UHGV-1406624 (vOTU-135286)

Viral Genome: UHGV-1406624

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1406624
vOTU ID	vOTU-135286
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0188958
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	59.93 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	11
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9826
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	30.6
Jumbo phage	No

Genome content
Genome length (bp)	26,077
GC content	45.98%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	39
CDS density	93%
Average CDS length (bps)	624.92
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 59.93)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1406624_1	411902.CLOBOL_00122	110.0	2.25e-29	N/A	N/A
PHROG	UHGV-1406624_2	phrog_18725	63.0	5.4e-18	N/A	unknown function
eggNOG-mapper	UHGV-1406624_2	411902.CLOBOL_00123	123.0	4.84e-34	N/A	N/A
PHROG	UHGV-1406624_3	phrog_32744	167.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1406624_3	411902.CLOBOL_00124	454.0	0	N/A	N/A
structural_annotation	UHGV-1406624_3	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-1406624_4	phrog_1194	63.3	3.3e-18	N/A	unknown function
eggNOG-mapper	UHGV-1406624_4	411902.CLOBOL_00125	129.0	5.86e-37	N/A	N/A
structural_annotation	UHGV-1406624_4	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1406624_5	phrog_37543	718.8	0	N/A	unknown function
UniRef90	UHGV-1406624_5	UniRef90_A0A1C6CG40	278.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1406624_5	411459.RUMOBE_01384	225.0	0	phage tail tape measure protein	N/A
COG	UHGV-1406624_5	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1406624_5	PF11177,PF09486,TIGR02559,COG3237,COG1842	N/A	N/A	N/A	N/A
PHROG	UHGV-1406624_6	phrog_706	138.7	3.20001e-41	N/A	unknown function
UniRef90	UHGV-1406624_6	UniRef90_A0A1I0K8S4	202.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1406624_6	33035.JPJF01000106_gene3124	181.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1406624_6	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1406624_6	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1406624_7	phrog_11299	98.9	4.1e-29	N/A	unknown function
eggNOG-mapper	UHGV-1406624_7	411459.RUMOBE_01382	101.0	1.35e-25	N/A	N/A
structural_annotation	UHGV-1406624_7	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1406624_8	phrog_3099	103.3	2.3e-30	N/A	unknown function
eggNOG-mapper	UHGV-1406624_8	476272.RUMHYD_01782	163.0	0	N/A	N/A
PHROG	UHGV-1406624_9	phrog_3266	93.1	2.2e-27	tail completion	connector
eggNOG-mapper	UHGV-1406624_9	476272.RUMHYD_01781	139.0	7.66999e-40	N/A	N/A
structural_annotation	UHGV-1406624_9	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1406624_10	phrog_556	71.5	3.5e-21	minor head protein	head and packaging
UniRef90	UHGV-1406624_10	UniRef90_UPI0008B4CFF0	202.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1406624_10	476272.RUMHYD_01780	173.0	0	N/A	N/A
Pfam	UHGV-1406624_10	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1406624_10	PF11114	N/A	N/A	N/A	N/A
COG	UHGV-1406624_11	COG4227	N/A	N/A	Antirestriction protein ArdC	N/A
PHROG	UHGV-1406624_12	phrog_3366	88.2	8.8e-26	N/A	unknown function
eggNOG-mapper	UHGV-1406624_12	476272.RUMHYD_01779	153.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-1406624_12	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1406624_13	phrog_8680	233.7	0	N/A	unknown function
UniRef90	UHGV-1406624_13	UniRef90_UPI001C0F342A	282.0	0	N/A	N/A
eggNOG-mapper	UHGV-1406624_13	411470.RUMGNA_02208	254.0	0	N/A	N/A
Pfam	UHGV-1406624_13	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-1406624_13	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-1406624_14	phrog_18218	141.6	1.80067e-42	N/A	unknown function
UniRef90	UHGV-1406624_14	UniRef90_A0A8D9PGR5	154.0	0	Holin	N/A
eggNOG-mapper	UHGV-1406624_14	411902.CLOBOL_03424	80.9	2.53e-18	N/A	N/A
structural_annotation	UHGV-1406624_14	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1406624_15	phrog_419	82.0	9.7e-24	N/A	unknown function
eggNOG-mapper	UHGV-1406624_15	476272.RUMHYD_03324	81.6	9.35e-20	N/A	N/A
structural_annotation	UHGV-1406624_15	PF14083	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1406624_16	1158601.I585_00711	48.9	0.000000878	N/A	N/A
PHROG	UHGV-1406624_17	phrog_541	96.3	2.2e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-1406624_17	476272.RUMHYD_01778	128.0	1.63e-35	N/A	N/A
PHROG	UHGV-1406624_18	phrog_544	156.8	0	major head protein	head and packaging
UniRef90	UHGV-1406624_18	UniRef90_A0A395X7A1	598.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1406624_18	1232453.BAIF02000011_gene3359	380.0	0	N/A	N/A
Pfam	UHGV-1406624_18	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-1406624_18	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1406624_19	phrog_194	67.6	2.4e-19	head scaffolding protein	head and packaging
UniRef90	UHGV-1406624_19	UniRef90_UPI001D14C9C8	192.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1406624_19	476272.RUMHYD_01775	182.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-1406624_19	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1406624_19	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1406624_20	phrog_28802	228.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1406624_20	476272.RUMHYD_01772	201.0	0	N/A	N/A
PHROG	UHGV-1406624_21	phrog_20016	191.8	0	N/A	unknown function
UniRef90	UHGV-1406624_21	UniRef90_A0A285PT46	154.0	1.4013e-45	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1406624_21	397290.C810_05214	170.0	0	N/A	N/A
structural_annotation	UHGV-1406624_21	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1406624_22	phrog_16490	179.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1406624_22	397290.C810_01328	176.0	0	N/A	N/A
PHROG	UHGV-1406624_23	phrog_22984	91.3	5.7e-27	N/A	unknown function
PHROG	UHGV-1406624_24	phrog_21718	131.7	3.6e-39	N/A	unknown function
eggNOG-mapper	UHGV-1406624_24	397290.C810_05210	130.0	3.3e-36	N/A	N/A
AcrCatalog	UHGV-1406624_25	cluster_37488	71.2	2.27e-19	NA	N/A
KOfam	UHGV-1406624_27	K07726	40.7	0.000000000037	K07726; putative transcriptional regulator	N/A
PHROG	UHGV-1406624_27	phrog_2104	43.7	0.0000000000043	N/A	unknown function
UniRef90	UHGV-1406624_27	UniRef90_A0A1C5PJW7	85.1	8.92e-21	Putative zinc finger/helix-turn-helix protein, YgiT family	N/A
eggNOG-mapper	UHGV-1406624_27	888727.HMPREF9092_0491	68.6	0.00000000000000616	Helix-turn-helix	N/A
Pfam	UHGV-1406624_27	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1406624_27	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-1406624_27	PF01381,NF040522,COG2944	N/A	N/A	N/A	N/A
UniRef90	UHGV-1406624_28	UniRef90_A0A395X7A4	179.0	0	CTP synthase	N/A
eggNOG-mapper	UHGV-1406624_28	476272.RUMHYD_01766	120.0	3.06e-34	N/A	N/A
PHROG	UHGV-1406624_29	phrog_3754	108.3	5.7e-32	N/A	unknown function
eggNOG-mapper	UHGV-1406624_29	476272.RUMHYD_01764	184.0	0	N/A	N/A
PHROG	UHGV-1406624_30	phrog_581	261.6	0	minor head protein	head and packaging
UniRef90	UHGV-1406624_30	UniRef90_A0A1C6CDG2	587.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-1406624_30	33035.JPJF01000106_gene3134	441.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1406624_30	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1406624_30	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1406624_30	PF06152	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1406624_33	476272.RUMHYD_00002	99.0	4.05e-19	N/A	N/A
PHROG	UHGV-1406624_34	phrog_14030	160.5	0	N/A	unknown function
UniRef90	UHGV-1406624_34	UniRef90_UPI001F3A7341	288.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1406624_34	411468.CLOSCI_01513	233.0	0	N/A	N/A
Pfam	UHGV-1406624_34	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
structural_annotation	UHGV-1406624_34	PF19127	N/A	N/A	N/A	N/A
PHROG	UHGV-1406624_35	phrog_533	284.1	0	portal protein	head and packaging
UniRef90	UHGV-1406624_35	UniRef90_A0A1C6CDM8	691.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-1406624_35	33035.JPJF01000106_gene3135	503.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-1406624_35	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1406624_36	K06909	422.3	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1406624_36	phrog_3717	169.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-1406624_36	UniRef90_A0A1C6CDG5	851.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-1406624_36	33035.JPJF01000106_gene3136	721.0	0	Terminase small subunit	N/A
Pfam	UHGV-1406624_36	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
Pfam	UHGV-1406624_36	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1406624_36	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1406624_36	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1406624_36	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1406624_36	PF04466,PF17288,PF03592,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1406624_37	phrog_33130	94.3	5.8e-28	N/A	unknown function
UniRef90	UHGV-1406624_37	UniRef90_A0A3B9CD52	75.9	2.83e-16	S1-like domain-containing protein	N/A
structural_annotation	UHGV-1406624_37	PF10922,MF_00839	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1406624_38	1415774.U728_858	124.0	4.67e-35	N/A	N/A
UniRef90	UHGV-1406624_39	UniRef90_UPI00067F0C72	79.7	1.11e-16	N/A	N/A