UHGV-1407569 (vOTU-169799)

Viral Genome: UHGV-1407569

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1407569
vOTU ID	vOTU-169799
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0202413
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	69.26 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9793
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	40.54
Jumbo phage	No

Genome content
Genome length (bp)	28,405
GC content	31.21%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	39
CDS density	95%
Average CDS length (bps)	694.00
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 69.26)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1407569_1	K14440	54.4	9.3e-16	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-1407569_1	phrog_62	97.5	1.1e-28	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1407569_1	UniRef90_R5BLI6	281.0	0	Helicase C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1407569_1	386043.lwe1326	175.0	0	SNF2 family N-terminal domain	N/A
Pfam	UHGV-1407569_1	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
COG	UHGV-1407569_1	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
PHROG	UHGV-1407569_2	phrog_27058	139.9	9.19952e-42	N/A	unknown function
structural_annotation	UHGV-1407569_2	PF20874	N/A	N/A	N/A	N/A
PHROG	UHGV-1407569_4	phrog_12732	101.0	7.9e-30	N/A	unknown function
UniRef90	UHGV-1407569_4	UniRef90_O03943	58.9	0.0000000352	Rorf148 protein	N/A
AcrCatalog	UHGV-1407569_4	cluster_25206	75.5	5.88e-20	NA	N/A
PHROG	UHGV-1407569_5	phrog_1309	249.3	0	endolysin	lysis
UniRef90	UHGV-1407569_5	UniRef90_A0A133ZZY6	475.0	0	CHAP domain protein	N/A
eggNOG-mapper	UHGV-1407569_5	1321820.HMPREF1983_00914	370.0	0	CHAP domain	N/A
Pfam	UHGV-1407569_5	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-1407569_5	PF08460	N/A	N/A	Bacterial SH3 domain	SH3_5
COG	UHGV-1407569_5	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
structural_annotation	UHGV-1407569_5	PF08460,PF05382,TIGR02219,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-1407569_6	phrog_1129	45.1	0.00000000000062	holin	lysis
Pfam	UHGV-1407569_6	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
PHROG	UHGV-1407569_7	phrog_32123	71.9	1.5e-30	N/A	unknown function
UniRef90	UHGV-1407569_7	UniRef90_UPI001BD93596	65.9	0.0000000827	collagen-like protein	N/A
eggNOG-mapper	UHGV-1407569_7	1005705.HMPREF9967_1058	95.1	5.7e-18	domain, Protein	N/A
COG	UHGV-1407569_7	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
PHROG	UHGV-1407569_8	phrog_199	64.6	1.2e-18	holin	lysis
UniRef90	UHGV-1407569_8	UniRef90_UPI00195EE93F	213.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-1407569_8	562981.HMPREF0428_01805	208.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1407569_8	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1407569_8	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-1407569_8	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
UniRef90	UHGV-1407569_9	UniRef90_A0A133ZZX2	107.0	5.76e-28	30S ribosomal protein S16 domain protein	N/A
UniRef90	UHGV-1407569_10	UniRef90_UPI000CF98EC1	67.0	0.000000000873	sugar-binding protein	N/A
eggNOG-mapper	UHGV-1407569_10	525255.HMPREF0077_0366	64.7	0.000000000978	N/A	N/A
Pfam	UHGV-1407569_10	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-1407569_10	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1407569_12	phrog_1330	280.2	0	tail protein	tail
UniRef90	UHGV-1407569_12	UniRef90_A0A133ZZW7	1608.0	0	Phage minor structural protein	N/A
eggNOG-mapper	UHGV-1407569_12	562981.HMPREF0428_00970	1068.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1407569_12	PF18994	N/A	N/A	Prophage endopeptidase tail N-terminal domain	Prophage_tailD1
NCBIFam	UHGV-1407569_12	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1407569_12	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-1407569_13	phrog_33	78.7	1.1e-22	distal tail protein Dit	tail
UniRef90	UHGV-1407569_13	UniRef90_A0A133ZZV2	467.0	0	Phage tail component protein	N/A
eggNOG-mapper	UHGV-1407569_13	592010.GCWU000182_001495	159.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-1407569_13	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-1407569_14	K20478	51.3	0.0000000000000019	GOLGB1; golgin subfamily B member 1	N/A
PHROG	UHGV-1407569_14	phrog_13339	410.5	0	tail length tape measure protein	tail
UniRef90	UHGV-1407569_14	UniRef90_A0A133ZZY0	2141.0	0	Phage tail tape measure protein, TP901 family	N/A
eggNOG-mapper	UHGV-1407569_14	1225805.J7KGW1_9CAUD	311.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-1407569_14	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1407569_14	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
structural_annotation	UHGV-1407569_14	PF10145,PF05384,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1407569_16	phrog_16464	74.6	1.3e-21	N/A	unknown function
PHROG	UHGV-1407569_17	phrog_88	63.3	4e-18	major tail protein	tail
UniRef90	UHGV-1407569_17	UniRef90_A0A133ZZV4	428.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1407569_17	1408438.JADD01000021_gene415	132.0	8.26e-36	N/A	N/A
structural_annotation	UHGV-1407569_17	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
UniRef90	UHGV-1407569_18	UniRef90_A0A133ZZW8	267.0	0	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-1407569_18	592010.GCWU000182_001490	91.7	1.15e-21	N/A	N/A
structural_annotation	UHGV-1407569_18	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1407569_19	phrog_15828	65.9	5.6e-19	N/A	unknown function
structural_annotation	UHGV-1407569_19	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-1407569_20	phrog_4014	66.4	6.3e-19	head-tail adaptor	connector
UniRef90	UHGV-1407569_20	UniRef90_A0A133ZZW5	179.0	0	Putative phage head-tail adaptor	N/A
eggNOG-mapper	UHGV-1407569_20	1408438.JADD01000021_gene412	62.0	0.0000000000918	N/A	N/A
structural_annotation	UHGV-1407569_20	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1407569_21	phrog_933	62.1	7.6e-18	N/A	unknown function
PHROG	UHGV-1407569_22	phrog_749	99.4	1.8e-29	N/A	unknown function
UniRef90	UHGV-1407569_22	UniRef90_UPI001BE74BBD	101.0	3.94e-26	phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-1407569_22	240302.BN982_00187	102.0	4.27e-27	N/A	N/A
structural_annotation	UHGV-1407569_22	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1407569_23	phrog_10	186.7	0	major head protein	head and packaging
UniRef90	UHGV-1407569_23	UniRef90_UPI00080769BA	510.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1407569_23	279010.BL03504	253.0	0	capsid protein	N/A
Pfam	UHGV-1407569_23	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1407569_23	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1407569_23	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1407569_23	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1407569_24	K01358	155.6	0	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1407569_24	phrog_94	267.2	0	head maturation protease	head and packaging
UniRef90	UHGV-1407569_24	UniRef90_UPI001EFA2044	386.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-1407569_24	1274524.BSONL12_06128	219.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1407569_24	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1407569_24	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1407569_24	PF00574,MF_00444,NF009203,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1407569_25	phrog_12	280.2	0	portal protein	head and packaging
UniRef90	UHGV-1407569_25	UniRef90_UPI0008076276	741.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1407569_25	1274524.BSONL12_06123	326.0	0	Phage portal protein	N/A
Pfam	UHGV-1407569_25	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1407569_25	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1407569_25	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1407569_25	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1407569_27	phrog_9	440.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-1407569_27	UniRef90_A0A0B3BPT0	663.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1407569_27	1234664.AMRO01000024_gene1804	672.0	0	Phage Terminase	N/A
Pfam	UHGV-1407569_27	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1407569_27	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1407569_27	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1407569_27	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1407569_28	phrog_83	129.8	1.1e-38	terminase small subunit	head and packaging
UniRef90	UHGV-1407569_28	UniRef90_UPI0008076EF3	268.0	0	phage terminase small subunit P27 family	N/A
eggNOG-mapper	UHGV-1407569_28	1382315.JPOI01000001_gene285	137.0	1.42e-38	Phage terminase, small subunit	N/A
Pfam	UHGV-1407569_28	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
NCBIFam	UHGV-1407569_28	TIGR01558.1	N/A	N/A	phage terminase small subunit P27 family	N/A
COG	UHGV-1407569_28	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1407569_28	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1407569_29	PF08281,TIGR01636,COG2739	N/A	N/A	N/A	N/A
UniRef90	UHGV-1407569_33	UniRef90_UPI001A470AE5	161.0	0	med21 domain-containing protein	N/A
eggNOG-mapper	UHGV-1407569_33	562981.HMPREF0428_01830	146.0	1.86933e-42	N/A	N/A
UniRef90	UHGV-1407569_36	UniRef90_UPI000403EAB4	65.5	0.00000000000353	N/A	N/A
PHROG	UHGV-1407569_38	phrog_98	61.1	1.8e-17	N/A	unknown function
UniRef90	UHGV-1407569_38	UniRef90_A0A6H1EY67	92.8	1.03e-21	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-1407569_38	562981.HMPREF0428_00992	85.1	1.03e-19	YopX protein	N/A
Pfam	UHGV-1407569_38	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-1407569_38	PF09643,TIGR01671	N/A	N/A	N/A	N/A