UHGV-1402953 (vOTU-130884)

Viral Genome: UHGV-1402953

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1402953
vOTU ID	vOTU-130884
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0202838
Associated BioSample	SAMEA2338641
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	63.21 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9817
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	32.67
Jumbo phage	No

Genome content
Genome length (bp)	28,477
GC content	41.64%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	41
CDS density	88%
Average CDS length (bps)	612.44
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 63.21)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1402953_1	phrog_3754	64.6	1.6e-18	N/A	unknown function
eggNOG-mapper	UHGV-1402953_1	476272.RUMHYD_01764	131.0	1.71e-38	N/A	N/A
UniRef90	UHGV-1402953_2	UniRef90_A0A395X7A4	178.0	0	CTP synthase	N/A
eggNOG-mapper	UHGV-1402953_2	476272.RUMHYD_01766	120.0	3.06e-34	N/A	N/A
PHROG	UHGV-1402953_3	phrog_21718	132.9	1.3e-39	N/A	unknown function
eggNOG-mapper	UHGV-1402953_3	476272.RUMHYD_01768	130.0	1.13e-36	N/A	N/A
PHROG	UHGV-1402953_4	phrog_22984	96.9	1.1e-28	N/A	unknown function
PHROG	UHGV-1402953_5	phrog_16490	194.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1402953_5	397290.C810_01328	172.0	0	N/A	N/A
PHROG	UHGV-1402953_6	phrog_20016	203.6	0	N/A	unknown function
UniRef90	UHGV-1402953_6	UniRef90_A0A285PT46	167.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1402953_6	397290.C810_05214	186.0	0	N/A	N/A
structural_annotation	UHGV-1402953_6	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1402953_7	phrog_28802	220.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1402953_7	476272.RUMHYD_01772	196.0	0	N/A	N/A
PHROG	UHGV-1402953_8	phrog_194	66.9	3.7e-19	head scaffolding protein	head and packaging
UniRef90	UHGV-1402953_8	UniRef90_UPI001D14C9C8	185.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1402953_8	476272.RUMHYD_01775	192.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-1402953_8	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-1402953_9	phrog_544	170.1	0	major head protein	head and packaging
UniRef90	UHGV-1402953_9	UniRef90_A0A395X7A1	724.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1402953_9	1232453.BAIF02000011_gene3359	387.0	0	N/A	N/A
Pfam	UHGV-1402953_9	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-1402953_9	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1402953_10	phrog_541	96.1	1.7e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-1402953_10	476272.RUMHYD_01778	113.0	1.25e-29	N/A	N/A
PHROG	UHGV-1402953_12	phrog_1129	75.8	3.5e-22	holin	lysis
UniRef90	UHGV-1402953_12	UniRef90_A0A395X7B2	174.0	0	Enolase	N/A
eggNOG-mapper	UHGV-1402953_12	411461.DORFOR_00721	113.0	1.02e-31	N/A	N/A
Pfam	UHGV-1402953_12	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1402953_12	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1402953_13	phrog_3366	95.8	3.9e-28	N/A	unknown function
eggNOG-mapper	UHGV-1402953_13	476272.RUMHYD_01779	156.0	0	N/A	N/A
structural_annotation	UHGV-1402953_13	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1402953_14	phrog_556	63.1	3e-18	minor head protein	head and packaging
UniRef90	UHGV-1402953_14	UniRef90_UPI000E4989EB	290.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1402953_14	476272.RUMHYD_01780	156.0	0	N/A	N/A
Pfam	UHGV-1402953_14	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1402953_14	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1402953_15	phrog_3266	94.1	1e-27	tail completion	connector
eggNOG-mapper	UHGV-1402953_15	476272.RUMHYD_01781	152.0	5.60519e-45	N/A	N/A
structural_annotation	UHGV-1402953_15	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1402953_16	phrog_3099	130.6	9.8e-39	N/A	unknown function
eggNOG-mapper	UHGV-1402953_16	411902.CLOBOL_00129	170.0	0	N/A	N/A
structural_annotation	UHGV-1402953_16	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1402953_17	phrog_11299	70.0	3.4e-20	N/A	unknown function
structural_annotation	UHGV-1402953_17	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1402953_18	phrog_706	132.9	2.1e-39	N/A	unknown function
UniRef90	UHGV-1402953_18	UniRef90_UPI001BAD00AD	213.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1402953_18	411459.RUMOBE_01383	347.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1402953_18	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1402953_18	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1402953_19	phrog_1535	479.4	0	tail length tape measure protein	tail
UniRef90	UHGV-1402953_19	UniRef90_A0A173R880	832.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1402953_19	476272.RUMHYD_01785	821.0	0	phage tail tape measure protein	N/A
COG	UHGV-1402953_19	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1402953_19	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1402953_20	phrog_1194	85.5	4.4e-25	N/A	unknown function
eggNOG-mapper	UHGV-1402953_20	1122918.KB907248_gene4488	52.8	0.000000437	N/A	N/A
structural_annotation	UHGV-1402953_20	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1402953_21	phrog_6616	656.3	0	tail protein	tail
UniRef90	UHGV-1402953_21	UniRef90_UPI001D07A50C	683.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-1402953_21	33035.JPJF01000043_gene1002	248.0	0	N/A	N/A
structural_annotation	UHGV-1402953_21	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1402953_22	phrog_18444	76.8	1.7e-22	N/A	unknown function
UniRef90	UHGV-1402953_22	UniRef90_UPI00156E9A45	74.3	3.37e-16	peptide chain release factor 2	N/A
UniRef90	UHGV-1402953_23	UniRef90_UPI001C0EBDDC	157.0	0	pyocin knob domain-containing protein	N/A
KOfam	UHGV-1402953_24	K07273	201.0	0	acm; lysozyme	N/A
PHROG	UHGV-1402953_24	phrog_6745	168.9	0	endolysin	lysis
UniRef90	UHGV-1402953_24	UniRef90_UPI0018972B9E	666.0	0	peptidoglycan-binding protein	N/A
eggNOG-mapper	UHGV-1402953_24	1121115.AXVN01000006_gene2170	386.0	0	autolytic lysozime (1,4-beta-N-acetylmuramidase), family 25 of glycosyl hydrolases	N/A
Pfam	UHGV-1402953_24	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-1402953_24	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1402953_24	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-1402953_24	PF01183,PF05382,NF003627,TIGR02219,COG3757	N/A	N/A	N/A	N/A
KOfam	UHGV-1402953_25	K14059	97.2	2.3e-28	int; integrase	N/A
PHROG	UHGV-1402953_25	phrog_1	128.1	8.2e-38	integrase	integration and excision
UniRef90	UHGV-1402953_25	UniRef90_A0A6L8SXX0	778.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1402953_25	1235792.C808_05256	358.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1402953_25	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1402953_25	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1402953_25	PF00589,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1402953_26	phrog_8545	67.1	2.3e-19	superinfection exclusion Sie-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1402953_26	UniRef90_UPI001C0EAFDF	232.0	0	OB-fold putative lipoprotein	N/A
eggNOG-mapper	UHGV-1402953_26	1304866.K413DRAFT_0836	163.0	0	tRNA_anti-like	N/A
Pfam	UHGV-1402953_26	PF12869	N/A	N/A	tRNA_anti-like	tRNA_anti-like
structural_annotation	UHGV-1402953_26	PF12869,PF10571,MF_01959,TIGR03943,COG5235	N/A	N/A	N/A	N/A
KOfam	UHGV-1402953_27	K18830	63.0	4.3e-18	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1402953_27	phrog_8	52.2	0.0000000000000042	transcriptional regulator	transcription regulation
UniRef90	UHGV-1402953_27	UniRef90_R5GZQ0	135.0	6.8e-39	Helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1402953_27	748224.HMPREF9436_01444	129.0	9.24e-37	N/A	N/A
PADLOC	UHGV-1402953_27	retron_type_VI_hth_cluster2_1	46.0	0.00000000000021	N/A	Retron
Pfam	UHGV-1402953_27	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1402953_27	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1402953_27	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1402953_28	1235790.C805_00014	46.2	0.00000402	N/A	N/A
PHROG	UHGV-1402953_31	phrog_463	195.8	0	anti-repressor	transcription regulation
UniRef90	UHGV-1402953_31	UniRef90_A0A3A6GZT3	361.0	0	Phage repressor protein	N/A
eggNOG-mapper	UHGV-1402953_31	411490.ANACAC_00813	206.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1402953_31	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1402953_31	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-1402953_31	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1402953_31	PF10552,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-1402953_32	phrog_6058	53.1	0.0000000000000032	N/A	unknown function
UniRef90	UHGV-1402953_32	UniRef90_A0A2V1JQ38	65.1	0.0000000000112	Glycogen synthase	N/A
eggNOG-mapper	UHGV-1402953_32	742733.HMPREF9469_05094	62.0	0.0000000000302	N/A	N/A
structural_annotation	UHGV-1402953_37	NF011879	N/A	N/A	N/A	N/A
UniRef90	UHGV-1402953_39	UniRef90_R6RDX0	77.8	1.51e-17	Arginyl-tRNA synthetase	N/A
PHROG	UHGV-1402953_40	phrog_2872	164.7	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1402953_40	UniRef90_A0A8F2J9K2	297.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1402953_40	1304866.K413DRAFT_0827	224.0	0	AAA domain	N/A
Pfam	UHGV-1402953_40	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-1402953_40	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A