UHGV-1408074 (vOTU-152005)

Viral Genome: UHGV-1408074

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1408074
vOTU ID	vOTU-152005
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0184097
Associated BioSample	SAMN06350170
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	65.35 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9731
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	21.57
Jumbo phage	No

Genome content
Genome length (bp)	25,299
GC content	34.68%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	30
CDS density	89%
Average CDS length (bps)	749.30
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 65.35)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1408074_1	phrog_2131	142.1	1.90016e-42	N/A	unknown function
UniRef90	UHGV-1408074_1	UniRef90_O34053	137.0	4.2e-39	ORF22	N/A
eggNOG-mapper	UHGV-1408074_1	85154.O34053_BPO12	137.0	7.05e-40	N/A	N/A
PHROG	UHGV-1408074_4	phrog_3882	46.1	0.0000000000006	N/A	unknown function
PHROG	UHGV-1408074_5	phrog_9904	126.3	8.1e-38	N/A	unknown function
UniRef90	UHGV-1408074_5	UniRef90_A0A132P4F8	110.0	7.29e-31	Thymidylate synthase	N/A
KOfam	UHGV-1408074_6	K07451	55.7	9.9e-16	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-1408074_6	phrog_119	96.5	3e-28	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1408074_6	UniRef90_A0A133CKZ7	238.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1408074_6	565664.EFXG_01782	238.0	0	HNH endonuclease	N/A
Pfam	UHGV-1408074_6	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1408074_6	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1408074_7	phrog_5942	126.9	5.3e-38	N/A	unknown function
eggNOG-mapper	UHGV-1408074_7	565664.EFXG_01781	189.0	0	N/A	N/A
PHROG	UHGV-1408074_8	phrog_5110	123.4	7.6e-37	terminase small subunit	head and packaging
UniRef90	UHGV-1408074_8	UniRef90_A0A132P4G0	197.0	0	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-1408074_8	565664.EFXG_01780	197.0	0	N/A	N/A
Pfam	UHGV-1408074_8	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
PHROG	UHGV-1408074_9	phrog_9	288.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-1408074_9	UniRef90_A0A132ZDE4	1139.0	0	Phage Terminase	N/A
eggNOG-mapper	UHGV-1408074_9	565664.EFXG_01779	1139.0	0	Phage Terminase	N/A
Pfam	UHGV-1408074_9	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1408074_9	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1408074_9	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1408074_9	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1408074_10	phrog_12	134.3	7.69999e-40	portal protein	head and packaging
UniRef90	UHGV-1408074_10	UniRef90_I6T7N2	747.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-1408074_10	768486.EHR_09565	747.0	0	Phage portal protein	N/A
Pfam	UHGV-1408074_10	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1408074_10	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1408074_10	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1408074_10	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1408074_11	K01358	128.4	7.8e-38	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1408074_11	phrog_94	217.8	0	head maturation protease	head and packaging
UniRef90	UHGV-1408074_11	UniRef90_A0A132P4D5	428.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-1408074_11	768486.EHR_09570	423.0	0	Clp protease	N/A
Pfam	UHGV-1408074_11	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1408074_11	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1408074_11	PF00574,MF_00444,NF009203,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1408074_12	phrog_10	165.1	0	major head protein	head and packaging
UniRef90	UHGV-1408074_12	UniRef90_I6SDV1	706.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1408074_12	565664.EFXG_01776	717.0	0	Phage capsid family	N/A
Pfam	UHGV-1408074_12	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1408074_12	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1408074_12	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1408074_12	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1408074_13	phrog_4417	501.2	0	N/A	unknown function
UniRef90	UHGV-1408074_13	UniRef90_A0A0R1JPC3	414.0	0	Conserved bacteriophage protein	N/A
eggNOG-mapper	UHGV-1408074_13	565664.EFXG_01775	612.0	0	N/A	N/A
structural_annotation	UHGV-1408074_13	PF03414,NF041524,COG1442	N/A	N/A	N/A	N/A
PHROG	UHGV-1408074_14	phrog_749	97.6	7.2e-29	N/A	unknown function
UniRef90	UHGV-1408074_14	UniRef90_I6S2A8	205.0	0	Gp6 protein	N/A
eggNOG-mapper	UHGV-1408074_14	768486.EHR_09585	205.0	0	N/A	N/A
PHROG	UHGV-1408074_15	phrog_5635	167.5	0	head-tail adaptor	connector
UniRef90	UHGV-1408074_15	UniRef90_A0A133CKL1	233.0	0	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-1408074_15	565664.EFXG_01773	233.0	0	N/A	N/A
NCBIFam	UHGV-1408074_15	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-1408074_15	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1408074_16	phrog_5910	188.2	0	N/A	unknown function
UniRef90	UHGV-1408074_16	UniRef90_I6SZA1	256.0	0	Gp8 protein	N/A
eggNOG-mapper	UHGV-1408074_16	565664.EFXG_01772	259.0	0	N/A	N/A
PHROG	UHGV-1408074_17	phrog_5509	179.2	0	neck protein	connector
UniRef90	UHGV-1408074_17	UniRef90_I6SDV7	266.0	0	Gp9 protein	N/A
eggNOG-mapper	UHGV-1408074_17	768486.EHR_09600	266.0	0	N/A	N/A
structural_annotation	UHGV-1408074_17	TIGR01725,COG5005	N/A	N/A	N/A	N/A
UniRef90	UHGV-1408074_18	UniRef90_A0A828ZRA6	355.0	0	Phage major tail protein B	N/A
eggNOG-mapper	UHGV-1408074_18	768486.EHR_09605	376.0	0	N/A	N/A
structural_annotation	UHGV-1408074_18	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1408074_19	phrog_5802	134.5	3.20001e-40	N/A	unknown function
eggNOG-mapper	UHGV-1408074_19	565664.EFXG_01769	234.0	0	N/A	N/A
PHROG	UHGV-1408074_20	phrog_58	339.2	0	tail length tape measure protein	tail
UniRef90	UHGV-1408074_20	UniRef90_I6SZA5	1105.0	0	N/A	N/A
eggNOG-mapper	UHGV-1408074_20	768486.EHR_09620	1105.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-1408074_20	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1408074_20	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1408074_20	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-1408074_20	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1408074_21	phrog_33	65.0	1.8e-18	distal tail protein Dit	tail
UniRef90	UHGV-1408074_21	UniRef90_I6SDW0	482.0	0	Gp13 protein	N/A
eggNOG-mapper	UHGV-1408074_21	565664.EFXG_01766	490.0	0	phage tail	N/A
COG	UHGV-1408074_21	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1408074_21	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1408074_22	phrog_1067	447.7	0	minor head protein	head and packaging
UniRef90	UHGV-1408074_22	UniRef90_A0A1L8WAB1	1370.0	0	Phage minor structural protein	N/A
eggNOG-mapper	UHGV-1408074_22	565664.EFXG_01765	1028.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-1408074_22	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1408074_22	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1408074_22	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1408074_22	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1408074_23	phrog_9884	870.7	0	N/A	unknown function
UniRef90	UHGV-1408074_23	UniRef90_A0A829AB09	1135.0	0	BppU_N domain-containing protein	N/A
eggNOG-mapper	UHGV-1408074_23	768486.EHR_09635	697.0	0	N/A	N/A
Pfam	UHGV-1408074_23	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
PHROG	UHGV-1408074_24	phrog_2429	70.3	2.1e-20	involved in bacteriocin production or immunity	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1408074_24	UniRef90_UPI0003A7F9DF	114.0	3.71e-32	BhlA/UviB family holin-like peptide	N/A
eggNOG-mapper	UHGV-1408074_24	1140001.I571_01173	125.0	4.72e-37	BhlA holin family	N/A
Pfam	UHGV-1408074_24	PF10960	N/A	N/A	BhlA holin family	Holin_BhlA
PHROG	UHGV-1408074_25	phrog_1299	70.3	1.8e-20	holin	lysis
UniRef90	UHGV-1408074_25	UniRef90_A0A2A7SQV0	152.0	0	Phage holin	N/A
eggNOG-mapper	UHGV-1408074_25	1140001.I571_01174	152.0	0	Bacteriophage A118-like holin, Hol118	N/A
Pfam	UHGV-1408074_25	PF06946	N/A	N/A	Bacteriophage A118-like holin, Hol118	Phage_holin_5_1
KOfam	UHGV-1408074_26	K01447	76.9	3.6e-22	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1408074_26	phrog_2338	279.8	0	endolysin	lysis
UniRef90	UHGV-1408074_26	UniRef90_A0A132Z9P7	681.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1408074_26	565664.EFXG_04102	681.0	0	Ami_2	N/A
Pfam	UHGV-1408074_26	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1408074_26	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1408074_26	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-1408074_27	phrog_14664	94.9	9e-28	N/A	unknown function
eggNOG-mapper	UHGV-1408074_27	1140001.I571_01176	356.0	0	N/A	N/A
structural_annotation	UHGV-1408074_27	PF00644,COG5654	N/A	N/A	N/A	N/A
KOfam	UHGV-1408074_29	K03071	47.9	0.00000000000023	secB; preprotein translocase subunit SecB	N/A
PHROG	UHGV-1408074_29	phrog_21664	100.3	1.9e-29	N/A	unknown function
UniRef90	UHGV-1408074_29	UniRef90_UPI0001B6FE1E	249.0	0	protein-export chaperone SecB	N/A
eggNOG-mapper	UHGV-1408074_29	1140001.I571_01178	275.0	0	Preprotein translocase subunit SecB	N/A
Pfam	UHGV-1408074_29	PF02556	N/A	N/A	Preprotein translocase subunit SecB	SecB
structural_annotation	UHGV-1408074_29	PF02556,MF_00821,NF004394,COG1952	N/A	N/A	N/A	N/A
PHROG	UHGV-1408074_30	phrog_16386	113.7	8e-34	N/A	unknown function
UniRef90	UHGV-1408074_30	UniRef90_UPI000349AAD3	132.0	3.63e-39	N/A	N/A
eggNOG-mapper	UHGV-1408074_30	1104325.M7W_1376	135.0	1.09e-40	N/A	N/A
Pfam	UHGV-1408074_30	PF19385	N/A	N/A	N/A	DUF5960