UHGV-1408813 (vOTU-081361)

Viral Genome: UHGV-1408813

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1408813
vOTU ID	vOTU-081361
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0309360
Associated BioSample	SAMEA3541565
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	96.25 (High-quality)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9788
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	22.67
Jumbo phage	No

Genome content
Genome length (bp)	49,677
GC content	46.23%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	82
CDS density	87%
Average CDS length (bps)	525.44
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 96.25)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1408813_1	phrog_270	92.4	7.7e-27	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1408813_1	1423724.BAMM01000020_gene1808	75.1	0.0000000000000775	N/A	N/A
COG	UHGV-1408813_1	COG3756	N/A	N/A	N/A	N/A
KOfam	UHGV-1408813_2	K02315	161.4	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1408813_2	phrog_50	154.4	1.4013e-45	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1408813_2	UniRef90_R6WX70	199.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1408813_2	1321784.HMPREF1987_01633	180.0	0	IstB-like ATP binding protein	N/A
Pfam	UHGV-1408813_2	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
NCBIFam	UHGV-1408813_2	NF005992.0	N/A	N/A	hypothetical protein	N/A
COG	UHGV-1408813_2	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1408813_2	PF01695,MF_01158,NF005992,COG1484	N/A	N/A	N/A	N/A
KOfam	UHGV-1408813_7	K01520	130.6	1.3e-38	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1408813_7	phrog_135	116.0	2.7e-34	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1408813_7	UniRef90_R6ILQ3	145.0	3.84937e-42	Deoxyuridine 5'-triphosphate nucleotidohydrolase	N/A
eggNOG-mapper	UHGV-1408813_7	1282887.AUJG01000016_gene1113	142.0	1.04e-40	N/A	N/A
Pfam	UHGV-1408813_7	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-1408813_7	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-1408813_7	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1408813_7	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1408813_8	1235792.C808_01244	75.1	0.000000000000111	N/A	N/A
structural_annotation	UHGV-1408813_11	PF06289,COG1582	N/A	N/A	N/A	N/A
KOfam	UHGV-1408813_13	K07451	61.8	3.9e-18	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-1408813_13	phrog_1271	67.6	2.6e-19	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1408813_13	UniRef90_U4R634	144.0	3.22004e-41	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-1408813_13	394503.Ccel_3167	146.0	1.91978e-42	N/A	N/A
Pfam	UHGV-1408813_13	PF01844	N/A	N/A	HNH endonuclease	HNH
structural_annotation	UHGV-1408813_13	PF01844,NF008448,COG1403	N/A	N/A	N/A	N/A
UniRef90	UHGV-1408813_18	UniRef90_UPI001C009709	82.4	2.15e-17	N/A	N/A
Pfam	UHGV-1408813_18	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-1408813_22	phrog_4632	49.6	7.7e-16	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1408813_22	UniRef90_A0A1V5ZUM0	96.7	5.17e-23	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-1408813_22	469604.HMPREF0946_01097	68.6	0.000000000000425	N/A	N/A
structural_annotation	UHGV-1408813_22	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1408813_23	phrog_474	97.2	2.8e-28	phosphofructokinase	other
UniRef90	UHGV-1408813_23	UniRef90_UPI00195F5FF7	89.7	3.64e-21	N/A	N/A
eggNOG-mapper	UHGV-1408813_23	1095750.HMPREF9970_1026	81.6	8.59e-19	N/A	N/A
Pfam	UHGV-1408813_23	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-1408813_23	PF19905	N/A	N/A	N/A	N/A
KOfam	UHGV-1408813_25	K03111	122.6	5.3e-36	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1408813_25	phrog_44	118.9	4.6e-35	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1408813_25	UniRef90_A0A7C6GL00	150.0	6.5861e-44	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1408813_25	1232443.BAIA02000073_gene513	116.0	2.24e-31	Single-strand binding protein family	N/A
Pfam	UHGV-1408813_25	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1408813_25	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1408813_25	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1408813_25	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1408813_25	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1408813_27	PF20063,NF033787	N/A	N/A	N/A	N/A
PHROG	UHGV-1408813_28	phrog_4402	157.1	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1408813_28	UniRef90_A0A3A9E5A5	190.0	0	RepB family plasmid replication initiator protein	N/A
eggNOG-mapper	UHGV-1408813_28	1395513.P343_18240	168.0	0	Protein involved in initiation of plasmid replication	N/A
Pfam	UHGV-1408813_28	PF01051	N/A	N/A	Initiator Replication protein, WH1	Rep3_N
Pfam	UHGV-1408813_28	PF21205	N/A	N/A	Initiator Rep protein, WH2	Rep3_C
COG	UHGV-1408813_28	COG5527	N/A	N/A	Protein involved in initiation of plasmid replication	N/A
structural_annotation	UHGV-1408813_28	PF01051,PF21205,NF038290,COG5527	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1408813_29	1378168.N510_03079	95.1	4.61e-21	N/A	N/A
eggNOG-mapper	UHGV-1408813_30	1408437.JNJN01000043_gene802	153.0	0	N/A	N/A
PHROG	UHGV-1408813_31	phrog_16490	71.1	7.7e-38	N/A	unknown function
eggNOG-mapper	UHGV-1408813_31	1408437.JNJN01000043_gene803	102.0	1.22e-23	N/A	N/A
PHROG	UHGV-1408813_33	phrog_374	192.3	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1408813_33	UniRef90_A0A7W0C2S3	162.0	2.24208e-44	Putative transcriptional regulator	N/A
eggNOG-mapper	UHGV-1408813_33	391038.Bphy_1861	150.0	7.81e-41	N/A	N/A
structural_annotation	UHGV-1408813_33	PF17375	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1408813_35	1408437.JNJN01000043_gene805	68.6	0.000000000000431	N/A	N/A
eggNOG-mapper	UHGV-1408813_37	1122921.KB898212_gene2740	55.1	0.0000000165	N/A	N/A
KOfam	UHGV-1408813_39	K19304	99.9	3e-29	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-1408813_39	phrog_7767	95.5	3.4e-28	metallo-endopeptidase	other
UniRef90	UHGV-1408813_39	UniRef90_A0A1E1VI95	86.3	0.00000000000000102	Muramidase	N/A
eggNOG-mapper	UHGV-1408813_39	1158601.I585_02846	95.5	2.98e-18	Peptidase family M23	N/A
Pfam	UHGV-1408813_39	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
Pfam	UHGV-1408813_39	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
COG	UHGV-1408813_39	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-1408813_39	PF01551,PF09992,NF040883,COG0739,COG3698	N/A	N/A	N/A	N/A
PHROG	UHGV-1408813_40	phrog_4105	98.8	3.2e-29	N/A	unknown function
eggNOG-mapper	UHGV-1408813_40	397288.C806_00056	92.0	9.5e-23	N/A	N/A
PHROG	UHGV-1408813_42	phrog_13589	52.1	4.9e-25	N/A	unknown function
eggNOG-mapper	UHGV-1408813_42	411471.SUBVAR_06929	263.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-1408813_42	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
structural_annotation	UHGV-1408813_43	PF10651	N/A	N/A	N/A	N/A
KOfam	UHGV-1408813_45	K24485	44.3	0.00000000000078	FNDC3; fibronectin type III domain-containing protein 3	N/A
PHROG	UHGV-1408813_45	phrog_10993	271.9	0	Hoc-like head decoration	head and packaging
eggNOG-mapper	UHGV-1408813_45	1519439.JPJG01000059_gene1944	310.0	0	N/A	N/A
Pfam	UHGV-1408813_45	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-1408813_45	PF19789,PF05113,PF16323,PF21471,PF16578,NF033848,COG3500,COG3401	N/A	N/A	N/A	N/A
PHROG	UHGV-1408813_46	phrog_1194	83.3	2.3e-24	N/A	unknown function
eggNOG-mapper	UHGV-1408813_46	1122919.KB905559_gene1345	54.3	0.000000105	N/A	N/A
Pfam	UHGV-1408813_46	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1408813_46	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1408813_47	phrog_37543	69.6	4e-20	N/A	unknown function
eggNOG-mapper	UHGV-1408813_47	1123263.AUKY01000015_gene1620	125.0	2.83e-26	Phage tail tape measure protein TP901	N/A
COG	UHGV-1408813_47	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-1408813_48	1121333.JMLH01000047_gene1011	67.8	0.00000000000238	N/A	N/A
eggNOG-mapper	UHGV-1408813_49	1211844.CBLM010000023_gene988	60.1	0.000000000389	N/A	N/A
Pfam	UHGV-1408813_49	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-1408813_49	PF16478	N/A	N/A	N/A	N/A
UniRef90	UHGV-1408813_50	UniRef90_UPI001A9B3C90	90.9	1.51e-20	phage tail protein	N/A
structural_annotation	UHGV-1408813_50	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1408813_51	469596.HMPREF9488_01309	52.0	0.00000111	N/A	N/A
structural_annotation	UHGV-1408813_51	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1408813_53	1298920.KI911353_gene2656	74.3	0.00000000000000357	N/A	N/A
UniRef90	UHGV-1408813_54	UniRef90_UPI001D07B1DB	104.0	4.9e-27	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1408813_54	1298920.KI911353_gene2658	55.5	0.0000000145	N/A	N/A
structural_annotation	UHGV-1408813_54	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1408813_56	phrog_29	199.0	0	major head protein	head and packaging
UniRef90	UHGV-1408813_56	UniRef90_A0A2Z4QBB4	368.0	0	Major capsid protein E	N/A
eggNOG-mapper	UHGV-1408813_56	1232453.BAIF02000058_gene1628	249.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1408813_56	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1408813_56	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1408813_59	phrog_115	55.2	0.0000000000000014	minor head protein	head and packaging
eggNOG-mapper	UHGV-1408813_59	278197.PEPE_0506	64.7	0.000000000126	Phage Mu protein F like protein	N/A
Pfam	UHGV-1408813_59	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1408813_59	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
structural_annotation	UHGV-1408813_59	PF04233,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-1408813_60	phrog_64	197.4	0	portal protein	head and packaging
UniRef90	UHGV-1408813_60	UniRef90_A0A845RCM8	419.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1408813_60	1123263.AUKY01000015_gene1609	317.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1408813_60	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1408813_60	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1408813_62	phrog_38	167.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1408813_62	UniRef90_A0A843GZU6	590.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1408813_62	476272.RUMHYD_01940	432.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-1408813_62	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1408813_62	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1408813_62	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
UniRef90	UHGV-1408813_63	UniRef90_A0A521SZN7	81.3	7.05e-17	Ribonuclease H	N/A
eggNOG-mapper	UHGV-1408813_63	1123388.AQWU01000067_gene621	80.5	5.16e-17	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
COG	UHGV-1408813_63	COG0328	N/A	N/A	Ribonuclease HI	N/A
eggNOG-mapper	UHGV-1408813_64	1280663.ATVR01000009_gene2143	52.8	0.00000512	N/A	N/A
Pfam	UHGV-1408813_64	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
PHROG	UHGV-1408813_65	phrog_13890	50.9	0.000000000000013	N/A	unknown function
UniRef90	UHGV-1408813_65	UniRef90_UPI001D0A85B3	60.1	0.000000000617	N/A	N/A
structural_annotation	UHGV-1408813_65	COG4226	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1408813_67	PF02185,NF012003	N/A	N/A	N/A	N/A
UniRef90	UHGV-1408813_68	UniRef90_A0A6H1ZT64	60.1	0.000000204	LPD29 domain-containing protein	N/A
COG	UHGV-1408813_68	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
PHROG	UHGV-1408813_73	phrog_25567	44.9	0.0000000000015	N/A	unknown function
eggNOG-mapper	UHGV-1408813_73	888727.HMPREF9092_0491	53.9	0.0000000329	Helix-turn-helix	N/A
COG	UHGV-1408813_73	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-1408813_73	PF01381,NF040522,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1408813_74	phrog_31229	59.4	6.3e-17	N/A	unknown function
UniRef90	UHGV-1408813_74	UniRef90_A0A6G7WWS9	62.4	0.00000000229	Glycerol-3-phosphate acyltransferase	N/A
eggNOG-mapper	UHGV-1408813_74	1041504.RATSFB_0589	72.4	0.00000000000000738	N/A	N/A
UniRef90	UHGV-1408813_75	UniRef90_A0A1Y3X9H7	82.0	0.00000000000000568	Peptidase	N/A
eggNOG-mapper	UHGV-1408813_75	411467.BACCAP_02394	81.6	0.0000000000000013	Peptidase propeptide and YPEB domain	N/A
Pfam	UHGV-1408813_75	PF07833	N/A	N/A	Copper amine oxidase N-terminal domain	Cu_amine_oxidN1
COG	UHGV-1408813_75	COG3212	N/A	N/A	PepSY domain containing protein, regulator of zincin peptidase activity	N/A
structural_annotation	UHGV-1408813_75	PF07705,COG5633	N/A	N/A	N/A	N/A
KOfam	UHGV-1408813_76	K18830	53.5	0.0000000000000048	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1408813_76	phrog_8	44.4	0.000000000001	transcriptional regulator	transcription regulation
UniRef90	UHGV-1408813_76	UniRef90_A0A1Y4RX49	105.0	9.31e-27	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1408813_76	1235797.C816_03553	99.4	1.77e-24	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-1408813_76	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1408813_76	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1408813_76	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
Pfam	UHGV-1408813_79	PF07083	N/A	N/A	N/A	DUF1351
PHROG	UHGV-1408813_80	phrog_7838	139.6	2.50006e-41	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1408813_80	UniRef90_A0A8D9UGW3	195.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-1408813_80	742767.HMPREF9456_02397	196.0	0	N/A	N/A
structural_annotation	UHGV-1408813_80	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1408813_81	PF13744,TIGR03070,COG3655	N/A	N/A	N/A	N/A