A
Pfam	UHGV-1401308_4	PF01844	N/A	N/A	HNH endonuclease	HNH
structural_annotation	UHGV-1401308_4	PF01844,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-1401308_5	phrog_104	325.4	0	portal protein	head and packaging
UniRef90	UHGV-1401308_5	UniRef90_A0A4J1ZT89	814.0	0	Gp34	N/A
eggNOG-mapper	UHGV-1401308_5	1069534.LRC_07240	643.0	0	Phage portal protein, SPP1 Gp6-like	N/A
structural_annotation	UHGV-1401308_5	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1401308_6	phrog_7104	935.6	0	N/A	unknown function
UniRef90	UHGV-1401308_6	UniRef90_A0A0E8ZU68	840.0	0	Gp35	N/A
eggNOG-mapper	UHGV-1401308_6	585203.SMSK564_1288	703.0	0	N/A	N/A
structural_annotation	UHGV-1401308_6	PF03496	N/A	N/A	N/A	N/A
PHROG	UHGV-1401308_7	phrog_6473	142.4	6.40393e-43	N/A	unknown function
eggNOG-mapper	UHGV-1401308_7	864570.HMPREF9189_1691	87.8	1.45e-21	N/A	N/A
PHROG	UHGV-1401308_8	phrog_7268	154.8	0	N/A	unknown function
PHROG	UHGV-1401308_9	phrog_17688	516.9	0	N/A	unknown function
UniRef90	UHGV-1401308_9	UniRef90_A0A0E8ZYE1	932.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1401308_9	768726.HMPREF9178_1065	855.0	0	phage terminase, large subunit	N/A
COG	UHGV-1401308_9	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1401308_9	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1401308_10	phrog_36217	235.7	0	N/A	unknown function
UniRef90	UHGV-1401308_10	UniRef90_A0A139PKI3	266.0	0	Phage capsid and scaffold	N/A
eggNOG-mapper	UHGV-1401308_10	768726.HMPREF9178_1064	171.0	0	N/A	N/A
Pfam	UHGV-1401308_10	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1401308_10	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1401308_11	phrog_32396	165.7	0	N/A	unknown function
UniRef90	UHGV-1401308_11	UniRef90_A0A1F1CDF1	569.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1401308_11	1121864.OMO_02152	504.0	0	Phage capsid family	N/A
NCBIFam	UHGV-1401308_11	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-1401308_11	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1401308_12	phrog_1539	72.8	4.2e-21	Arc-like repressor	transcription regulation
UniRef90	UHGV-1401308_12	UniRef90_A0A120MHA4	103.0	1.03e-27	HeH domain-containing protein	N/A
structural_annotation	UHGV-1401308_12	PF12949	N/A	N/A	N/A	N/A
PHROG	UHGV-1401308_13	phrog_137	143.4	5.60519e-43	head-tail adaptor Ad1	connector
UniRef90	UHGV-1401308_13	UniRef90_A0A0T8PI38	280.0	0	Gp42	N/A
eggNOG-mapper	UHGV-1401308_13	585203.SMSK564_1282	199.0	0	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-1401308_13	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-1401308_13	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-1401308_14	phrog_501	103.7	1.2e-30	head closure Hc1	connector
UniRef90	UHGV-1401308_14	UniRef90_A0A139NBR3	176.0	0	Phage-associated protein	N/A
eggNOG-mapper	UHGV-1401308_14	1321820.HMPREF1983_00930	172.0	0	N/A	N/A
structural_annotation	UHGV-1401308_14	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1401308_15	phrog_387	89.6	2.2e-26	neck protein	connector
UniRef90	UHGV-1401308_15	UniRef90_A0A0E9GXC0	143.0	2.67648e-43	N/A	N/A
eggNOG-mapper	UHGV-1401308_15	12390.Q77MU9_9CAUD	55.8	0.00000000242	N/A	N/A
PHROG	UHGV-1401308_16	phrog_123	67.8	1.9e-19	tail terminator	connector
UniRef90	UHGV-1401308_16	UniRef90_A0A0E8ZUI3	226.0	0	Gp45	N/A
eggNOG-mapper	UHGV-1401308_16	585203.SMSK564_1280	171.0	0	N/A	N/A
structural_annotation	UHGV-1401308_16	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-1401308_17	phrog_117	181.0	0	major tail protein	tail
UniRef90	UHGV-1401308_17	UniRef90_A0A1S5SD31	339.0	0	Major tail protein	N/A
eggNOG-mapper	UHGV-1401308_17	585203.SMSK564_1279	353.0	0	domain, Protein	N/A
COG	UHGV-1401308_17	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1401308_17	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1401308_18	phrog_1526	78.5	7e-23	N/A	unknown function
UniRef90	UHGV-1401308_18	UniRef90_A0A0E9GVS8	77.4	1.39e-16	N/A	N/A
eggNOG-mapper	UHGV-1401308_18	883110.HMPREF9260_00652	69.3	0.0000000000000346	N/A	N/A
PHROG	UHGV-1401308_19	phrog_1633	175.3	0	N/A	unknown function
UniRef90	UHGV-1401308_19	UniRef90_UPI00156526D2	204.0	0	N/A	N/A
eggNOG-mapper	UHGV-1401308_19	585203.SMSK564_1277	223.0	0	N/A	N/A
Pfam	UHGV-1401308_19	PF17318	N/A	N/A	N/A	DUF5361
structural_annotation	UHGV-1401308_19	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-1401308_20	phrog_58	403.3	0	tail length tape measure protein	tail
UniRef90	UHGV-1401308_20	UniRef90_UPI000DDBE472	985.0	0	PblA	N/A
eggNOG-mapper	UHGV-1401308_20	585203.SMSK564_1276	858.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-1401308_20	PF05017	N/A	N/A	TMP repeat	TMP
COG	UHGV-1401308_20	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1401308_20	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-1401308_21	phrog_33	67.1	4.4e-19	distal tail protein Dit	tail
UniRef90	UHGV-1401308_21	UniRef90_V8IJG6	422.0	0	Adenylosuccinate synthetase	N/A
eggNOG-mapper	UHGV-1401308_21	1054460.SPPN_00450	422.0	0	N/A	N/A
COG	UHGV-1401308_21	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1401308_21	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1401308_22	phrog_2270	853.2	0	N/A	unknown function
UniRef90	UHGV-1401308_22	UniRef90_UPI0005DBBB99	1657.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-1401308_22	1566990.A0A0A0YV37_9CAUD	1014.0	0	N-acetylmuramoyl-L-alanine amidase activity	N/A
Pfam	UHGV-1401308_22	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1401308_22	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A