UHGV-1403792 (vOTU-075249)

Viral Genome: UHGV-1403792

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1403792
vOTU ID	vOTU-075249
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0252572
Associated BioSample	SAMEA4545287
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	94.74 (High-quality)
Trimmed provirus	No
CheckV viral markers	20
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.979
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	23.73
Jumbo phage	No

Genome content
Genome length (bp)	37,172
GC content	30.82%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	71
CDS density	94%
Average CDS length (bps)	489.72
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 94.74)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-1403792_3	PF17340	N/A	N/A	N/A	N/A
PHROG	UHGV-1403792_9	phrog_7566	79.1	4.1e-23	N/A	unknown function
UniRef90	UHGV-1403792_9	UniRef90_A0A3R6TI62	52.8	0.000000711	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-1403792_9	508419.F8J187_9CAUD	91.7	5.41e-23	N/A	N/A
KOfam	UHGV-1403792_10	K01160	41.4	0.000000000032	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1403792_10	phrog_34	46.6	0.00000000000067	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1403792_10	UniRef90_A0A380NJ89	51.6	0.00000619	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-1403792_10	508419.F8J189_9CAUD	65.5	0.0000000000045	magnesium ion binding	N/A
structural_annotation	UHGV-1403792_10	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-1403792_11	K03497	69.0	1e-19	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1403792_11	phrog_620	186.4	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1403792_11	UniRef90_A0A4D5ZZJ2	173.0	0	DNA modification methylase	N/A
eggNOG-mapper	UHGV-1403792_11	173707.Q938L7_9CAUD	169.0	0	helicase activity	N/A
PADLOC	UHGV-1403792_11	MTase_II_00015	98.2	1.4e-28	Type II methyltransferase	RM
Pfam	UHGV-1403792_11	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
structural_annotation	UHGV-1403792_11	PF02195,TIGR00180,COG5119	N/A	N/A	N/A	N/A
PHROG	UHGV-1403792_12	phrog_842	49.1	0.000000000000086	beta-glucosyl-HMC-alpha-glucosyltransferase	other
Pfam	UHGV-1403792_12	PF20691	N/A	N/A	TET-Associated Glycosyltransferase	TAGT
structural_annotation	UHGV-1403792_12	PF20691,MF_00057,NF038299,COG1216	N/A	N/A	N/A	N/A
PHROG	UHGV-1403792_13	phrog_13321	72.0	5.2e-21	N/A	unknown function
UniRef90	UHGV-1403792_13	UniRef90_A0A1C6IFA0	371.0	0	Radical SAM superfamily	N/A
eggNOG-mapper	UHGV-1403792_13	1122971.BAME01000006_gene910	416.0	0	DNA photolyase activity	N/A
COG	UHGV-1403792_13	COG1533	N/A	N/A	DNA repair photolyase	N/A
structural_annotation	UHGV-1403792_13	PF20903,MF_01865,NF033668,COG2100	N/A	N/A	N/A	N/A
PHROG	UHGV-1403792_14	phrog_1569	205.3	0	N/A	unknown function
UniRef90	UHGV-1403792_14	UniRef90_A0A0R2KH98	373.0	0	S-AdoMet_synt_N domain-containing protein	N/A
eggNOG-mapper	UHGV-1403792_14	1122146.AUHP01000010_gene1050	373.0	0	S-adenosylmethionine synthetase, N-terminal domain	N/A
Pfam	UHGV-1403792_14	PF00438	N/A	N/A	S-adenosylmethionine synthetase, N-terminal domain	S-AdoMet_synt_N
COG	UHGV-1403792_14	COG0192	N/A	N/A	S-adenosylmethionine synthetase	N/A
structural_annotation	UHGV-1403792_14	PF01941,MF_00086,TIGR01034,COG0192	N/A	N/A	N/A	N/A
PHROG	UHGV-1403792_18	phrog_2412	107.9	7.7e-32	N/A	unknown function
UniRef90	UHGV-1403792_18	UniRef90_A0A412PL59	82.0	2.39e-17	Stress-induced protein	N/A
eggNOG-mapper	UHGV-1403792_18	226185.EF_2113	72.0	0.000000000000023	Stress-induced bacterial acidophilic repeat motif	N/A
Pfam	UHGV-1403792_18	PF10685	N/A	N/A	Stress-induced bacterial acidophilic repeat motif	KGG
KOfam	UHGV-1403792_19	K06909	375.4	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1403792_19	phrog_3717	169.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1403792_19	UniRef90_A0A0R3JYL5	555.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1403792_19	203119.Cthe_2474	551.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1403792_19	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1403792_19	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1403792_19	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1403792_19	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1403792_19	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
Pfam	UHGV-1403792_21	PF00535	N/A	N/A	Glycosyl transferase family 2	Glycos_transf_2
COG	UHGV-1403792_21	COG1216	N/A	N/A	Glycosyltransferase, GT2 family	N/A
PHROG	UHGV-1403792_22	phrog_64	245.1	0	portal protein	head and packaging
UniRef90	UHGV-1403792_22	UniRef90_R6I230	355.0	0	SPP1 family phage portal protein	N/A
eggNOG-mapper	UHGV-1403792_22	665956.HMPREF1032_03614	272.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1403792_22	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1403792_22	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
UniRef90	UHGV-1403792_23	UniRef90_R5MSH4	189.0	0	Phage head morphogenesis protein SPP1 gp7 family	N/A
NCBIFam	UHGV-1403792_23	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1403792_23	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1403792_23	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1403792_24	phrog_172	92.2	6.8e-27	head scaffolding protein	head and packaging
UniRef90	UHGV-1403792_24	UniRef90_A0A3D1PKZ2	89.7	4.77e-19	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1403792_24	1280689.AUJC01000003_gene966	79.7	8.83e-16	N/A	N/A
Pfam	UHGV-1403792_24	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1403792_24	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1403792_25	phrog_422	206.7	0	major head protein	head and packaging
UniRef90	UHGV-1403792_25	UniRef90_A0A844FIN2	293.0	0	Cadherin domain-containing protein	N/A
eggNOG-mapper	UHGV-1403792_25	1230342.CTM_21658	281.0	0	N/A	N/A
structural_annotation	UHGV-1403792_25	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
Pfam	UHGV-1403792_27	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1403792_27	PF05135,TIGR01560	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1403792_28	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1403792_29	phrog_5	53.8	0.0000000000000051	tail completion or Neck1 protein	connector
Pfam	UHGV-1403792_29	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1403792_30	PF09646	N/A	N/A	N/A	N/A
PHROG	UHGV-1403792_31	phrog_158	45.8	0.0000000000011	major tail protein	tail
UniRef90	UHGV-1403792_31	UniRef90_A0A1M6AH52	75.1	0.0000000000000184	Phage tail tube protein, TTP	N/A
eggNOG-mapper	UHGV-1403792_31	445974.CLORAM_02924	79.0	9.96e-17	Phage tail tube protein, TTP	N/A
structural_annotation	UHGV-1403792_31	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-1403792_32	UniRef90_UPI001C0F5884	60.5	0.00000000326	N/A	N/A
structural_annotation	UHGV-1403792_32	PF19591	N/A	N/A	N/A	N/A
COG	UHGV-1403792_34	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-1403792_35	phrog_1194	43.3	0.0000000000049	N/A	unknown function
Pfam	UHGV-1403792_35	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1403792_35	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1403792_36	phrog_13879	92.1	2.9e-27	N/A	unknown function
structural_annotation	UHGV-1403792_36	PF14594,PF00754,NF033848,COG3500,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-1403792_38	phrog_9116	126.0	7e-38	tail protein	tail
UniRef90	UHGV-1403792_38	UniRef90_UPI000AA230C0	100.0	2.55e-20	tail fiber protein	N/A
eggNOG-mapper	UHGV-1403792_38	694427.Palpr_1970	123.0	3.83e-28	tail collar domain protein	N/A
Pfam	UHGV-1403792_38	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
Pfam	UHGV-1403792_38	PF21454	N/A	N/A	Major structural protein 1, jelly-roll domain	MSP1_barrel
COG	UHGV-1403792_38	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-1403792_40	phrog_918	109.6	1e-32	N/A	unknown function
UniRef90	UHGV-1403792_40	UniRef90_UPI001F22DD3C	121.0	5.29e-34	N/A	N/A
eggNOG-mapper	UHGV-1403792_40	1499683.CCFF01000014_gene3910	115.0	1.2e-32	N/A	N/A
Pfam	UHGV-1403792_40	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1403792_40	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-1403792_41	phrog_8781	53.8	0.0000000000000022	endolysin	lysis
UniRef90	UHGV-1403792_41	UniRef90_A0A350H3V1	121.0	5.62e-30	Peptidase C51 domain-containing protein	N/A
COG	UHGV-1403792_41	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1403792_41	PF05382,NF033742,COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-1403792_42	phrog_4105	42.0	0.000000000016	N/A	unknown function
UniRef90	UHGV-1403792_45	UniRef90_UPI0004E194C7	48.5	0.00000544	LuxR C-terminal-related transcriptional regulator	N/A
structural_annotation	UHGV-1403792_45	PF04545,MF_00245,NF001067,COG2771	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1403792_47	476272.RUMHYD_01954	57.4	0.000000381	N/A	N/A
eggNOG-mapper	UHGV-1403792_49	1378168.N510_03079	55.8	0.000000304	N/A	N/A
PHROG	UHGV-1403792_50	phrog_6254	91.9	7.1e-27	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1403792_50	UniRef90_UPI000BF65752	107.0	9.32e-26	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1403792_50	1134413.ANNK01000120_gene2048	85.9	1.13e-18	response regulator	N/A
PADLOC	UHGV-1403792_50	HEase_00033	58.6	2e-16	homing endonuclease	RM
Pfam	UHGV-1403792_50	PF13392	N/A	N/A	HNH endonuclease	HNH_3
COG	UHGV-1403792_50	COG2197	N/A	N/A	DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains	N/A
structural_annotation	UHGV-1403792_50	PF13392	N/A	N/A	N/A	N/A
Pfam	UHGV-1403792_54	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
structural_annotation	UHGV-1403792_56	PF17790,NF011770	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1403792_58	PF16938	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1403792_60	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1403792_61	phrog_428	191.9	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1403792_61	UniRef90_UPI00135AD932	164.0	0	conserved phage C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1403792_61	358681.BBR47_29040	135.0	1.17e-35	N/A	N/A
Pfam	UHGV-1403792_61	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
Pfam	UHGV-1403792_61	PF09524	N/A	N/A	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
NCBIFam	UHGV-1403792_61	TIGR02220.1	N/A	N/A	phage conserved hypothetical protein, C-terminal domain	N/A
COG	UHGV-1403792_61	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1403792_61	PF02334,MF_01909,NF040939,COG1675	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1403792_62	PF01104,NF041014	N/A	N/A	N/A	N/A
PHROG	UHGV-1403792_64	phrog_98	78.5	7.1e-23	N/A	unknown function
UniRef90	UHGV-1403792_64	UniRef90_UPI0005DC0BAF	97.1	2.46e-23	YopX family protein	N/A
eggNOG-mapper	UHGV-1403792_64	1567011.A0A0A7RWK2_9VIRU	66.6	0.00000000000233	YopX protein	N/A
Pfam	UHGV-1403792_64	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1403792_64	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1403792_64	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1403792_65	phrog_1233	48.8	0.00000000000012	N/A	unknown function
UniRef90	UHGV-1403792_65	UniRef90_R7IWF8	93.2	2.1e-22	Peptidase_M78 domain-containing protein	N/A
PHROG	UHGV-1403792_68	phrog_11717	148.7	2.10195e-44	N/A	unknown function
eggNOG-mapper	UHGV-1403792_68	1399942.U3PCT3_9CAUD	147.0	4.11001e-41	N/A	N/A
Pfam	UHGV-1403792_68	PF20600	N/A	N/A	Exodeoxyribonuclease X-like C-terminal	ExoX-like_C
Pfam	UHGV-1403792_69	PF07104	N/A	N/A	N/A	DUF1366
KOfam	UHGV-1403792_71	K09882	139.7	5.79997e-42	cobS; cobaltochelatase CobS [EC:6.6.1.2]	N/A
PHROG	UHGV-1403792_71	phrog_249	221.0	0	porphyrin biosynthesis	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1403792_71	UniRef90_G2ZIS3	311.0	0	AAA_5 domain-containing protein	N/A
eggNOG-mapper	UHGV-1403792_71	402612.FP2177	201.0	0	AAA domain (dynein-related subfamily)	N/A
Pfam	UHGV-1403792_71	PF07728	N/A	N/A	AAA domain (dynein-related subfamily)	AAA_5
COG	UHGV-1403792_71	COG0714	N/A	N/A	MoxR-like ATPase	N/A