UHGV-1406026 (vOTU-034449)

Viral Genome: UHGV-1406026

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1406026
vOTU ID	vOTU-034449
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0196915
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	82.97 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9806
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	25.01
Jumbo phage	No

Genome content
Genome length (bp)	27,424
GC content	54.61%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	43
CDS density	94%
Average CDS length (bps)	597.77
Total tRNA genes	3
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 82.97)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1406026_4	phrog_824	151.6	1.4013e-45	N/A	unknown function
UniRef90	UHGV-1406026_4	UniRef90_A0A6N8GXS9	177.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1406026_4	665956.HMPREF1032_00132	150.0	8.40779e-45	VRR_NUC	N/A
Pfam	UHGV-1406026_4	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
KOfam	UHGV-1406026_6	K00390	102.7	3.9e-30	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1406026_6	phrog_424	123.2	1.9e-36	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1406026_6	UniRef90_UPI00164AFBC1	362.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1406026_6	1408437.JNJN01000032_gene2312	354.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-1406026_6	BrxP_00001	64.9	8.8e-20	BrxP	BREX
Pfam	UHGV-1406026_6	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1406026_6	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1406026_6	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1406026_7	phrog_799	45.2	0.00000000000096	DNA methyltransferase	other
UniRef90	UHGV-1406026_7	UniRef90_A0A4U8T4F4	101.0	9.99e-24	Sugar-phosphate nucleotidyltransferase	N/A
eggNOG-mapper	UHGV-1406026_7	537971.HCCG_00428	96.3	8.52e-23	N/A	N/A
structural_annotation	UHGV-1406026_7	PF05869,MF_00607,NF000468,COG0030	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1406026_8	1232449.BAHV02000016_gene1829	117.0	4.57e-32	N/A	N/A
PHROG	UHGV-1406026_12	phrog_7314	46.9	0.00000000000056	N/A	unknown function
UniRef90	UHGV-1406026_13	UniRef90_A0A847E3M6	49.7	0.000000559	Ribbon-helix-helix protein, CopG family	N/A
Pfam	UHGV-1406026_13	PF08681	N/A	N/A	N/A	DUF1778
structural_annotation	UHGV-1406026_13	PF03869,NF010256,COG4877	N/A	N/A	N/A	N/A
PHROG	UHGV-1406026_15	phrog_3584	160.2	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1406026_15	1226322.HMPREF1545_03841	245.0	0	N/A	N/A
structural_annotation	UHGV-1406026_15	PF01446,NF041486	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1406026_17	742738.HMPREF9460_02503	89.4	2.32e-21	N/A	N/A
structural_annotation	UHGV-1406026_17	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1406026_18	phrog_119	61.9	1e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1406026_18	UniRef90_A0A0D8IV26	84.3	5.52e-20	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1406026_18	1415774.U728_1257	65.1	0.000000000000701	HNH nucleases	N/A
Pfam	UHGV-1406026_18	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1406026_18	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1406026_19	phrog_361	73.8	2.4e-21	terminase small subunit	head and packaging
UniRef90	UHGV-1406026_19	UniRef90_UPI0004135207	60.5	0.00000000259	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-1406026_19	1033744.CAEL01000029_gene1286	70.1	0.0000000000000759	Phage terminase, small subunit	N/A
Pfam	UHGV-1406026_19	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-1406026_19	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1406026_20	phrog_9	288.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-1406026_20	UniRef90_A0A2V2GQ67	956.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1406026_20	1226322.HMPREF1545_00113	849.0	0	Phage Terminase	N/A
Pfam	UHGV-1406026_20	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1406026_20	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1406026_20	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1406026_20	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1406026_21	phrog_12	170.9	0	portal protein	head and packaging
UniRef90	UHGV-1406026_21	UniRef90_A0A0D8IVL0	528.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1406026_21	1226322.HMPREF1545_00114	452.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-1406026_21	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1406026_21	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1406026_21	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1406026_21	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1406026_22	K06904	149.8	2.24208e-44	N/A	N/A
PHROG	UHGV-1406026_22	phrog_80	175.7	0	head maturation protease	head and packaging
UniRef90	UHGV-1406026_22	UniRef90_U2SBX0	234.0	0	Phage prohead protease, HK97 family	N/A
eggNOG-mapper	UHGV-1406026_22	1226322.HMPREF1545_00115	234.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-1406026_22	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1406026_22	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1406026_22	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1406026_22	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1406026_23	phrog_10	198.0	0	major head protein	head and packaging
UniRef90	UHGV-1406026_23	UniRef90_A0A1C6H720	644.0	0	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
eggNOG-mapper	UHGV-1406026_23	1226322.HMPREF1545_00116	593.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1406026_23	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1406026_23	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1406026_23	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1406026_23	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1406026_24	phrog_2550	70.9	1.1e-20	N/A	unknown function
UniRef90	UHGV-1406026_24	UniRef90_UPI0008717716	92.0	2.07e-22	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1406026_24	1226322.HMPREF1545_00117	81.6	4.51e-19	N/A	N/A
structural_annotation	UHGV-1406026_24	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1406026_25	phrog_19734	90.0	2.4e-26	N/A	unknown function
UniRef90	UHGV-1406026_25	UniRef90_A0A3E3E563	82.4	5.06e-18	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-1406026_25	1235798.C817_04587	92.0	1.45e-22	N/A	N/A
structural_annotation	UHGV-1406026_25	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1406026_26	1232446.BAIE02000002_gene829	90.9	2.63e-22	N/A	N/A
structural_annotation	UHGV-1406026_26	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-1406026_27	phrog_5	40.4	0.000000000039	tail completion or Neck1 protein	connector
UniRef90	UHGV-1406026_27	UniRef90_A0A1C6FG30	142.0	2.53e-40	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-1406026_27	908340.HMPREF9406_2573	132.0	4.31e-37	N/A	N/A
structural_annotation	UHGV-1406026_27	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1406026_28	phrog_88	81.6	9.1e-24	major tail protein	tail
UniRef90	UHGV-1406026_28	UniRef90_UPI0018771F27	136.0	9.47e-37	phage tail protein	N/A
eggNOG-mapper	UHGV-1406026_28	33035.JPJF01000039_gene278	81.3	3.05e-16	N/A	N/A
structural_annotation	UHGV-1406026_28	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1406026_31	phrog_6900	257.8	0	tail length tape measure protein	tail
UniRef90	UHGV-1406026_31	UniRef90_A0A7X8M4B4	275.0	0	Phage tail protein (Fragment)	N/A
eggNOG-mapper	UHGV-1406026_31	1216932.CM240_0625	310.0	0	tape measure	N/A
COG	UHGV-1406026_31	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1406026_31	COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1406026_32	phrog_33	81.8	1.5e-23	distal tail protein Dit	tail
UniRef90	UHGV-1406026_32	UniRef90_A0A173Z1X4	185.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1406026_32	536233.CLO_0897	80.5	0.00000000000000162	tail component	N/A
Pfam	UHGV-1406026_32	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
COG	UHGV-1406026_32	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1406026_32	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1406026_33	phrog_1067	328.5	0	minor head protein	head and packaging
UniRef90	UHGV-1406026_33	UniRef90_A0A1C6H6B4	480.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1406026_33	1123263.AUKY01000068_gene489	344.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1406026_33	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1406026_33	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1406026_33	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1406026_33	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1406026_36	phrog_16573	44.0	0.0000000000021	N/A	unknown function
eggNOG-mapper	UHGV-1406026_36	1160721.RBI_I01572	77.0	0.000000000000432	N/A	N/A
structural_annotation	UHGV-1406026_37	PF14686,PF07210,PF21582,TIGR03000,TIGR04183,COG2512	N/A	N/A	N/A	N/A
PHROG	UHGV-1406026_40	phrog_27545	86.7	2.9e-25	N/A	unknown function
eggNOG-mapper	UHGV-1406026_40	1122971.BAME01000151_gene6566	100.0	2.36e-24	N/A	N/A
PHROG	UHGV-1406026_41	phrog_14030	165.2	0	N/A	unknown function
UniRef90	UHGV-1406026_41	UniRef90_A0A316NTC6	217.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1406026_41	1121115.AXVN01000051_gene809	180.0	0	NLP P60 protein	N/A
Pfam	UHGV-1406026_41	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
Pfam	UHGV-1406026_41	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1406026_41	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1406026_41	PF01471,PF05382,NF038080,NF033742,COG3409,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-1406026_42	phrog_199	65.5	6.1e-19	holin	lysis
UniRef90	UHGV-1406026_42	UniRef90_R5AT18	181.0	0	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-1406026_42	1121344.JHZO01000003_gene684	145.0	2.18042e-42	toxin secretion phage lysis holin	N/A
Pfam	UHGV-1406026_42	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1406026_42	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1406026_42	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1406026_42	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-1406026_43	K07273	194.5	0	acm; lysozyme	N/A
PHROG	UHGV-1406026_43	phrog_291	118.9	4.4e-35	endolysin	lysis
UniRef90	UHGV-1406026_43	UniRef90_A0A316NNJ5	589.0	0	Lyzozyme M1 (1,4-beta-N-acetylmuramidase)	N/A
eggNOG-mapper	UHGV-1406026_43	552398.HMPREF0866_01858	227.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1406026_43	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1406026_43	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A