UHGV-1408695 (vOTU-035650)

Viral Genome: UHGV-1408695

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1408695
vOTU ID	vOTU-035650
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0254131
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	87.99 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9825
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	26.08
Jumbo phage	No

Genome content
Genome length (bp)	37,443
GC content	52.30%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	70
CDS density	94%
Average CDS length (bps)	500.44
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 87.99)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-1408695_2	PF05082	N/A	N/A	N/A	N/A
KOfam	UHGV-1408695_6	K00558	137.0	7.84727e-44	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1408695_6	phrog_363	235.1	0	DNA methyltransferase	other
UniRef90	UHGV-1408695_6	UniRef90_UPI00082E0CBC	357.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1408695_6	742738.HMPREF9460_04053	283.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1408695_6	MTase_II_00058	114.9	2e-34	Type II methyltransferase	RM
Pfam	UHGV-1408695_6	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1408695_6	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1408695_6	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1408695_6	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
Pfam	UHGV-1408695_7	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1408695_7	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-1408695_8	phrog_38832	60.8	1.3e-17	N/A	unknown function
eggNOG-mapper	UHGV-1408695_8	1232443.BAIA02000078_gene48	122.0	2.28e-34	N/A	N/A
PHROG	UHGV-1408695_12	phrog_22543	40.2	0.000000000049	N/A	unknown function
UniRef90	UHGV-1408695_12	UniRef90_A0A8D9PDT5	55.1	0.000000159	Hydrogenase/urease nickel incorporation protein	N/A
structural_annotation	UHGV-1408695_14	PF04606,NF007241	N/A	N/A	N/A	N/A
PHROG	UHGV-1408695_15	phrog_801	65.8	9.2e-19	endolysin; inhibits RNA polymerase	lysis
UniRef90	UHGV-1408695_15	UniRef90_UPI000B35015B	99.8	5.34e-25	N/A	N/A
eggNOG-mapper	UHGV-1408695_15	1366055.S5MLS6_9CAUD	63.5	0.0000000000802	Cytidine and deoxycytidylate deaminase zinc-binding region	N/A
Pfam	UHGV-1408695_15	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-1408695_15	PF18909	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1408695_16	742738.HMPREF9460_02503	95.9	1.97e-24	N/A	N/A
structural_annotation	UHGV-1408695_16	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-1408695_17	K03497	56.2	3.9e-16	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1408695_17	phrog_21498	291.8	0	N/A	unknown function
UniRef90	UHGV-1408695_17	UniRef90_A0A7X2P836	288.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-1408695_17	469378.Ccur_02830	282.0	0	DNA binding	N/A
PADLOC	UHGV-1408695_17	MTase_II_00015	86.6	3.6e-25	Type II methyltransferase	RM
Pfam	UHGV-1408695_17	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-1408695_17	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1408695_17	PF02195,PF05869,MF_02015,TIGR00180,TIGR01712,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-1408695_19	K06909	380.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1408695_19	phrog_3717	162.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-1408695_19	UniRef90_A0A2U1BEH4	717.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1408695_19	1123511.KB905868_gene187	469.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1408695_19	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1408695_19	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1408695_19	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1408695_19	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1408695_19	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1408695_20	phrog_533	354.9	0	portal protein	head and packaging
UniRef90	UHGV-1408695_20	UniRef90_UPI0006C81717	691.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1408695_20	1226322.HMPREF1545_00044	601.0	0	N/A	N/A
Pfam	UHGV-1408695_20	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1408695_20	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1408695_21	phrog_581	297.0	0	minor head protein	head and packaging
UniRef90	UHGV-1408695_21	UniRef90_A0A1C5N7V1	484.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-1408695_21	1226322.HMPREF1545_00046	370.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1408695_21	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1408695_21	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1408695_21	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1408695_22	phrog_29211	40.5	0.000000000035	N/A	unknown function
eggNOG-mapper	UHGV-1408695_24	1232443.BAIA02000078_gene31	92.0	3.38e-21	N/A	N/A
structural_annotation	UHGV-1408695_24	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1408695_25	phrog_10	171.6	0	major head protein	head and packaging
UniRef90	UHGV-1408695_25	UniRef90_A0A2U1BEF2	499.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-1408695_25	1226322.HMPREF1545_00050	471.0	0	Phage capsid family	N/A
Pfam	UHGV-1408695_25	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1408695_25	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1408695_25	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1408695_25	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1408695_26	phrog_541	100.1	1.5e-29	head-tail adaptor	connector
eggNOG-mapper	UHGV-1408695_26	642492.Clole_0822	62.0	0.000000000245	N/A	N/A
PHROG	UHGV-1408695_27	phrog_3366	98.2	7.1e-29	N/A	unknown function
eggNOG-mapper	UHGV-1408695_27	1226322.HMPREF1545_00053	175.0	0	N/A	N/A
structural_annotation	UHGV-1408695_27	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1408695_28	phrog_556	72.2	6.4e-21	minor head protein	head and packaging
UniRef90	UHGV-1408695_28	UniRef90_UPI00195E1497	208.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1408695_28	1226322.HMPREF1545_00054	168.0	0	Minor capsid protein	N/A
Pfam	UHGV-1408695_28	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1408695_28	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1408695_29	phrog_3266	45.3	0.0000000000011	tail completion	connector
UniRef90	UHGV-1408695_29	UniRef90_A0A2Z4QA01	101.0	4.17e-25	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1408695_29	1232443.BAIA02000078_gene24	171.0	0	N/A	N/A
structural_annotation	UHGV-1408695_29	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1408695_30	phrog_3099	76.3	4.5e-22	N/A	unknown function
eggNOG-mapper	UHGV-1408695_30	693746.OBV_18150	208.0	0	N/A	N/A
structural_annotation	UHGV-1408695_30	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-1408695_31	phrog_11299	65.2	1.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-1408695_31	693746.OBV_18160	159.0	0	N/A	N/A
structural_annotation	UHGV-1408695_31	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1408695_32	phrog_706	128.0	6.5e-38	N/A	unknown function
UniRef90	UHGV-1408695_32	UniRef90_UPI000682A80B	218.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1408695_32	693746.OBV_18170	204.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1408695_32	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1408695_32	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1408695_33	phrog_1535	128.5	0	tail length tape measure protein	tail
UniRef90	UHGV-1408695_33	UniRef90_A0A810PX76	238.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1408695_33	1235797.C816_04182	416.0	0	SLT domain	N/A
COG	UHGV-1408695_33	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1408695_33	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-1408695_34	phrog_1194	77.8	1.2e-22	N/A	unknown function
eggNOG-mapper	UHGV-1408695_34	411902.CLOBOL_00125	116.0	1.11e-31	N/A	N/A
structural_annotation	UHGV-1408695_34	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1408695_35	phrog_13879	239.4	0	N/A	unknown function
eggNOG-mapper	UHGV-1408695_35	1226322.HMPREF1545_00061	358.0	0	N/A	N/A
structural_annotation	UHGV-1408695_35	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-1408695_36	phrog_18725	55.8	3.4e-16	N/A	unknown function
eggNOG-mapper	UHGV-1408695_36	1226322.HMPREF1545_00062	85.1	1.17e-18	N/A	N/A
structural_annotation	UHGV-1408695_37	PF09826,MF_03001,TIGR04528,COG2706	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1408695_38	PF08481,NF033814,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-1408695_41	phrog_10898	278.0	0	N/A	unknown function
UniRef90	UHGV-1408695_41	UniRef90_A0A7U3NJT3	200.0	0	Putative Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1408695_41	717606.PaecuDRAFT_2136	65.1	0.00000000231	S-layer homology domain	N/A
COG	UHGV-1408695_41	COG1520	N/A	N/A	Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat	N/A
structural_annotation	UHGV-1408695_41	PF19081,PF15418,MF_01905,NF032891,COG3291	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1408695_42	PF16408,NF033510	N/A	N/A	N/A	N/A
PHROG	UHGV-1408695_45	phrog_937	51.7	0.000000000000017	hemolysin	other
eggNOG-mapper	UHGV-1408695_45	693746.OBV_19000	60.5	0.00000000013	N/A	N/A
PHROG	UHGV-1408695_47	phrog_13256	61.6	7.7e-18	N/A	unknown function
eggNOG-mapper	UHGV-1408695_47	428125.CLOLEP_01907	77.4	5.49e-18	N/A	N/A
UniRef90	UHGV-1408695_48	UniRef90_A0A358M2Y7	216.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1408695_48	525254.HMPREF0072_1273	209.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
COG	UHGV-1408695_48	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1408695_48	NF033743	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1408695_49	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1408695_52	1235798.C817_04601	81.3	2.04e-16	N/A	N/A
Pfam	UHGV-1408695_52	PF18912	N/A	N/A	Double zinc ribbon domain	DZR_2
structural_annotation	UHGV-1408695_52	TIGR03826	N/A	N/A	N/A	N/A
PHROG	UHGV-1408695_55	phrog_3754	104.8	7.2e-31	N/A	unknown function
eggNOG-mapper	UHGV-1408695_55	476272.RUMHYD_01764	167.0	0	N/A	N/A
PHROG	UHGV-1408695_56	phrog_21718	103.1	2.3e-30	N/A	unknown function
eggNOG-mapper	UHGV-1408695_56	397290.C810_05210	59.7	0.00000000602	N/A	N/A
PHROG	UHGV-1408695_57	phrog_22984	69.1	2.4e-20	N/A	unknown function
PHROG	UHGV-1408695_58	phrog_16490	148.0	6.86636e-44	N/A	unknown function
eggNOG-mapper	UHGV-1408695_58	1408437.JNJN01000043_gene803	122.0	6.82e-31	N/A	N/A
PHROG	UHGV-1408695_59	phrog_20016	186.5	0	N/A	unknown function
UniRef90	UHGV-1408695_59	UniRef90_A0A285PT46	187.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1408695_59	1226322.HMPREF1545_00077	169.0	0	N/A	N/A
structural_annotation	UHGV-1408695_59	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1408695_60	PF12510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1408695_61	1226322.HMPREF1545_00079	112.0	8.48e-31	N/A	N/A
KOfam	UHGV-1408695_62	K14059	159.1	0	int; integrase	N/A
PHROG	UHGV-1408695_62	phrog_1	158.8	0	integrase	integration and excision
UniRef90	UHGV-1408695_62	UniRef90_A0A2Z4QB94	245.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1408695_62	1226322.HMPREF1545_00144	133.0	1.81e-33	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1408695_62	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1408695_62	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1408695_62	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1408695_63	UniRef90_A0A3D3Y4M8	68.2	0.000000000107	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1408695_63	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1408695_63	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1408695_65	phrog_10292	62.9	3.4e-18	N/A	unknown function
UniRef90	UHGV-1408695_65	UniRef90_UPI0009DE3FE8	164.0	0	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1408695_65	665956.HMPREF1032_00562	147.0	4.76441e-44	TM2 domain	N/A
Pfam	UHGV-1408695_65	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-1408695_65	COG2314	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1408695_65	PF05154,PF12773,MF_00788,NF003161	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1408695_66	477974.Daud_0794	72.8	0.000000000000792	PFAM nuclease (SNase	N/A
Pfam	UHGV-1408695_66	PF08139	N/A	N/A	Prokaryotic membrane lipoprotein lipid attachment site	LPAM_1
Pfam	UHGV-1408695_66	PF02805	N/A	N/A	Metal binding domain of Ada	Ada_Zn_binding
COG	UHGV-1408695_66	COG1525	N/A	N/A	Endonuclease YncB, thermonuclease family	N/A
structural_annotation	UHGV-1408695_66	PF02805	N/A	N/A	N/A	N/A
PHROG	UHGV-1408695_68	phrog_8	52.9	0.0000000000000089	transcriptional regulator	transcription regulation
UniRef90	UHGV-1408695_68	UniRef90_A0A847W1V2	69.3	0.0000000000000408	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1408695_68	665950.HMPREF1025_02561	66.2	0.0000000000000905	sequence-specific DNA binding	N/A
Pfam	UHGV-1408695_68	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1408695_68	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1408695_68	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1408695_69	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1408695_70	596152.DesU5LDRAFT_1910	55.8	0.000000106	N/A	N/A